Click here to switch to the map view.

The map label for this gene is ybiS [C]

Identifier: 93006686

GI number: 93006686

Start: 2299966

End: 2300481

Strand: Reverse

Name: ybiS [C]

Synonym: Pcryo_1862

Alternate gene names: 93006686

Gene position: 2300481-2299966 (Counterclockwise)

Preceding gene: 93006688

Following gene: 93006683

Centisome position: 75.18

GC content: 42.44

Gene sequence:

>516_bases
ATGACAGATAACGGAAATCTTACGACCCAGATAGTGATTAGCATTGCTCAGCAAACTTTGACCGTTTATAGGCGGCAAAA
AGTTATTGCTGAATATCCTATATCAACAGCCAAAAATGGGATAGGCAGTCAACAAGACAGTGGTTGTACACCACTTGGTC
AGCATATCATTGCAGAAAAAATAGGCGGCAATGCGCCAAGTCATACGGTATTTATTGGACGTATAGCGACGGGAGAAATA
TATAATGCTGAGCTTGGGGCATTGAACCCTAAACGTGATTGGATACTAAGCCGCATTCTTTGGCTAAGTGGTCTTGAGGA
AGGCTTTAATAAAGGCAGTAATAGTCAAGGTGGCTGCGATACTTATCATCGCTATATCTATATTCATGGAACACCTGACA
GTGAGCCGATGAGCGTGCCACTCTCACATGGCTGTATACGTATGCGCAATCAAGATATTATCGAATTGTTTGAGCAGATT
GAGGAAGGGACAGCAGTGAATATTATCGCCCAATAA

Upstream 100 bases:

>100_bases
ACTCCAGAGGCTTCGCAAAATTTATCCAAGCAGTACTGTATTCTTTTTAAATTGAATCGACTATAACAGCCATCATCGAT
ATAACTGCCGGAAAATTGCT

Downstream 100 bases:

>100_bases
AAGTAGTATTAAGTAGCTGTAGTAGTAATGTATGGATTATAAATTGAGTCGACGATATAAAAAAGACAACCCTTATTCAG
TGAGCTGTCTTTTTCTCTAA

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Superfamily; ErfK/SrfK Family Protein; ErfK/YbiS/YcfS/YnhG Protein

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTDNGNLTTQIVISIAQQTLTVYRRQKVIAEYPISTAKNGIGSQQDSGCTPLGQHIIAEKIGGNAPSHTVFIGRIATGEI
YNAELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCDTYHRYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQI
EEGTAVNIIAQ

Sequences:

>Translated_171_residues
MTDNGNLTTQIVISIAQQTLTVYRRQKVIAEYPISTAKNGIGSQQDSGCTPLGQHIIAEKIGGNAPSHTVFIGRIATGEI
YNAELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCDTYHRYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQI
EEGTAVNIIAQ
>Mature_170_residues
TDNGNLTTQIVISIAQQTLTVYRRQKVIAEYPISTAKNGIGSQQDSGCTPLGQHIIAEKIGGNAPSHTVFIGRIATGEIY
NAELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCDTYHRYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQIE
EGTAVNIIAQ

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18756; Mature: 18625

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNGNLTTQIVISIAQQTLTVYRRQKVIAEYPISTAKNGIGSQQDSGCTPLGQHIIAEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHH
IGGNAPSHTVFIGRIATGEIYNAELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCD
HCCCCCCCEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TYHRYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQIEEGTAVNIIAQ
CEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure 
TDNGNLTTQIVISIAQQTLTVYRRQKVIAEYPISTAKNGIGSQQDSGCTPLGQHIIAEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHH
IGGNAPSHTVFIGRIATGEIYNAELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCD
HCCCCCCCEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TYHRYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQIEEGTAVNIIAQ
CEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA