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The map label for this gene is benC [H]

Identifier: 93006093

GI number: 93006093

Start: 1536088

End: 1537104

Strand: Reverse

Name: benC [H]

Synonym: Pcryo_1265

Alternate gene names: 93006093

Gene position: 1537104-1536088 (Counterclockwise)

Preceding gene: 93006094

Following gene: 93006092

Centisome position: 50.23

GC content: 45.82

Gene sequence:

>1017_bases
ATGGAATATAATATTGCTCTACAGTTCGAAGACGGCGTCACAGGCTTCATCAAATGTGAAGCCGACGAAACCGTCGCCGA
AGCCGCTTATCGTCAAAAATTTAATATCCCTGTGGATTGCCTTGATGGTGCTTGCGGTACTTGCCGTTGCCATTGTGAAT
CTGGCAGCTACGACATGCACCCTGATATGTATATCGAAGATGCACTGACAGAAGCTGAAGCTGCTGAAGGGTATGTACTC
ACCTGTCAGATGATTCCAGAAAGCGACTGCGTGATCAAAGTACCAACCTCCTCTGAAGCCTGCAAAGTCGGCAAGTCTGT
ATTCAAAGGCAAACTACAGCAGCTGAATGTGCTGTCAGAATCTACCATTCACTTTGGCGTCGAAGTCGACAATCCAGATG
CACTAGTATTTTTGCCAGGCCAGTATGTCAATGTCAGTATTCCTGATTCTAACGAGACACGCTCCTATTCATTTAGCTCT
ATACCTAGTGCCAATCAGGCTGAATTTGTCGTCCGCAATATTCCTAATGGCAAGATGAGCACCTTCTTATCTGATACTGC
GACTATAGGTCAAGAGATTAATTTTGAGGGTCCATTTGGTAGCTTTTACCTGCGCCCTCTAATCCGCCCGACCCTATTTC
TAGCAGGTGGTACTGGTATCGCGCCTTTTTTATCGATGCTAAAAAGTTTAGAGGTGTCTGGTGCTCATCATCCTGTCAGG
ATGGTCTACGGCGTCACCAACGACTTTGATCTTATAGAAGTTGAGAAACTAGAAGAAGTCAAACAAAACCACCCTTGGTT
TGACTACCGCACCTGTGTCGCCACTGAAGACAGCCAGCATGAGCGTAAAGGCTATGTCACCGGTCATGTTGATAATGAGT
GGCTGAACGATGGTGACGTCGATGTCTACTTGTGTGGTCCGTTAGGGATGGTGGATGCGGTGAGTAACTGGTTAGACAGC
AGCAATCTAAAACCGAGTAATTTTTACTATGAAAAATTCACGCCCAGTGAACAATAA

Upstream 100 bases:

>100_bases
ATGTGCATCAAATCATGGACGTCTATCACGTCTAATCATTATTCACTCATTATTTAGCCACTAGCTTTTAATTAATACGT
GTTGAAAAGGGATATTTCTC

Downstream 100 bases:

>100_bases
CGTAGCCTAGCCGTATTACTCTACTAGCAAAGCATGAGCAAGATTTTTAGGAGACTGTCATGAGTAAAAGATTTGATAAT
AAAGTATGTATCGTTACTGG

Product: oxidoreductase FAD/NAD(P)-binding

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MEYNIALQFEDGVTGFIKCEADETVAEAAYRQKFNIPVDCLDGACGTCRCHCESGSYDMHPDMYIEDALTEAEAAEGYVL
TCQMIPESDCVIKVPTSSEACKVGKSVFKGKLQQLNVLSESTIHFGVEVDNPDALVFLPGQYVNVSIPDSNETRSYSFSS
IPSANQAEFVVRNIPNGKMSTFLSDTATIGQEINFEGPFGSFYLRPLIRPTLFLAGGTGIAPFLSMLKSLEVSGAHHPVR
MVYGVTNDFDLIEVEKLEEVKQNHPWFDYRTCVATEDSQHERKGYVTGHVDNEWLNDGDVDVYLCGPLGMVDAVSNWLDS
SNLKPSNFYYEKFTPSEQ

Sequences:

>Translated_338_residues
MEYNIALQFEDGVTGFIKCEADETVAEAAYRQKFNIPVDCLDGACGTCRCHCESGSYDMHPDMYIEDALTEAEAAEGYVL
TCQMIPESDCVIKVPTSSEACKVGKSVFKGKLQQLNVLSESTIHFGVEVDNPDALVFLPGQYVNVSIPDSNETRSYSFSS
IPSANQAEFVVRNIPNGKMSTFLSDTATIGQEINFEGPFGSFYLRPLIRPTLFLAGGTGIAPFLSMLKSLEVSGAHHPVR
MVYGVTNDFDLIEVEKLEEVKQNHPWFDYRTCVATEDSQHERKGYVTGHVDNEWLNDGDVDVYLCGPLGMVDAVSNWLDS
SNLKPSNFYYEKFTPSEQ
>Mature_338_residues
MEYNIALQFEDGVTGFIKCEADETVAEAAYRQKFNIPVDCLDGACGTCRCHCESGSYDMHPDMYIEDALTEAEAAEGYVL
TCQMIPESDCVIKVPTSSEACKVGKSVFKGKLQQLNVLSESTIHFGVEVDNPDALVFLPGQYVNVSIPDSNETRSYSFSS
IPSANQAEFVVRNIPNGKMSTFLSDTATIGQEINFEGPFGSFYLRPLIRPTLFLAGGTGIAPFLSMLKSLEVSGAHHPVR
MVYGVTNDFDLIEVEKLEEVKQNHPWFDYRTCVATEDSQHERKGYVTGHVDNEWLNDGDVDVYLCGPLGMVDAVSNWLDS
SNLKPSNFYYEKFTPSEQ

Specific function: Electron transfer component of benzoate 1,2-dioxygenase system [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788903, Length=224, Percent_Identity=25.8928571428571, Blast_Score=73, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321673, Length=237, Percent_Identity=27.4261603375527, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6322146, Length=218, Percent_Identity=26.605504587156, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 37486; Mature: 37486

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNIALQFEDGVTGFIKCEADETVAEAAYRQKFNIPVDCLDGACGTCRCHCESGSYDMH
CCEEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCCCCC
PDMYIEDALTEAEAAEGYVLTCQMIPESDCVIKVPTSSEACKVGKSVFKGKLQQLNVLSE
CCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
STIHFGVEVDNPDALVFLPGQYVNVSIPDSNETRSYSFSSIPSANQAEFVVRNIPNGKMS
CEEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCEECCCCCCCCCCEEEEEECCCCHHH
TFLSDTATIGQEINFEGPFGSFYLRPLIRPTLFLAGGTGIAPFLSMLKSLEVSGAHHPVR
HHHHHHHHHCCEECCCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEE
MVYGVTNDFDLIEVEKLEEVKQNHPWFDYRTCVATEDSQHERKGYVTGHVDNEWLNDGDV
EEEECCCCCCEEEHHHHHHHHHCCCCEEEEEEEECCCCCHHCCCCEEECCCCCCCCCCCE
DVYLCGPLGMVDAVSNWLDSSNLKPSNFYYEKFTPSEQ
EEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MEYNIALQFEDGVTGFIKCEADETVAEAAYRQKFNIPVDCLDGACGTCRCHCESGSYDMH
CCEEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCCCCC
PDMYIEDALTEAEAAEGYVLTCQMIPESDCVIKVPTSSEACKVGKSVFKGKLQQLNVLSE
CCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
STIHFGVEVDNPDALVFLPGQYVNVSIPDSNETRSYSFSSIPSANQAEFVVRNIPNGKMS
CEEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCEECCCCCCCCCCEEEEEECCCCHHH
TFLSDTATIGQEINFEGPFGSFYLRPLIRPTLFLAGGTGIAPFLSMLKSLEVSGAHHPVR
HHHHHHHHHCCEECCCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEE
MVYGVTNDFDLIEVEKLEEVKQNHPWFDYRTCVATEDSQHERKGYVTGHVDNEWLNDGDV
EEEECCCCCCEEEHHHHHHHHHCCCCEEEEEEEECCCCCHHCCCCEEECCCCCCCCCCCE
DVYLCGPLGMVDAVSNWLDSSNLKPSNFYYEKFTPSEQ
EEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1885518 [H]