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The map label for this gene is mtrC [H]

Identifier: 93007224

GI number: 93007224

Start: 2952710

End: 2954032

Strand: Reverse

Name: mtrC [H]

Synonym: Pcryo_2400

Alternate gene names: 93007224

Gene position: 2954032-2952710 (Counterclockwise)

Preceding gene: 93007225

Following gene: 93007223

Centisome position: 96.54

GC content: 47.24

Gene sequence:

>1323_bases
ATGAGCGATGTTGAAGACAACAAGCTGCCAGTTGAATCTGAGCTACCCCCATACCGCCAATCTGATGCGCGAACGTCTAA
GCCTTTATCAGATAAGCCATTATCAAAATTTCCTTTATGGTTATTACCAGTATTGGCTATTGTGCTCGTTATTGGGGTAT
TGGTTGGTAAGTACTGGGGCAATGATGAGGAAGCGAGCAATGAGTCGCCCGTTGCTAACAATGTGCAAAACGATAGCGCT
AACCTAAAAGATGCTAGCATTGAGCAAGCTGTATTATCGGTCGAAACAGTGCTACCAAGCCAAGATAATATTGGTAATAC
GCTCAGTGCTGACGGAACCATCAATGCTAAGGATGTCGCTAATGTCAGTGCCAAAGTAAACGGCGTAGCGATTGAACGGA
TATTGGTCGAAGAAGGTCAGCGTGTTAAAGCTGGTCAAATACTGGCTGTATTTGATACCGACGCGATGGAGCAGCAAGTC
TTGCAAGCAGAAGCTGATGTTGCCGAAGCAAAAGCGACGCTTGCCAATGCCACTGCCGATGCCGCCCGCGTCCTGCCACT
TATTGATATTGATGCCATTAGCAAGCAAGAAGCGGATCGCTATCGTACGGCTAAACTACAAGCGCAGGCGTCACTGCAAG
CCTCTAAAGCTCGACTGAGTACGCAGCGCTTGAGTGTCAATAATGCCAATGTGGTTGCACCGGTTAGCGGTATTATTAGT
GAAAAAATGGCTGAAGTTGGTATGATTGCTGGTGGAGACCCACTATTTACTATTATCAAAGGTGGTATTTTGGAATGGCG
TGCGGATATCGATCCTAAGCTGATTGGTGAGGTTAATGTTGGCACACCAGTCCAAGTTAGCCTACCGGGCGGCGATTCTG
TCATGGGGGAGGTCAGTCGCATTGCACCAACTGCTGATAATAATAGGCAAATTACCATTTATGCTAGCCTTGCTGCTAAC
GCGAAAGTAAGAGCAGGCATGTATCAAACGGGCGAGTTTTTATTGGGTAGTAGCAGCGCTCAAACGGTTCCTAATAGCGC
CATTGTCAGCAATGACGGCTATGACTATGTGATGCTAGTGACCAATATCAGTACTAAAGACGGTAAAAACGGTCACAACA
TTGGCCGTATCAAACAACAACGTGTGACCCTTGGTGAGCGCTTTGGCGATAGTATTATGCTCACAGAGCCACTCCCTGCA
GAGAGCCGACTTGTAAAGCAAGGGGGAAGCTTTTTAAATAATGGTGACTTGGTACGTGTCGTTGATGGTCTGAGTCAAAC
TGGTAAGCAGGCTACTAGCACAGACACGCAGGCGCGCTCATGA

Upstream 100 bases:

>100_bases
ATATAAAGATGCTCGTTTAACGTAATGCTAGCCTATTTTCACCTATTATTTTCCTCATATTATATATCCTTATTATTGCC
TGTATTGACAGAGAGTTATC

Downstream 100 bases:

>100_bases
GTTTAAATGTTTCCGCCTACTCGATTAAAAATCCATTAGTGGCTATCTTGCTGTTTGTACTGCTCACCTTAGGCGGTATC
TATGGCTTTATGCAAATGAA

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSDVEDNKLPVESELPPYRQSDARTSKPLSDKPLSKFPLWLLPVLAIVLVIGVLVGKYWGNDEEASNESPVANNVQNDSA
NLKDASIEQAVLSVETVLPSQDNIGNTLSADGTINAKDVANVSAKVNGVAIERILVEEGQRVKAGQILAVFDTDAMEQQV
LQAEADVAEAKATLANATADAARVLPLIDIDAISKQEADRYRTAKLQAQASLQASKARLSTQRLSVNNANVVAPVSGIIS
EKMAEVGMIAGGDPLFTIIKGGILEWRADIDPKLIGEVNVGTPVQVSLPGGDSVMGEVSRIAPTADNNRQITIYASLAAN
AKVRAGMYQTGEFLLGSSSAQTVPNSAIVSNDGYDYVMLVTNISTKDGKNGHNIGRIKQQRVTLGERFGDSIMLTEPLPA
ESRLVKQGGSFLNNGDLVRVVDGLSQTGKQATSTDTQARS

Sequences:

>Translated_440_residues
MSDVEDNKLPVESELPPYRQSDARTSKPLSDKPLSKFPLWLLPVLAIVLVIGVLVGKYWGNDEEASNESPVANNVQNDSA
NLKDASIEQAVLSVETVLPSQDNIGNTLSADGTINAKDVANVSAKVNGVAIERILVEEGQRVKAGQILAVFDTDAMEQQV
LQAEADVAEAKATLANATADAARVLPLIDIDAISKQEADRYRTAKLQAQASLQASKARLSTQRLSVNNANVVAPVSGIIS
EKMAEVGMIAGGDPLFTIIKGGILEWRADIDPKLIGEVNVGTPVQVSLPGGDSVMGEVSRIAPTADNNRQITIYASLAAN
AKVRAGMYQTGEFLLGSSSAQTVPNSAIVSNDGYDYVMLVTNISTKDGKNGHNIGRIKQQRVTLGERFGDSIMLTEPLPA
ESRLVKQGGSFLNNGDLVRVVDGLSQTGKQATSTDTQARS
>Mature_439_residues
SDVEDNKLPVESELPPYRQSDARTSKPLSDKPLSKFPLWLLPVLAIVLVIGVLVGKYWGNDEEASNESPVANNVQNDSAN
LKDASIEQAVLSVETVLPSQDNIGNTLSADGTINAKDVANVSAKVNGVAIERILVEEGQRVKAGQILAVFDTDAMEQQVL
QAEADVAEAKATLANATADAARVLPLIDIDAISKQEADRYRTAKLQAQASLQASKARLSTQRLSVNNANVVAPVSGIISE
KMAEVGMIAGGDPLFTIIKGGILEWRADIDPKLIGEVNVGTPVQVSLPGGDSVMGEVSRIAPTADNNRQITIYASLAANA
KVRAGMYQTGEFLLGSSSAQTVPNSAIVSNDGYDYVMLVTNISTKDGKNGHNIGRIKQQRVTLGERFGDSIMLTEPLPAE
SRLVKQGGSFLNNGDLVRVVDGLSQTGKQATSTDTQARS

Specific function: Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=166, Percent_Identity=33.1325301204819, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1789929, Length=256, Percent_Identity=25.390625, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 46658; Mature: 46527

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVEDNKLPVESELPPYRQSDARTSKPLSDKPLSKFPLWLLPVLAIVLVIGVLVGKYWG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCC
NDEEASNESPVANNVQNDSANLKDASIEQAVLSVETVLPSQDNIGNTLSADGTINAKDVA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHH
NVSAKVNGVAIERILVEEGQRVKAGQILAVFDTDAMEQQVLQAEADVAEAKATLANATAD
CCHHCCCCHHHHHHHHHCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHH
AARVLPLIDIDAISKQEADRYRTAKLQAQASLQASKARLSTQRLSVNNANVVAPVSGIIS
HHHCCEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECHHHHHH
EKMAEVGMIAGGDPLFTIIKGGILEWRADIDPKLIGEVNVGTPVQVSLPGGDSVMGEVSR
HHHHHHCEECCCCHHHHHHHCCEEEEECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHH
IAPTADNNRQITIYASLAANAKVRAGMYQTGEFLLGSSSAQTVPNSAIVSNDGYDYVMLV
HCCCCCCCCEEEEEEEECCCCEEECCCEECCCEEECCCCCCCCCCCEEEECCCCCEEEEE
TNISTKDGKNGHNIGRIKQQRVTLGERFGDSIMLTEPLPAESRLVKQGGSFLNNGDLVRV
EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEEE
VDGLSQTGKQATSTDTQARS
EHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDVEDNKLPVESELPPYRQSDARTSKPLSDKPLSKFPLWLLPVLAIVLVIGVLVGKYWG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCC
NDEEASNESPVANNVQNDSANLKDASIEQAVLSVETVLPSQDNIGNTLSADGTINAKDVA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHH
NVSAKVNGVAIERILVEEGQRVKAGQILAVFDTDAMEQQVLQAEADVAEAKATLANATAD
CCHHCCCCHHHHHHHHHCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHH
AARVLPLIDIDAISKQEADRYRTAKLQAQASLQASKARLSTQRLSVNNANVVAPVSGIIS
HHHCCEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECHHHHHH
EKMAEVGMIAGGDPLFTIIKGGILEWRADIDPKLIGEVNVGTPVQVSLPGGDSVMGEVSR
HHHHHHCEECCCCHHHHHHHCCEEEEECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHH
IAPTADNNRQITIYASLAANAKVRAGMYQTGEFLLGSSSAQTVPNSAIVSNDGYDYVMLV
HCCCCCCCCEEEEEEEECCCCEEECCCEECCCEEECCCCCCCCCCCEEEECCCCCEEEEE
TNISTKDGKNGHNIGRIKQQRVTLGERFGDSIMLTEPLPAESRLVKQGGSFLNNGDLVRV
EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEEE
VDGLSQTGKQATSTDTQARS
EHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8196548 [H]