| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005734
Identifier: 93005734
GI number: 93005734
Start: 1072699
End: 1073598
Strand: Reverse
Name: 93005734
Synonym: Pcryo_0906
Alternate gene names: NA
Gene position: 1073598-1072699 (Counterclockwise)
Preceding gene: 93005735
Following gene: 93005733
Centisome position: 35.09
GC content: 44.56
Gene sequence:
>900_bases ATGTCAAAATATGAGTTAGACGTGGTAGTTGATGGATTCCATTACCTAGAAGGACCGCGTTGGTACAAAAACGCTTTATG GTTTGTCGATTTTTATACCAAAGGCGTTTATCGTGTTAATGATGAAGGCGTTGCAGAAAAAATTGTGCATGTAGAACAGC AGCCATCTGGCCTAGGCTGGCTTCCTGACGGCCGTATGCTCGTTGTCTCTATGAAAGATCGTAAAGTGTTATGTTTAGAG GACAATGGCGAATTAGTTGTTCACGCTGATATTTGGAAGCATTGTGAGGGGCATGCTAACGATATGGTCGTTGCGCCTAA TGGCAACGCTTATGTTGGAAACTTCGGTTTTGATCTGATGGGTGGTGCTGATCATAAACACACTGGTCTTGTATTGGTGA GACCTGATGGTACCTCTCAGGTTGTGGCAGAAGGTTTGGCCTTTCCAAATGGCATGGTCATTTCTGCGGATGAAAAGACA TTAATCGTTAATGAGCTATTTGGTAATAAAGTATCACAGTTCGATATTAATAAAGACGGCACTTTAGGAGAAAAACGTGA TTTTGCTAACTTTGGAGAGTTAGGAGACGAGCCAAATTTAGGGGCACGTATAGAGAACGCCAGCATCTTACCTGATGGTC TTGCCTTAGATAGCGAGGGCGCTGTTTGGATTGCAGATACCTTGAACCAACGTGCTGTTCGTATTAAAGAAGGGGGAGAA ATCTTAGAAACCGTTGATACGGCACCTGACGGCATTTTTGCGGTCGCTCTTGGCGGACAAGATGGCAAAACATTGTTTAT GTGTGCAGCACCTGACTGGAATGAAGCGTCACGCACCGCTGAAACTAAAGGGCGTATGCTATCTACACCAGTTAAAGTGG GTCATGCTGGTACGCCTTAG
Upstream 100 bases:
>100_bases GGATATGTCTTTAGAGGAAGTAAAAATGATCTACCAAGAAATACTCTAATAAGCAGCAAATTTCTTAAATAATTTTGTCT ATAAATCAAGGAAGATAGTT
Downstream 100 bases:
>100_bases TTTAAGAATACGCCACTAAAAATATTGAGTCAGTATCAAAAATATATCTATCTACTACCCATTTATAATAAGAAACTAGA ATCGATACCAATTTTATCGA
Product: gluconolactonase
Products: NA
Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; 5-Valerolactone Hydrolase; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein; Gluconolactonase Protein; SMP-30/Gluconolaconase/LRE-Like Region Family; Lactone Hydrolase; Lactonase; Senescence Marker Protein-
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSKYELDVVVDGFHYLEGPRWYKNALWFVDFYTKGVYRVNDEGVAEKIVHVEQQPSGLGWLPDGRMLVVSMKDRKVLCLE DNGELVVHADIWKHCEGHANDMVVAPNGNAYVGNFGFDLMGGADHKHTGLVLVRPDGTSQVVAEGLAFPNGMVISADEKT LIVNELFGNKVSQFDINKDGTLGEKRDFANFGELGDEPNLGARIENASILPDGLALDSEGAVWIADTLNQRAVRIKEGGE ILETVDTAPDGIFAVALGGQDGKTLFMCAAPDWNEASRTAETKGRMLSTPVKVGHAGTP
Sequences:
>Translated_299_residues MSKYELDVVVDGFHYLEGPRWYKNALWFVDFYTKGVYRVNDEGVAEKIVHVEQQPSGLGWLPDGRMLVVSMKDRKVLCLE DNGELVVHADIWKHCEGHANDMVVAPNGNAYVGNFGFDLMGGADHKHTGLVLVRPDGTSQVVAEGLAFPNGMVISADEKT LIVNELFGNKVSQFDINKDGTLGEKRDFANFGELGDEPNLGARIENASILPDGLALDSEGAVWIADTLNQRAVRIKEGGE ILETVDTAPDGIFAVALGGQDGKTLFMCAAPDWNEASRTAETKGRMLSTPVKVGHAGTP >Mature_298_residues SKYELDVVVDGFHYLEGPRWYKNALWFVDFYTKGVYRVNDEGVAEKIVHVEQQPSGLGWLPDGRMLVVSMKDRKVLCLED NGELVVHADIWKHCEGHANDMVVAPNGNAYVGNFGFDLMGGADHKHTGLVLVRPDGTSQVVAEGLAFPNGMVISADEKTL IVNELFGNKVSQFDINKDGTLGEKRDFANFGELGDEPNLGARIENASILPDGLALDSEGAVWIADTLNQRAVRIKEGGEI LETVDTAPDGIFAVALGGQDGKTLFMCAAPDWNEASRTAETKGRMLSTPVKVGHAGTP
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32459; Mature: 32328
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYELDVVVDGFHYLEGPRWYKNALWFVDFYTKGVYRVNDEGVAEKIVHVEQQPSGLGW CCCEEEEEEECCHHHCCCCCCHHCEEEEEEEEECCEEEECCCCHHHHHHHHCCCCCCCCC LPDGRMLVVSMKDRKVLCLEDNGELVVHADIWKHCEGHANDMVVAPNGNAYVGNFGFDLM CCCCCEEEEEECCCEEEEEECCCCEEEEEHHHHCCCCCCCCEEECCCCCEEEEECCEEEC GGADHKHTGLVLVRPDGTSQVVAEGLAFPNGMVISADEKTLIVNELFGNKVSQFDINKDG CCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEECCCCEEEEEHHHCCCEEEEECCCCC TLGEKRDFANFGELGDEPNLGARIENASILPDGLALDSEGAVWIADTLNQRAVRIKEGGE CCCCCCCCCCHHHCCCCCCCCEEECCCEECCCCEEECCCCCEEEEECCCCCEEEEECCCC ILETVDTAPDGIFAVALGGQDGKTLFMCAAPDWNEASRTAETKGRMLSTPVKVGHAGTP EEEHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCEEECCEECCCCCCC >Mature Secondary Structure SKYELDVVVDGFHYLEGPRWYKNALWFVDFYTKGVYRVNDEGVAEKIVHVEQQPSGLGW CCEEEEEEECCHHHCCCCCCHHCEEEEEEEEECCEEEECCCCHHHHHHHHCCCCCCCCC LPDGRMLVVSMKDRKVLCLEDNGELVVHADIWKHCEGHANDMVVAPNGNAYVGNFGFDLM CCCCCEEEEEECCCEEEEEECCCCEEEEEHHHHCCCCCCCCEEECCCCCEEEEECCEEEC GGADHKHTGLVLVRPDGTSQVVAEGLAFPNGMVISADEKTLIVNELFGNKVSQFDINKDG CCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEECCCCEEEEEHHHCCCEEEEECCCCC TLGEKRDFANFGELGDEPNLGARIENASILPDGLALDSEGAVWIADTLNQRAVRIKEGGE CCCCCCCCCCHHHCCCCCCCCEEECCCEECCCCEEECCCCCEEEEECCCCCEEEEECCCC ILETVDTAPDGIFAVALGGQDGKTLFMCAAPDWNEASRTAETKGRMLSTPVKVGHAGTP EEEHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCEEECCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA