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The map label for this gene is 93006869

Identifier: 93006869

GI number: 93006869

Start: 2512220

End: 2512879

Strand: Reverse

Name: 93006869

Synonym: Pcryo_2045

Alternate gene names: NA

Gene position: 2512879-2512220 (Counterclockwise)

Preceding gene: 93006870

Following gene: 93006868

Centisome position: 82.12

GC content: 45.45

Gene sequence:

>660_bases
ATGACAAGTAAACAGTATAACTATAGCGGTTGGACAGCTTTTAGTATCGCCACTTTGCTACTGTTGCAAGGGACAATGGC
TATGTCTGCCCAAGCGGCTAACGCGAGTAAAAGTGGTCATCGCGTGCTGATGATTGAGATGACACCAGCATTATGTAACT
TGCAACCAACGCGTTCACGTATGCGTCAGTGTCTCGAAGGCTATTCTTTGACTGTGTCAGGTTTAGACATGGGTTATGGG
GAAAGCTGCGGACGTGGTAGTGAACCGCGTATCACACCGCTACAGCTAAAAGTCGTCAACCGTATTATGCCCGATACCAC
AGTGCGTACCCAAGCGTGGCAACGTTATGGCGCTTGTAGTCCATTAAGCTCCAGTAATTACTTCCGCCAAATCACTAACT
ATGCGGGCGCTCTCAAGCTGCCAAATGAGCTAAACACGGGCAATAGTTATACGGTATTAAAATCTCGTTTTATCGGTCAA
ATGACCAGCTTAAATAGTGGTATGACTCCTGCTAGTGTCGATCTGATTTGTCAGGCAGGTACGCAACGTCAAATGATATT
GACGGATGTACATGTCTGTTATGAAGGCAGTGAATTTGGCAACTGTCATAATGTCGTGGACAATTGTGGCAGTAAATTCG
TTATTTCAGGCGGTAAATAA

Upstream 100 bases:

>100_bases
AATCTGCCTATATCGTTGCACGCTAGGCATCGGTTAACTCTTTAAACCAAACTGGGCTTGATGCCAAAAAACAGTGATAT
CAGAGTACGTAAGTGACAAT

Downstream 100 bases:

>100_bases
TCCGTCTTTGTCTGGTTTGATTATCTCTCCTTTTACATCGCATACCCTACGTTTAACCTATTTCTATCCTGCTATATAAA
TTGCAAATATATCATCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTSKQYNYSGWTAFSIATLLLLQGTMAMSAQAANASKSGHRVLMIEMTPALCNLQPTRSRMRQCLEGYSLTVSGLDMGYG
ESCGRGSEPRITPLQLKVVNRIMPDTTVRTQAWQRYGACSPLSSSNYFRQITNYAGALKLPNELNTGNSYTVLKSRFIGQ
MTSLNSGMTPASVDLICQAGTQRQMILTDVHVCYEGSEFGNCHNVVDNCGSKFVISGGK

Sequences:

>Translated_219_residues
MTSKQYNYSGWTAFSIATLLLLQGTMAMSAQAANASKSGHRVLMIEMTPALCNLQPTRSRMRQCLEGYSLTVSGLDMGYG
ESCGRGSEPRITPLQLKVVNRIMPDTTVRTQAWQRYGACSPLSSSNYFRQITNYAGALKLPNELNTGNSYTVLKSRFIGQ
MTSLNSGMTPASVDLICQAGTQRQMILTDVHVCYEGSEFGNCHNVVDNCGSKFVISGGK
>Mature_218_residues
TSKQYNYSGWTAFSIATLLLLQGTMAMSAQAANASKSGHRVLMIEMTPALCNLQPTRSRMRQCLEGYSLTVSGLDMGYGE
SCGRGSEPRITPLQLKVVNRIMPDTTVRTQAWQRYGACSPLSSSNYFRQITNYAGALKLPNELNTGNSYTVLKSRFIGQM
TSLNSGMTPASVDLICQAGTQRQMILTDVHVCYEGSEFGNCHNVVDNCGSKFVISGGK

Specific function: Unknown

COG id: COG3719

COG function: function code J; Ribonuclease I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23882; Mature: 23750

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKQYNYSGWTAFSIATLLLLQGTMAMSAQAANASKSGHRVLMIEMTPALCNLQPTRSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHCCCHHHHH
MRQCLEGYSLTVSGLDMGYGESCGRGSEPRITPLQLKVVNRIMPDTTVRTQAWQRYGACS
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PLSSSNYFRQITNYAGALKLPNELNTGNSYTVLKSRFIGQMTSLNSGMTPASVDLICQAG
CCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEECCC
TQRQMILTDVHVCYEGSEFGNCHNVVDNCGSKFVISGGK
CCCEEEEEEEEEEECCCCCCCHHHHHHCCCCEEEEECCC
>Mature Secondary Structure 
TSKQYNYSGWTAFSIATLLLLQGTMAMSAQAANASKSGHRVLMIEMTPALCNLQPTRSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHCCCHHHHH
MRQCLEGYSLTVSGLDMGYGESCGRGSEPRITPLQLKVVNRIMPDTTVRTQAWQRYGACS
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PLSSSNYFRQITNYAGALKLPNELNTGNSYTVLKSRFIGQMTSLNSGMTPASVDLICQAG
CCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEECCC
TQRQMILTDVHVCYEGSEFGNCHNVVDNCGSKFVISGGK
CCCEEEEEEEEEEECCCCCCCHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA