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The map label for this gene is yagT [H]

Identifier: 93006633

GI number: 93006633

Start: 2233719

End: 2234402

Strand: Reverse

Name: yagT [H]

Synonym: Pcryo_1809

Alternate gene names: 93006633

Gene position: 2234402-2233719 (Counterclockwise)

Preceding gene: 93006634

Following gene: 93006632

Centisome position: 73.02

GC content: 43.42

Gene sequence:

>684_bases
ATGTCTAATTTAATGTTAACAATTAATCAGCAGGATTATGAGTTTGATAATCTTGACCCGCGAACGACATTGCTGGATGT
ATGTCGTCACCATCTACATATCACAGGACCAAAAAAAGGCTGCGATCATGGGCAATGCGGCGCTTGTACTATGATTATTA
ATGGTCGACGAATCAATTCTTGTTTGACATTAGCGGTCATGCACGATGGTGATGAGATTACCACCATTGAAGGTATCGGA
CTACCTGAATCGCTATCAGAATTGCAACAGGCCTTTAAAGACCATGATGCCTTTCAATGTGGCTATTGCACGCCGGGACA
AATTTGTTCTGCAACGGCATTGATAGAGGAAATCAAACAACAGTGGCCAAGTCATGTGACTACTGATCTGCAAAATCCTA
ATGGACTGCTAGTACAAGAAATTTCTGAGCGCATGAGTGGTAATATCTGTCGCTGTTCAGCCTATCCTAATATTATCAAA
GCCATCTCACAGGTGCTCGAAAATCAACAAGTATCAAACTCTTCTTCAGTGACCGACGATGCGCCTAATAATAGCCCAGC
CAGTGTAGCTATTAGTGGTATTTGGTCGCCGCCGCCTAGCGAGGCACAAATTGGCGGTCATTCAATGGTAAAGCAAACTG
CTAATGTTCCCAATGCTGCCAGTGCTAAGGGAGAACGTTTATGA

Upstream 100 bases:

>100_bases
TCCGAAAAATACAACAGCATTAACAGTTAACATTTAATCTATAGACTAGTTACAAGACCTAATCTAATATTTTATTATCT
TTTGCCAGCGAGAAGCCAGC

Downstream 100 bases:

>100_bases
AACGCTTTGAATATATTCGTGTCCTCGAACCGCAACAAGCCGTGATGTTTGCCACGCCTGAGGATGCATCTTTTATTGCC
GGTGGCACCAATTTACTAGA

Product: (2Fe-2S)-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSNLMLTINQQDYEFDNLDPRTTLLDVCRHHLHITGPKKGCDHGQCGACTMIINGRRINSCLTLAVMHDGDEITTIEGIG
LPESLSELQQAFKDHDAFQCGYCTPGQICSATALIEEIKQQWPSHVTTDLQNPNGLLVQEISERMSGNICRCSAYPNIIK
AISQVLENQQVSNSSSVTDDAPNNSPASVAISGIWSPPPSEAQIGGHSMVKQTANVPNAASAKGERL

Sequences:

>Translated_227_residues
MSNLMLTINQQDYEFDNLDPRTTLLDVCRHHLHITGPKKGCDHGQCGACTMIINGRRINSCLTLAVMHDGDEITTIEGIG
LPESLSELQQAFKDHDAFQCGYCTPGQICSATALIEEIKQQWPSHVTTDLQNPNGLLVQEISERMSGNICRCSAYPNIIK
AISQVLENQQVSNSSSVTDDAPNNSPASVAISGIWSPPPSEAQIGGHSMVKQTANVPNAASAKGERL
>Mature_226_residues
SNLMLTINQQDYEFDNLDPRTTLLDVCRHHLHITGPKKGCDHGQCGACTMIINGRRINSCLTLAVMHDGDEITTIEGIGL
PESLSELQQAFKDHDAFQCGYCTPGQICSATALIEEIKQQWPSHVTTDLQNPNGLLVQEISERMSGNICRCSAYPNIIKA
ISQVLENQQVSNSSSVTDDAPNNSPASVAISGIWSPPPSEAQIGGHSMVKQTANVPNAASAKGERL

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786480, Length=159, Percent_Identity=60.377358490566, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1789232, Length=156, Percent_Identity=35.8974358974359, Blast_Score=99, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17540638, Length=171, Percent_Identity=33.9181286549708, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32566215, Length=172, Percent_Identity=28.4883720930233, Blast_Score=91, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17539860, Length=171, Percent_Identity=27.4853801169591, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI17737937, Length=174, Percent_Identity=32.7586206896552, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24647199, Length=193, Percent_Identity=29.5336787564767, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24647197, Length=190, Percent_Identity=29.4736842105263, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24647195, Length=190, Percent_Identity=29.4736842105263, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24647201, Length=181, Percent_Identity=29.2817679558011, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24647193, Length=170, Percent_Identity=28.8235294117647, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 24542; Mature: 24411

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLMLTINQQDYEFDNLDPRTTLLDVCRHHLHITGPKKGCDHGQCGACTMIINGRRINS
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEECCCEECC
CLTLAVMHDGDEITTIEGIGLPESLSELQQAFKDHDAFQCGYCTPGQICSATALIEEIKQ
EEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH
QWPSHVTTDLQNPNGLLVQEISERMSGNICRCSAYPNIIKAISQVLENQQVSNSSSVTDD
HCCCHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
APNNSPASVAISGIWSPPPSEAQIGGHSMVKQTANVPNAASAKGERL
CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNLMLTINQQDYEFDNLDPRTTLLDVCRHHLHITGPKKGCDHGQCGACTMIINGRRINS
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEECCCEECC
CLTLAVMHDGDEITTIEGIGLPESLSELQQAFKDHDAFQCGYCTPGQICSATALIEEIKQ
EEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH
QWPSHVTTDLQNPNGLLVQEISERMSGNICRCSAYPNIIKAISQVLENQQVSNSSSVTDD
HCCCHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
APNNSPASVAISGIWSPPPSEAQIGGHSMVKQTANVPNAASAKGERL
CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]