| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93007142
Identifier: 93007142
GI number: 93007142
Start: 2847490
End: 2848047
Strand: Direct
Name: 93007142
Synonym: Pcryo_2318
Alternate gene names: NA
Gene position: 2847490-2848047 (Clockwise)
Preceding gene: 93007139
Following gene: 93007147
Centisome position: 93.06
GC content: 40.86
Gene sequence:
>558_bases ATGAGTTTACTACCCAAAAATCTTGAGACGCTAAAACGTAACGCTAAAAAAAATATTATGCCATTGCTCACGCCTTATCT GCTCAAGCTACGTATCAACACTTATGCACCTTATATCGGTGCCGGCATCAAGATTGAGCATATAAACCTTGACCAAGGTT TATGTGTGGTCAATATGGGACTAAATAGTCTAAATAAGAACATTGTAGGGACACAGTTTGGCGGCAGCTTATATTCAATG GTTGATCCATTTTATATGCTCATGCTCATGCATCAACTGGGTAGCAGTTACGTCGTTTGGGATAAAAGCTCACATATTGA ATTTATCGCGCCGGGCAATAGCAAAGTTACTGCTCGCATGAAAATCCCTAGCAGTGAGATTAAAGCCATTCAAGAGCTGG CAAAAGAGGGTGAACCCGTCTTTCGTGAATACCAAGTAGATATCGTGGACGATCAGCAAAAGATCATCGCTATCGTCACC AAGACGCTATACATACGCTTGCGTAAGTACAGCAAATCTAAAGACCAAAACAGCCGTATTGAAAATCTCGATGATTAA
Upstream 100 bases:
>100_bases CTAGCGCCTTTATAAGTTTTTCACTATGATAAATACCTTTTTACCCATAACGATTGAATAATAGCAGTCTAAAAATCAAG AAGTTCCCTAGGATAAGTTT
Downstream 100 bases:
>100_bases AGGCAACGTTTAAAGCTTTAATTTAAGTCTGTGATTTAAAGCGACAGAAACAAAAACCCCAATCTGGCATTCGCACAGAT TGGGGTTTTGTCTTTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSLLPKNLETLKRNAKKNIMPLLTPYLLKLRINTYAPYIGAGIKIEHINLDQGLCVVNMGLNSLNKNIVGTQFGGSLYSM VDPFYMLMLMHQLGSSYVVWDKSSHIEFIAPGNSKVTARMKIPSSEIKAIQELAKEGEPVFREYQVDIVDDQQKIIAIVT KTLYIRLRKYSKSKDQNSRIENLDD
Sequences:
>Translated_185_residues MSLLPKNLETLKRNAKKNIMPLLTPYLLKLRINTYAPYIGAGIKIEHINLDQGLCVVNMGLNSLNKNIVGTQFGGSLYSM VDPFYMLMLMHQLGSSYVVWDKSSHIEFIAPGNSKVTARMKIPSSEIKAIQELAKEGEPVFREYQVDIVDDQQKIIAIVT KTLYIRLRKYSKSKDQNSRIENLDD >Mature_184_residues SLLPKNLETLKRNAKKNIMPLLTPYLLKLRINTYAPYIGAGIKIEHINLDQGLCVVNMGLNSLNKNIVGTQFGGSLYSMV DPFYMLMLMHQLGSSYVVWDKSSHIEFIAPGNSKVTARMKIPSSEIKAIQELAKEGEPVFREYQVDIVDDQQKIIAIVTK TLYIRLRKYSKSKDQNSRIENLDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21037; Mature: 20906
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLPKNLETLKRNAKKNIMPLLTPYLLKLRINTYAPYIGAGIKIEHINLDQGLCVVNMG CCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCEECCCEEEEEEECCCCEEEEECC LNSLNKNIVGTQFGGSLYSMVDPFYMLMLMHQLGSSYVVWDKSSHIEFIAPGNSKVTARM CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCEEEEEE KIPSSEIKAIQELAKEGEPVFREYQVDIVDDQQKIIAIVTKTLYIRLRKYSKSKDQNSRI ECCHHHHHHHHHHHHCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ENLDD CCCCC >Mature Secondary Structure SLLPKNLETLKRNAKKNIMPLLTPYLLKLRINTYAPYIGAGIKIEHINLDQGLCVVNMG CCCCHHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCEECCCEEEEEEECCCCEEEEECC LNSLNKNIVGTQFGGSLYSMVDPFYMLMLMHQLGSSYVVWDKSSHIEFIAPGNSKVTARM CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCEEEEEE KIPSSEIKAIQELAKEGEPVFREYQVDIVDDQQKIIAIVTKTLYIRLRKYSKSKDQNSRI ECCHHHHHHHHHHHHCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ENLDD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA