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The map label for this gene is 93005733

Identifier: 93005733

GI number: 93005733

Start: 1072100

End: 1072513

Strand: Reverse

Name: 93005733

Synonym: Pcryo_0905

Alternate gene names: NA

Gene position: 1072513-1072100 (Counterclockwise)

Preceding gene: 93005734

Following gene: 93005705

Centisome position: 35.05

GC content: 47.34

Gene sequence:

>414_bases
ATGTCAGCGACCAAAGAAGAAATAACAGCCTTTATGGCATTAGAATTTCCCCAAACCAAGTGCAAAGTTGAAGCAGTAGG
CGATGATAGTTCGACCTTATCGCATGATATCGGTATAGATGAGCTACGTCCTGGTGGTACGGTCTCTGGCCCTGTATTGA
TGAGCATTGCTGATGTCGCACTCTATGTGGCGATACTTGGTAAGATTGGCATTGTAGCGTTGACAGTAACAACAACCCTT
ACCATCAATTTTCTGCGCAAACCATCAGCAGAAGCGCGTATCATTGCTGAGTGCACCTTGCTAAAGGTAGGGCGCACGCT
CATTGTAGGTGAGGTTTCCTTGTACTCAGAAGGCTCTAGCGACTTGGTCGCGCATGTTGTTGGCACATATTCTGTACCGC
CCAAGCACGACTAA

Upstream 100 bases:

>100_bases
TACCAATTTTATCGATTCTAGTTGTTTTAATCGAACCAATGAACTTGAGTGCGAAGAAAAGATAGTTAACAACAAGAATA
ATTAAACCACAGGAGTATGT

Downstream 100 bases:

>100_bases
GCTACTGTCTCAACATTGTTTTCTAGACTGTTTTCTAGATTGTCATGCTTTGGATTATTTAGATCATGATAATGCATTCC
ACTATGTGCTTTTTGGGTAG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Thioesterase Family Domain Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Superfamily; Thioesterase Protein; Thioesterase; Phenylacetic Acid Degradation-Like Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSATKEEITAFMALEFPQTKCKVEAVGDDSSTLSHDIGIDELRPGGTVSGPVLMSIADVALYVAILGKIGIVALTVTTTL
TINFLRKPSAEARIIAECTLLKVGRTLIVGEVSLYSEGSSDLVAHVVGTYSVPPKHD

Sequences:

>Translated_137_residues
MSATKEEITAFMALEFPQTKCKVEAVGDDSSTLSHDIGIDELRPGGTVSGPVLMSIADVALYVAILGKIGIVALTVTTTL
TINFLRKPSAEARIIAECTLLKVGRTLIVGEVSLYSEGSSDLVAHVVGTYSVPPKHD
>Mature_136_residues
SATKEEITAFMALEFPQTKCKVEAVGDDSSTLSHDIGIDELRPGGTVSGPVLMSIADVALYVAILGKIGIVALTVTTTLT
INFLRKPSAEARIIAECTLLKVGRTLIVGEVSLYSEGSSDLVAHVVGTYSVPPKHD

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14431; Mature: 14300

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATKEEITAFMALEFPQTKCKVEAVGDDSSTLSHDIGIDELRPGGTVSGPVLMSIADVA
CCCCHHHHEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LYVAILGKIGIVALTVTTTLTINFLRKPSAEARIIAECTLLKVGRTLIVGEVSLYSEGSS
HHHHHHHHHHEEEEEEEHEEEEEEECCCCCCCEEEHHHHHHHCCCEEEEEEEEEECCCCC
DLVAHVVGTYSVPPKHD
HHEEHEEECCCCCCCCC
>Mature Secondary Structure 
SATKEEITAFMALEFPQTKCKVEAVGDDSSTLSHDIGIDELRPGGTVSGPVLMSIADVA
CCCHHHHEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LYVAILGKIGIVALTVTTTLTINFLRKPSAEARIIAECTLLKVGRTLIVGEVSLYSEGSS
HHHHHHHHHHEEEEEEEHEEEEEEECCCCCCCEEEHHHHHHHCCCEEEEEEEEEECCCCC
DLVAHVVGTYSVPPKHD
HHEEHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA