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The map label for this gene is 93007225

Identifier: 93007225

GI number: 93007225

Start: 2954431

End: 2955546

Strand: Reverse

Name: 93007225

Synonym: Pcryo_2401

Alternate gene names: NA

Gene position: 2955546-2954431 (Counterclockwise)

Preceding gene: 93007226

Following gene: 93007224

Centisome position: 96.59

GC content: 41.4

Gene sequence:

>1116_bases
ATGAAAAAGACGTTAACCTTCGTTTGTGCTATCGCCACACCATTATTATTTAGCCAGTCTACTTTTGCTGCATTCGATTA
TTTTAAAACCGATGGTAGCTTTAAACGCTTTTCGGTCTCTGCTGGCTGGTTGCATGCCTCTCCACAAGGCACGGCCAATC
CTCTAGAAAATACGACAGCCATTAAAGATGGTACTGTCGCTAAAAACGGCAGTGTTAAAATAAAAACTGTCAGAGAGGTT
ATTGATCCTGATCAAAATGAGCTCACTAAAGTTAAAGTAAATACAGGCCTAACTGCTATAGGGGTAGTAAGCTTTAGAGG
TGAAGAAACTGATTTGTCTAGAACTACTCTAGGTGATGTATCAGGTCAAGTTAAGCTTGGCGGTTTAGAGAATTTCAGCA
GTCCAGGTACGGGTCTTGAGTCTGCTGATGTTGATACTTTTGGTTCGCTATTTAACTATTATCTAAATGATAACTGGTCA
ATTGAAGTCAAAGCCGGATTTCCTCCTAAAGTAGATATTATGGGTAAAGGGAAAGTGTATGCACCTATATCTGGTGAGGT
TACAGCTGGTGGAATAGGAGAATATGCACTACCAAAATTTAAAATTAAAAAAGAACAGCTTATAACCGATTTAGAACAAG
GTGATGGCGTGGCATCTAGGGCTCGCGCATGGCTACCGGCAGCGGGGGTGCAATATCAGTTTGGCAAATCTGGGGTCAAT
AAGTTTCGCCCTTATGTCGGTGCTGGGGTTATGTATGCCTATTTTAACGGTATTGAACTAAATGATGGTATTCGTAAAGA
TTTAGAGGCAGCTGGACATCAAATTCAGAATATCAAAGATGGTAAATCGGGTGCTGCGCTAGAAAATGTGCCATCCAATC
GAGAGATGAACGTGGATGTGGAGGCAGAAAGCGCTTTTGCACCTATCGTCACTGTTGGCGCTACTTATGATTTCAATGAT
AGATGGTTTGGAGTCGGGTCATTGTCTTATGCAAAACTGGACAGCGATACGACCATCACCGTTAAAAATGATAAGAATGA
AGAGTTGATTCGATCGAAAGCTCACCTCGATATAGATCCTTATATTACTTTCCTTGGCGTCGGCTATCGTTTCTAA

Upstream 100 bases:

>100_bases
TTGATTAACTTCATAGTGGCAATCTATCTGCTTTGTCTGATGACTACTGTGCCATTCATGTTTTTTATTAACGACCTGAA
TTTATTAACAAGGATGTTTC

Downstream 100 bases:

>100_bases
TAGAAGATTTATAGTAACTACAGAATAGTAGGATAAATATAGCGCACATTCTTAAGACTGTGTTTTTTGTCTTACGATCT
ACAAAAAGAATCTTGATGCT

Product: putative outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein W; Outer Membrane Protein; OmpW Family Outer Membrane Protein; Outer Membrane Protein OmpW; Outer Membrane Protein OmpW Family; Outer Membrane Protein OmpW Family Protein; Outer Membrane W Protein; Outer Membrane Protein-OmpW Family; Outer Membrane W Signal Peptide Protein; Outer Membrane Protein Ompw Family; OmpW Family Exported Protein; Lipoprotein

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKKTLTFVCAIATPLLFSQSTFAAFDYFKTDGSFKRFSVSAGWLHASPQGTANPLENTTAIKDGTVAKNGSVKIKTVREV
IDPDQNELTKVKVNTGLTAIGVVSFRGEETDLSRTTLGDVSGQVKLGGLENFSSPGTGLESADVDTFGSLFNYYLNDNWS
IEVKAGFPPKVDIMGKGKVYAPISGEVTAGGIGEYALPKFKIKKEQLITDLEQGDGVASRARAWLPAAGVQYQFGKSGVN
KFRPYVGAGVMYAYFNGIELNDGIRKDLEAAGHQIQNIKDGKSGAALENVPSNREMNVDVEAESAFAPIVTVGATYDFND
RWFGVGSLSYAKLDSDTTITVKNDKNEELIRSKAHLDIDPYITFLGVGYRF

Sequences:

>Translated_371_residues
MKKTLTFVCAIATPLLFSQSTFAAFDYFKTDGSFKRFSVSAGWLHASPQGTANPLENTTAIKDGTVAKNGSVKIKTVREV
IDPDQNELTKVKVNTGLTAIGVVSFRGEETDLSRTTLGDVSGQVKLGGLENFSSPGTGLESADVDTFGSLFNYYLNDNWS
IEVKAGFPPKVDIMGKGKVYAPISGEVTAGGIGEYALPKFKIKKEQLITDLEQGDGVASRARAWLPAAGVQYQFGKSGVN
KFRPYVGAGVMYAYFNGIELNDGIRKDLEAAGHQIQNIKDGKSGAALENVPSNREMNVDVEAESAFAPIVTVGATYDFND
RWFGVGSLSYAKLDSDTTITVKNDKNEELIRSKAHLDIDPYITFLGVGYRF
>Mature_371_residues
MKKTLTFVCAIATPLLFSQSTFAAFDYFKTDGSFKRFSVSAGWLHASPQGTANPLENTTAIKDGTVAKNGSVKIKTVREV
IDPDQNELTKVKVNTGLTAIGVVSFRGEETDLSRTTLGDVSGQVKLGGLENFSSPGTGLESADVDTFGSLFNYYLNDNWS
IEVKAGFPPKVDIMGKGKVYAPISGEVTAGGIGEYALPKFKIKKEQLITDLEQGDGVASRARAWLPAAGVQYQFGKSGVN
KFRPYVGAGVMYAYFNGIELNDGIRKDLEAAGHQIQNIKDGKSGAALENVPSNREMNVDVEAESAFAPIVTVGATYDFND
RWFGVGSLSYAKLDSDTTITVKNDKNEELIRSKAHLDIDPYITFLGVGYRF

Specific function: Unknown

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40116; Mature: 40116

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLTFVCAIATPLLFSQSTFAAFDYFKTDGSFKRFSVSAGWLHASPQGTANPLENTTA
CCCHHEEHHHHHHHHHHCCCHHHEEEEEECCCCEEEEEEECCEEECCCCCCCCCCCCCCE
IKDGTVAKNGSVKIKTVREVIDPDQNELTKVKVNTGLTAIGVVSFRGEETDLSRTTLGDV
ECCCCEECCCCEEEEEHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCEECCCC
SGQVKLGGLENFSSPGTGLESADVDTFGSLFNYYLNDNWSIEVKAGFPPKVDIMGKGKVY
CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCEEE
APISGEVTAGGIGEYALPKFKIKKEQLITDLEQGDGVASRARAWLPAAGVQYQFGKSGVN
ECCCCCEEECCCCCCCCCCEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCHH
KFRPYVGAGVMYAYFNGIELNDGIRKDLEAAGHQIQNIKDGKSGAALENVPSNREMNVDV
HHCHHHCCCEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEEEE
EAESAFAPIVTVGATYDFNDRWFGVGSLSYAKLDSDTTITVKNDKNEELIRSKAHLDIDP
ECCCCCCCEEEEEEEEECCCCEEECCCCEEEEECCCCEEEEECCCCHHHHHHHCCCCCCC
YITFLGVGYRF
EEEEEECCCCC
>Mature Secondary Structure
MKKTLTFVCAIATPLLFSQSTFAAFDYFKTDGSFKRFSVSAGWLHASPQGTANPLENTTA
CCCHHEEHHHHHHHHHHCCCHHHEEEEEECCCCEEEEEEECCEEECCCCCCCCCCCCCCE
IKDGTVAKNGSVKIKTVREVIDPDQNELTKVKVNTGLTAIGVVSFRGEETDLSRTTLGDV
ECCCCEECCCCEEEEEHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCEECCCC
SGQVKLGGLENFSSPGTGLESADVDTFGSLFNYYLNDNWSIEVKAGFPPKVDIMGKGKVY
CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCEEE
APISGEVTAGGIGEYALPKFKIKKEQLITDLEQGDGVASRARAWLPAAGVQYQFGKSGVN
ECCCCCEEECCCCCCCCCCEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCHH
KFRPYVGAGVMYAYFNGIELNDGIRKDLEAAGHQIQNIKDGKSGAALENVPSNREMNVDV
HHCHHHCCCEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEEEE
EAESAFAPIVTVGATYDFNDRWFGVGSLSYAKLDSDTTITVKNDKNEELIRSKAHLDIDP
ECCCCCCCEEEEEEEEECCCCEEECCCCEEEEECCCCEEEEECCCCHHHHHHHCCCCCCC
YITFLGVGYRF
EEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA