Click here to switch to the map view.

The map label for this gene is uvrA [C]

Identifier: 93006634

GI number: 93006634

Start: 2234527

End: 2234685

Strand: Reverse

Name: uvrA [C]

Synonym: Pcryo_1810

Alternate gene names: 93006634

Gene position: 2234685-2234527 (Counterclockwise)

Preceding gene: 93006635

Following gene: 93006633

Centisome position: 73.03

GC content: 45.28

Gene sequence:

>159_bases
ATGGTTGAGCACGATATGCAGGTTGTCATAAGTAGCGATTGGATTATTGATATCGGTCTAGGCGCTGGTGATGAAGGTGG
AAAAATTGTAGCGCAAGGATCATCTGAACAAGTAGCGCAGTCGGAAATTAATCGAACTGCGCGCTTTATGGGTTCGTAG

Upstream 100 bases:

>100_bases
AATCTTCTTTAGAGATACGACGTTCTTGTATTTTGACTGGTACTGATAGAGCTAACCAAGTGATTGTAAGGTTCTTGTTG
ACACTGGCAATACGGTTATT

Downstream 100 bases:

>100_bases
TTCAAATCACCAAAATCTCATGGTTCCGAAAAATACAACAGCATTAACAGTTAACATTTAATCTATAGACTAGTTACAAG
ACCTAATCTAATATTTTATT

Product: putative excinuclease ABC subunit A

Products: NA

Alternate protein names: Excinuclease ABC A Subunit; Excinuclease Abc A Subunit

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MVEHDMQVVISSDWIIDIGLGAGDEGGKIVAQGSSEQVAQSEINRTARFMGS

Sequences:

>Translated_52_residues
MVEHDMQVVISSDWIIDIGLGAGDEGGKIVAQGSSEQVAQSEINRTARFMGS
>Mature_52_residues
MVEHDMQVVISSDWIIDIGLGAGDEGGKIVAQGSSEQVAQSEINRTARFMGS

Specific function: The Uvrabc Repair System Catalyzes The Recognition And Processing Of DNA Lesions. Uvra Is An Atpase And A DNA-Binding Protein. A Damage Recognition Complex Composed Of 2 Uvra And 2 Uvrb Subunits Scans DNA For Abnormalities. When The Presence Of A Lesion H

COG id: COG0178

COG function: function code L; Excinuclease ATPase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5521; Mature: 5521

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEHDMQVVISSDWIIDIGLGAGDEGGKIVAQGSSEQVAQSEINRTARFMGS
CCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEHDMQVVISSDWIIDIGLGAGDEGGKIVAQGSSEQVAQSEINRTARFMGS
CCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA