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The map label for this gene is yagS [H]

Identifier: 93006632

GI number: 93006632

Start: 2232730

End: 2233722

Strand: Reverse

Name: yagS [H]

Synonym: Pcryo_1808

Alternate gene names: 93006632

Gene position: 2233722-2232730 (Counterclockwise)

Preceding gene: 93006633

Following gene: 93006631

Centisome position: 73.0

GC content: 46.83

Gene sequence:

>993_bases
ATGAAACGCTTTGAATATATTCGTGTCCTCGAACCGCAACAAGCCGTGATGTTTGCCACGCCTGAGGATGCATCTTTTAT
TGCCGGTGGCACCAATTTACTAGATTTAATGAAGATTGAGATTGAGACTCCTCAAAAATTGGTTGATATTACGCGCTTAG
AGCTGCAACAAATAGAGGCTACTGCTGATGGTGGGTTACGCATCGGCACGCTGGTGACGAACAGTGATTTGGCTGCGCAC
CCAGCGGTTACGGCAGGCTACCCTGTATTAGCTCGGGCGATGCTAGCAGGGGCTTCAGGACAATTGCGTAATAAAGCGAC
CACAGGCGGCAATCTATTACAACGCACCCGTTGTTACTACTTTTATCAGCCCGATAGTCCTTGTAATAAACGCAATCCTG
GTTCTGGTTGTCCCGCTATTAAAGGTGAAAATCGTCCGCTTGCTGTCTTAGGAACGAGTGATGATTGTATTGCTCAGCAC
CCATCAGATATGGCGGTAGCGATGCGCTTACTCGATGCCACTATTGAGACGCTCAAAGCAGACGGCACCTCGCGCCAGAT
TCCGATTAAAGACTTCTATTGCTTGCCAAAAGACACGCCAAATATCGAAACTGTCTTAGAGACAGGGGAGCTGATTACTC
ATATTGTTCTCCCAGCTCCAGTGAAAGGCATGCACACTTATGACAAAGTTCGTGATCGCGCCTCTTACGCCTTTGCTTTA
GTGTCATGTGCGGCCGTAATAAACGTCAATAATCAAGGAAAATTAGAAACGGTACGTTTGGCATTTGGTGGTATTGGCAC
TAAGCCTTGGCGTAATGAAGCGGTTGAAGCATTACTCATAGGTACAGACGGTAACGTCAACATTATTTCGCAAGCGGCAG
ATTTGCTATTAAAAGATGCCAAGGGTAGTGGTCAGAACGATTTTAAGATACCGCTGACGAGTCGCTTGTTAAAGCAAGTT
ATTGAGCGCGCACTAACGGGTAAGGGAGCATAA

Upstream 100 bases:

>100_bases
TTTGGTCGCCGCCGCCTAGCGAGGCACAAATTGGCGGTCATTCAATGGTAAAGCAAACTGCTAATGTTCCCAATGCTGCC
AGTGCTAAGGGAGAACGTTT

Downstream 100 bases:

>100_bases
TCATGTCACTATTGGACGCAGTACTGCCATCAGAACCCACAAAAAAACTGACCATGGATAACCCAGTTGATACTCTTTTT
GATAAAACTGCCAGTCAATT

Product: molybdopterin dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKRFEYIRVLEPQQAVMFATPEDASFIAGGTNLLDLMKIEIETPQKLVDITRLELQQIEATADGGLRIGTLVTNSDLAAH
PAVTAGYPVLARAMLAGASGQLRNKATTGGNLLQRTRCYYFYQPDSPCNKRNPGSGCPAIKGENRPLAVLGTSDDCIAQH
PSDMAVAMRLLDATIETLKADGTSRQIPIKDFYCLPKDTPNIETVLETGELITHIVLPAPVKGMHTYDKVRDRASYAFAL
VSCAAVINVNNQGKLETVRLAFGGIGTKPWRNEAVEALLIGTDGNVNIISQAADLLLKDAKGSGQNDFKIPLTSRLLKQV
IERALTGKGA

Sequences:

>Translated_330_residues
MKRFEYIRVLEPQQAVMFATPEDASFIAGGTNLLDLMKIEIETPQKLVDITRLELQQIEATADGGLRIGTLVTNSDLAAH
PAVTAGYPVLARAMLAGASGQLRNKATTGGNLLQRTRCYYFYQPDSPCNKRNPGSGCPAIKGENRPLAVLGTSDDCIAQH
PSDMAVAMRLLDATIETLKADGTSRQIPIKDFYCLPKDTPNIETVLETGELITHIVLPAPVKGMHTYDKVRDRASYAFAL
VSCAAVINVNNQGKLETVRLAFGGIGTKPWRNEAVEALLIGTDGNVNIISQAADLLLKDAKGSGQNDFKIPLTSRLLKQV
IERALTGKGA
>Mature_330_residues
MKRFEYIRVLEPQQAVMFATPEDASFIAGGTNLLDLMKIEIETPQKLVDITRLELQQIEATADGGLRIGTLVTNSDLAAH
PAVTAGYPVLARAMLAGASGQLRNKATTGGNLLQRTRCYYFYQPDSPCNKRNPGSGCPAIKGENRPLAVLGTSDDCIAQH
PSDMAVAMRLLDATIETLKADGTSRQIPIKDFYCLPKDTPNIETVLETGELITHIVLPAPVKGMHTYDKVRDRASYAFAL
VSCAAVINVNNQGKLETVRLAFGGIGTKPWRNEAVEALLIGTDGNVNIISQAADLLLKDAKGSGQNDFKIPLTSRLLKQV
IERALTGKGA

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=329, Percent_Identity=55.6231003039514, Blast_Score=337, Evalue=4e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 35603; Mature: 35603

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFEYIRVLEPQQAVMFATPEDASFIAGGTNLLDLMKIEIETPQKLVDITRLELQQIEA
CCCCCEEEEECCCCEEEEECCCCCCEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
TADGGLRIGTLVTNSDLAAHPAVTAGYPVLARAMLAGASGQLRNKATTGGNLLQRTRCYY
CCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCEEEE
FYQPDSPCNKRNPGSGCPAIKGENRPLAVLGTSDDCIAQHPSDMAVAMRLLDATIETLKA
EECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHC
DGTSRQIPIKDFYCLPKDTPNIETVLETGELITHIVLPAPVKGMHTYDKVRDRASYAFAL
CCCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHH
VSCAAVINVNNQGKLETVRLAFGGIGTKPWRNEAVEALLIGTDGNVNIISQAADLLLKDA
HHHHHEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHCC
KGSGQNDFKIPLTSRLLKQVIERALTGKGA
CCCCCCCEECCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRFEYIRVLEPQQAVMFATPEDASFIAGGTNLLDLMKIEIETPQKLVDITRLELQQIEA
CCCCCEEEEECCCCEEEEECCCCCCEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
TADGGLRIGTLVTNSDLAAHPAVTAGYPVLARAMLAGASGQLRNKATTGGNLLQRTRCYY
CCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCEEEE
FYQPDSPCNKRNPGSGCPAIKGENRPLAVLGTSDDCIAQHPSDMAVAMRLLDATIETLKA
EECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHC
DGTSRQIPIKDFYCLPKDTPNIETVLETGELITHIVLPAPVKGMHTYDKVRDRASYAFAL
CCCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHH
VSCAAVINVNNQGKLETVRLAFGGIGTKPWRNEAVEALLIGTDGNVNIISQAADLLLKDA
HHHHHEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHCC
KGSGQNDFKIPLTSRLLKQVIERALTGKGA
CCCCCCCEECCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]