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The map label for this gene is 93006328

Identifier: 93006328

GI number: 93006328

Start: 1845844

End: 1847088

Strand: Reverse

Name: 93006328

Synonym: Pcryo_1502

Alternate gene names: NA

Gene position: 1847088-1845844 (Counterclockwise)

Preceding gene: 93006330

Following gene: 93006327

Centisome position: 60.36

GC content: 42.57

Gene sequence:

>1245_bases
ATGAATACAAAAAATTCGCTACAAAACACTCAGTCATCATTACCACCAACGCCATATTACTTGCTTGATGAAGCCGCAAT
CGTCGCCAATATGCAGATTATCGCGCGCCTGTGCGAGTTGTCGGGAGCAAAAGCACTGCTTGCGCTCAAATGTTTTGCGA
CTTGGGGCGTTTTTGATATCATGCAGCCCTATCTGCATGGTACGACGTCATCTTCGCTCAATGAAGTCAGATTGGGTTAT
GAGACTTTTGGTAAAAATAGCAATGCTAGTAGCAAAGATAAAAAAGAAACTCACGCCTATAGCGTGGCTTACAGCGCGGA
TGAGATGCCTGAAGTGCTCAGCTACGCCGATAAGATTATCTTCAACTCAATCTCCCAGTTAAATGTGTTTAAAGATCAAG
CAGCAGCGCAAAACATACCGGTTGGGCTGCGCTTAAATCCAAAGACCAGCAACTCGTCATTCATTATTGCCGATCCTGCG
CGTCCGTTTAGTCGTCTTGGCGAGCATGATAAAGATAAAATTGCAGCCGTGTTGAGTGATATTAGCGGTGTTATGATTCA
TAACAACTGTGAAAATGACAGTTTTGAGGCATTTAGTGAAAGCTTAGCTGATATTGAAACCAGATTTGGTGATGTTTTGC
AGCAGCTTGAATGGGTCAGTTTGGGCGGTGGCATTCATTTTATTGCTCCTAATTATCCACTAGAAAAACTGGCTGACAGG
TTAAAAGGCTTTAGTGAAAAATATGGCGTACAAGTCTACCTTGAGCCGGGTGAGGCAAGTATTCATGGTGCTGGCACGCT
AGTCACAAGCGTTTTAGATACAATGCACAATGAAAAAAATCTAGCAGTAGTAGATTCATCCATTGAAGCACATATGCTTG
ATTTGCTGATTTATCGTGAGTCAGCGCCGATAACGGCTGTTAATAGTGATTTAATTAATATCGCCTCTCTTGATATCGAT
CCTACCAACATTGCACCCATAAGCGAGAACGCTAAATCAGCTGATAATACGATTATCTATGGTCGTTCTTGTTTGGCAGG
CGATATCTTTGGTGAATATGCCTTGCCAAATAAGCTAAAAGTAGGTGACACCGTTACTTTTGGCAACGCAGCAGGCTATA
CCATGGTGAAGAAAAACTGGTTTAATGGCGTGAATATGCCAGCGATTGTCATTCGCCGCTTAGATGGCAGTATCGATATC
CAACGCGAGTTTGATTATCAAGATTATAAGGCAAGCTTGTCATAA

Upstream 100 bases:

>100_bases
GAGAGAGACATAAGCTATTCTAATTATGATAGATTTAGTCTACTATAGCGCAAATATTTATGTCTGTCATGATACGAGCA
GCAGCTATTAGGTAAACCTT

Downstream 100 bases:

>100_bases
CGCTATTAGACGCATATTCGGCATGACCAAATGGTAATGCCAAACAACTATCTATAAATTTTTATTCGCTTTGACGTTTT
TAAGTTATGTTGTAATTTTT

Product: Orn/DAP/Arg decarboxylase 2

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNTKNSLQNTQSSLPPTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDIMQPYLHGTTSSSLNEVRLGY
ETFGKNSNASSKDKKETHAYSVAYSADEMPEVLSYADKIIFNSISQLNVFKDQAAAQNIPVGLRLNPKTSNSSFIIADPA
RPFSRLGEHDKDKIAAVLSDISGVMIHNNCENDSFEAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPNYPLEKLADR
LKGFSEKYGVQVYLEPGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPITAVNSDLINIASLDID
PTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNKLKVGDTVTFGNAAGYTMVKKNWFNGVNMPAIVIRRLDGSIDI
QREFDYQDYKASLS

Sequences:

>Translated_414_residues
MNTKNSLQNTQSSLPPTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDIMQPYLHGTTSSSLNEVRLGY
ETFGKNSNASSKDKKETHAYSVAYSADEMPEVLSYADKIIFNSISQLNVFKDQAAAQNIPVGLRLNPKTSNSSFIIADPA
RPFSRLGEHDKDKIAAVLSDISGVMIHNNCENDSFEAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPNYPLEKLADR
LKGFSEKYGVQVYLEPGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPITAVNSDLINIASLDID
PTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNKLKVGDTVTFGNAAGYTMVKKNWFNGVNMPAIVIRRLDGSIDI
QREFDYQDYKASLS
>Mature_414_residues
MNTKNSLQNTQSSLPPTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDIMQPYLHGTTSSSLNEVRLGY
ETFGKNSNASSKDKKETHAYSVAYSADEMPEVLSYADKIIFNSISQLNVFKDQAAAQNIPVGLRLNPKTSNSSFIIADPA
RPFSRLGEHDKDKIAAVLSDISGVMIHNNCENDSFEAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPNYPLEKLADR
LKGFSEKYGVQVYLEPGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPITAVNSDLINIASLDID
PTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNKLKVGDTVTFGNAAGYTMVKKNWFNGVNMPAIVIRRLDGSIDI
QREFDYQDYKASLS

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45289; Mature: 45289

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKNSLQNTQSSLPPTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDI
CCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MQPYLHGTTSSSLNEVRLGYETFGKNSNASSKDKKETHAYSVAYSADEMPEVLSYADKII
HHHHHCCCCCCCHHHHEECHHHHCCCCCCCCCCHHHHHHEEEEECCHHHHHHHHHHHHHH
FNSISQLNVFKDQAAAQNIPVGLRLNPKTSNSSFIIADPARPFSRLGEHDKDKIAAVLSD
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHH
ISGVMIHNNCENDSFEAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPNYPLEKLADR
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCHHHHHHH
LKGFSEKYGVQVYLEPGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRE
HCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHEEEC
SAPITAVNSDLINIASLDIDPTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNKLK
CCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCEE
VGDTVTFGNAAGYTMVKKNWFNGVNMPAIVIRRLDGSIDIQREFDYQDYKASLS
CCCEEEECCCCCCCEEHHCCCCCCCCHHHHEECCCCCEEEEECCCCCCHHCCCC
>Mature Secondary Structure
MNTKNSLQNTQSSLPPTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDI
CCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MQPYLHGTTSSSLNEVRLGYETFGKNSNASSKDKKETHAYSVAYSADEMPEVLSYADKII
HHHHHCCCCCCCHHHHEECHHHHCCCCCCCCCCHHHHHHEEEEECCHHHHHHHHHHHHHH
FNSISQLNVFKDQAAAQNIPVGLRLNPKTSNSSFIIADPARPFSRLGEHDKDKIAAVLSD
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHH
ISGVMIHNNCENDSFEAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPNYPLEKLADR
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCHHHHHHH
LKGFSEKYGVQVYLEPGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRE
HCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHEEEC
SAPITAVNSDLINIASLDIDPTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNKLK
CCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCEE
VGDTVTFGNAAGYTMVKKNWFNGVNMPAIVIRRLDGSIDIQREFDYQDYKASLS
CCCEEEECCCCCCCEEHHCCCCCCCCHHHHEECCCCCEEEEECCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA