| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is folA [H]
Identifier: 93007139
GI number: 93007139
Start: 2842834
End: 2843406
Strand: Direct
Name: folA [H]
Synonym: Pcryo_2315
Alternate gene names: 93007139
Gene position: 2842834-2843406 (Clockwise)
Preceding gene: 93007138
Following gene: 93007142
Centisome position: 92.91
GC content: 43.8
Gene sequence:
>573_bases ATGAGTTATGCCAACACCGAAGTTGCCCAAATCGCGGCTATCAGTAGCAATCGCTGTATTGGTAAAGACAATGAGCTACC GTGGCATATCTCAGCCGATTTGCAGCATTTTAAAAGTATGACAACCAAACCAAATGACGGTGCGATACAGGGTATCGTGA TTATGGGTCGCAAGACCTTTGAGTCAATGGGCAGCAAGCCGTTACCTAAACGTGTGAGCTTTATTATCAGTAGCCAGATA GATTATGCTGAGCAAAAAGGCTTGGTAGGTAGTGAAAAAGCTTATGTAATGCATAATTTAGACGATGCCTTAACCCAAGC AGCAAGCCTAGCGCATGGTGCGCATCTTGATACGATTTGGGTAATTGGTGGCGAGCGCGTGTTTAGCGATGCATTGCTGT ACACCGACCGTATCGAACTCACTCACGTCGATACTGAAATCGTTGATGGCGATGCCTTTTATCCTGAGCTGCCAAGTGAG TTTGAAGTTGCGCAAGAATCTGAGCAAATGCATGATGAAAAAAGCGCGTTAGATTTTAGATTTGTGACTTATAAAAGAAA AAACGCTGAATAA
Upstream 100 bases:
>100_bases GGCTATGAGTCTCATCCAGCGATTAAGGCACAAGTTGCGGTATAGCGCCTGTTTATTCAATTGTATTTAAATATATTTAA ACATTAGCAAAGGATAATTT
Downstream 100 bases:
>100_bases TAGTAAAATTTTAAACAAAACGTAAAAAGAGGCTATCCTAAATAACTCTAGGACAGCCTCTTTTTTCATGTTCAAACTTT ATGAACATAAACCTAAATTT
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSYANTEVAQIAAISSNRCIGKDNELPWHISADLQHFKSMTTKPNDGAIQGIVIMGRKTFESMGSKPLPKRVSFIISSQI DYAEQKGLVGSEKAYVMHNLDDALTQAASLAHGAHLDTIWVIGGERVFSDALLYTDRIELTHVDTEIVDGDAFYPELPSE FEVAQESEQMHDEKSALDFRFVTYKRKNAE
Sequences:
>Translated_190_residues MSYANTEVAQIAAISSNRCIGKDNELPWHISADLQHFKSMTTKPNDGAIQGIVIMGRKTFESMGSKPLPKRVSFIISSQI DYAEQKGLVGSEKAYVMHNLDDALTQAASLAHGAHLDTIWVIGGERVFSDALLYTDRIELTHVDTEIVDGDAFYPELPSE FEVAQESEQMHDEKSALDFRFVTYKRKNAE >Mature_189_residues SYANTEVAQIAAISSNRCIGKDNELPWHISADLQHFKSMTTKPNDGAIQGIVIMGRKTFESMGSKPLPKRVSFIISSQID YAEQKGLVGSEKAYVMHNLDDALTQAASLAHGAHLDTIWVIGGERVFSDALLYTDRIELTHVDTEIVDGDAFYPELPSEF EVAQESEQMHDEKSALDFRFVTYKRKNAE
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=154, Percent_Identity=31.1688311688312, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI28827793, Length=152, Percent_Identity=29.6052631578947, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786233, Length=182, Percent_Identity=32.967032967033, Blast_Score=83, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17505899, Length=185, Percent_Identity=30.2702702702703, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324810, Length=148, Percent_Identity=30.4054054054054, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI116008026, Length=164, Percent_Identity=29.8780487804878, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647458, Length=164, Percent_Identity=29.8780487804878, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 21198; Mature: 21067
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYANTEVAQIAAISSNRCIGKDNELPWHISADLQHFKSMTTKPNDGAIQGIVIMGRKTF CCCCCCCHHHEEEECCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEEEEECCHHH ESMGSKPLPKRVSFIISSQIDYAEQKGLVGSEKAYVMHNLDDALTQAASLAHGAHLDTIW HHCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEE VIGGERVFSDALLYTDRIELTHVDTEIVDGDAFYPELPSEFEVAQESEQMHDEKSALDFR EECCCHHHHHHHEEECCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEE FVTYKRKNAE EEEEECCCCC >Mature Secondary Structure SYANTEVAQIAAISSNRCIGKDNELPWHISADLQHFKSMTTKPNDGAIQGIVIMGRKTF CCCCCCHHHEEEECCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEEEEECCHHH ESMGSKPLPKRVSFIISSQIDYAEQKGLVGSEKAYVMHNLDDALTQAASLAHGAHLDTIW HHCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEE VIGGERVFSDALLYTDRIELTHVDTEIVDGDAFYPELPSEFEVAQESEQMHDEKSALDFR EECCCHHHHHHHEEECCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEE FVTYKRKNAE EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]