| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93006330
Identifier: 93006330
GI number: 93006330
Start: 1847959
End: 1849149
Strand: Reverse
Name: 93006330
Synonym: Pcryo_1504
Alternate gene names: NA
Gene position: 1849149-1847959 (Counterclockwise)
Preceding gene: 93006331
Following gene: 93006328
Centisome position: 60.43
GC content: 44.0
Gene sequence:
>1191_bases ATGACCCTCAAATTGCCAGAAAAAAACCTCGCTGCAATCATATTATTAACGGCTTTTTTGACGGCCTGTGGCGGTGGCGA AGACTCAGACAATAGCGCTAACGACGTTACGCCAAAGCCAACAGCACTTGCTGCTAGCTCTGATGATACCTCGACTGATA AGCCCGATGACCAAACTGATAATGTAGCAAGCGACAATGAGGCACAAGCAGCATTAATCGCAAGTAATACCTTTAGTCTA GCGCGTACCAGCTGTGGTCTTGGAGGTTTGTCCGCTGACACCGCACTGGATAATATTGCGATTCAACATGCCAAATATAT CAAGCACGTATTTGCTAACAGTACACCGACTACTTTTAGTCCACATTATGAAAATAAGATTGCGGATATCGCAAACGTCA CAGGTGATAATAACCCGTTCTTTAGGGGCGTTAGCTTCACAGACCGGTTATTAAAGGCAAAATATGGCAACGCCCGATAT GGGGTGACTGAGAATATTGCCCAATCGGTTTACTATAGCTCGGTAGGCAATATTATAGGCTCTGATATAGTGGCAGGCTC AATGGCTAAGTCGTTATTGGCAGCGCCTTATCATCTGCGTTCTTTGATGCTACCAGGTTCAAGTTTGACAGGGACGGGCA TGGTCACCTATAAGACTTTTGGTAAGGATACGGCTAATAATCAAGGTTATGTATTAGTCAACCATGCCTCAGCCACGCAG GCGACCGAAGATAATACGGTAGCAGGAATATTCACTTATCCATGCCAAGGGGTCAGCGGTACCGTCACTGCGTTGTATAA CGAAACGCCAAGTCCGGTCAAAGGAACAGGTCGTGACTTACAAACTGATCCTATCGGACAGCCTATTTATGTCAGTATGC CGTCTGCTCAAACGATTGATATCAGCAATGTTAAATTCCATGATATACAGCGTAATATGGATGTGCCCATTGAGCTATTA GATTATCGCCAAGATCCCCATAAAAATACCATATATGAGCTACCAGCGAACGAAGCGTTCATCTTGCCCATTACGGACAA TTTGAAAAGCTGTACAAGCACCAGTAAAAAAGACGAAAATTGTGGTTTACATGGCAATAGTGATTACCGTGTCAGCTTTG ATATCTTAGTTGATAGCAAAGCCATAGAGCGTGAGAGCTTTACCTTTAAAACTGGTGCTGTGAACAATTAA
Upstream 100 bases:
>100_bases ATACTTTTTATTAAATGACATCCGAATAAGTATTCGATAATATCCGTTATACCCAAAGTATTGTTCATAATAACTACGCC ACTATCTTATAGGATAAGAG
Downstream 100 bases:
>100_bases TTGCGTGATCTAGAAGACCTATTATAGAACAAGTTATAAAACAAGGGCTGAATCAGTTATCTGATTCAGCCCTTGTTTTA TATAATGGTCAATCCACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTLKLPEKNLAAIILLTAFLTACGGGEDSDNSANDVTPKPTALAASSDDTSTDKPDDQTDNVASDNEAQAALIASNTFSL ARTSCGLGGLSADTALDNIAIQHAKYIKHVFANSTPTTFSPHYENKIADIANVTGDNNPFFRGVSFTDRLLKAKYGNARY GVTENIAQSVYYSSVGNIIGSDIVAGSMAKSLLAAPYHLRSLMLPGSSLTGTGMVTYKTFGKDTANNQGYVLVNHASATQ ATEDNTVAGIFTYPCQGVSGTVTALYNETPSPVKGTGRDLQTDPIGQPIYVSMPSAQTIDISNVKFHDIQRNMDVPIELL DYRQDPHKNTIYELPANEAFILPITDNLKSCTSTSKKDENCGLHGNSDYRVSFDILVDSKAIERESFTFKTGAVNN
Sequences:
>Translated_396_residues MTLKLPEKNLAAIILLTAFLTACGGGEDSDNSANDVTPKPTALAASSDDTSTDKPDDQTDNVASDNEAQAALIASNTFSL ARTSCGLGGLSADTALDNIAIQHAKYIKHVFANSTPTTFSPHYENKIADIANVTGDNNPFFRGVSFTDRLLKAKYGNARY GVTENIAQSVYYSSVGNIIGSDIVAGSMAKSLLAAPYHLRSLMLPGSSLTGTGMVTYKTFGKDTANNQGYVLVNHASATQ ATEDNTVAGIFTYPCQGVSGTVTALYNETPSPVKGTGRDLQTDPIGQPIYVSMPSAQTIDISNVKFHDIQRNMDVPIELL DYRQDPHKNTIYELPANEAFILPITDNLKSCTSTSKKDENCGLHGNSDYRVSFDILVDSKAIERESFTFKTGAVNN >Mature_395_residues TLKLPEKNLAAIILLTAFLTACGGGEDSDNSANDVTPKPTALAASSDDTSTDKPDDQTDNVASDNEAQAALIASNTFSLA RTSCGLGGLSADTALDNIAIQHAKYIKHVFANSTPTTFSPHYENKIADIANVTGDNNPFFRGVSFTDRLLKAKYGNARYG VTENIAQSVYYSSVGNIIGSDIVAGSMAKSLLAAPYHLRSLMLPGSSLTGTGMVTYKTFGKDTANNQGYVLVNHASATQA TEDNTVAGIFTYPCQGVSGTVTALYNETPSPVKGTGRDLQTDPIGQPIYVSMPSAQTIDISNVKFHDIQRNMDVPIELLD YRQDPHKNTIYELPANEAFILPITDNLKSCTSTSKKDENCGLHGNSDYRVSFDILVDSKAIERESFTFKTGAVNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42368; Mature: 42237
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKLPEKNLAAIILLTAFLTACGGGEDSDNSANDVTPKPTALAASSDDTSTDKPDDQTD CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC NVASDNEAQAALIASNTFSLARTSCGLGGLSADTALDNIAIQHAKYIKHVFANSTPTTFS CCCCCCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PHYENKIADIANVTGDNNPFFRGVSFTDRLLKAKYGNARYGVTENIAQSVYYSSVGNIIG CCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH SDIVAGSMAKSLLAAPYHLRSLMLPGSSLTGTGMVTYKTFGKDTANNQGYVLVNHASATQ HHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCC ATEDNTVAGIFTYPCQGVSGTVTALYNETPSPVKGTGRDLQTDPIGQPIYVSMPSAQTID CCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE ISNVKFHDIQRNMDVPIELLDYRQDPHKNTIYELPANEAFILPITDNLKSCTSTSKKDEN ECCCEEEEHHCCCCCCCCEECCCCCCCCCCEEECCCCCEEEEEECCCHHHHHCCCCCCCC CGLHGNSDYRVSFDILVDSKAIERESFTFKTGAVNN CCCCCCCCEEEEEEEEECCCHHCCCCEEEECCCCCC >Mature Secondary Structure TLKLPEKNLAAIILLTAFLTACGGGEDSDNSANDVTPKPTALAASSDDTSTDKPDDQTD CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC NVASDNEAQAALIASNTFSLARTSCGLGGLSADTALDNIAIQHAKYIKHVFANSTPTTFS CCCCCCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PHYENKIADIANVTGDNNPFFRGVSFTDRLLKAKYGNARYGVTENIAQSVYYSSVGNIIG CCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH SDIVAGSMAKSLLAAPYHLRSLMLPGSSLTGTGMVTYKTFGKDTANNQGYVLVNHASATQ HHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCC ATEDNTVAGIFTYPCQGVSGTVTALYNETPSPVKGTGRDLQTDPIGQPIYVSMPSAQTID CCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE ISNVKFHDIQRNMDVPIELLDYRQDPHKNTIYELPANEAFILPITDNLKSCTSTSKKDEN ECCCEEEEHHCCCCCCCCEECCCCCCCCCCEEECCCCCEEEEEECCCHHHHHCCCCCCCC CGLHGNSDYRVSFDILVDSKAIERESFTFKTGAVNN CCCCCCCCEEEEEEEEECCCHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA