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The map label for this gene is glcD [H]

Identifier: 93005726

GI number: 93005726

Start: 1064042

End: 1065499

Strand: Direct

Name: glcD [H]

Synonym: Pcryo_0898

Alternate gene names: 93005726

Gene position: 1064042-1065499 (Clockwise)

Preceding gene: 93005725

Following gene: 93005727

Centisome position: 34.77

GC content: 43.83

Gene sequence:

>1458_bases
GTGACTGATTTTTCAGCACTGCCTACTTTAGAAGCTGGGCATGCTTTAACCACGCTAGCATTGACTGAGCAAGTATTGTC
TATATTGCAAGAGCAGCATGGTTATGATGCATCACAGATTAAGACGGATACTGTGAGTCTAGAGCATTGGGGTAAAGACT
GGACCAAACATTTTGCGCCAGCACCCTCTGCTATCGTATTTCCGAAATCTACTAAGCAGGTCCAAGCCTTAGTAAAGCTG
GCAAATGAGTATAATATTGTTATCACACCGAGTGGTGGTCGTACTGGGCTATCGGCAGGTGCAGTCGCTAGCAATGGTGA
GATAGTCGTCAGCCTAGATAAGATGAATAAAATTGTTCAGTTTTATCCGGCTGATCGTTTGGTAGAGGTGGAGGCCGGTG
TGATTACTGCGCAGCTACAGCAATTTGCCGAAGCGCAGGATTTGTATTATCCGGTTGATTTTGCCTCAGCAGGTTCGAGT
CAGATCGGTGGTAATATTGGTACCAATGCTGGCGGGATTAAAGTGATTCGCTATGGCATGACACGTCAATGGGTAATGGG
TCTAACTGTCGTGACGGGCAAAGGTGATATCCTTAAGCTGAATCGAGGCATGATTAAAAACGCTACTGGCTATGATTTAC
GTCAATTATTTATTGGCGCTGAAGGCACATTAGGTATCGTCACCGAAGCACAAATGAAGCTCAACCGTCCACCCCAAGAT
TTGACCGTGATGGTGCTCGGCATGGATGAATTTGACCATGTGATGCAGGTGTTAGCGGCTTTTCAAGCACAAATTGATTT
GACTGCGTTTGAGTTCTTTGATGAGGTGGCGGTTGATAAATTAATGGCGACTGGGCATGTGCAAGAGCCGTTTGAAGCTC
GAACCAAATACTACGTTTTATTAGAATTCGAAGCGCCGTATGAGCCGATTATGGATAAGGCGATGGCTATCTTTGAAGAC
TGTATGGATAATGGTTGGATAGTTGATGGGGTAATGAGTCAGAGTATGGCTCAGGCGATGGACTTGTGGAAGCTGCGCGA
GTATATCTCTGAGACGATTTCAGTATTCACGCCGTATAAAAATGACATATCAGTACTCATCAGCCATGTGCCAAACTTTA
TCCATGATATAGAAACGATCGTAAACGCCAAATATCCAGATTTTGAGATTTGCTGGTTTGGACATATTGGTGATGGCAAC
TTGCATCTCAATATTTTAAAGCCCGAGAATTTATCGAAAGATGAATTCTTTGGGCAATGCCAGACGGTAAATAATTCTAT
CTTTGAGGTAGTACAGAAGTATGGTGGTTCGATCTCAGCAGAACATGGCGTGGGTATGACTAAAAAGCCTTATCTACACT
ATAGCCGTAGCGAAACCGAGATTGATTATCTGCGTGAGATTAAGAAAGTGCTCGATCCCAATGGTATTATGAATCGCGGC
AAGATTTTTGATCTTTAG

Upstream 100 bases:

>100_bases
TTTTTTGACGCAGGGCGTTGTGTTTATTTATTGCCGCCGCTGATCTGGCAGAGAGATTAAGTGAACGGCACACTGCTTTT
ATTTATTTGGAGTGTATATT

Downstream 100 bases:

>100_bases
TTGAATGGTATCGTAATCAACTAAGACTTATTTTTAATAAAAACTATAAGGAACTCTCATGCATATTTTAGACAGCAAAA
CGGTAAAGAGTCAATTGACA

Product: FAD linked oxidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MTDFSALPTLEAGHALTTLALTEQVLSILQEQHGYDASQIKTDTVSLEHWGKDWTKHFAPAPSAIVFPKSTKQVQALVKL
ANEYNIVITPSGGRTGLSAGAVASNGEIVVSLDKMNKIVQFYPADRLVEVEAGVITAQLQQFAEAQDLYYPVDFASAGSS
QIGGNIGTNAGGIKVIRYGMTRQWVMGLTVVTGKGDILKLNRGMIKNATGYDLRQLFIGAEGTLGIVTEAQMKLNRPPQD
LTVMVLGMDEFDHVMQVLAAFQAQIDLTAFEFFDEVAVDKLMATGHVQEPFEARTKYYVLLEFEAPYEPIMDKAMAIFED
CMDNGWIVDGVMSQSMAQAMDLWKLREYISETISVFTPYKNDISVLISHVPNFIHDIETIVNAKYPDFEICWFGHIGDGN
LHLNILKPENLSKDEFFGQCQTVNNSIFEVVQKYGGSISAEHGVGMTKKPYLHYSRSETEIDYLREIKKVLDPNGIMNRG
KIFDL

Sequences:

>Translated_485_residues
MTDFSALPTLEAGHALTTLALTEQVLSILQEQHGYDASQIKTDTVSLEHWGKDWTKHFAPAPSAIVFPKSTKQVQALVKL
ANEYNIVITPSGGRTGLSAGAVASNGEIVVSLDKMNKIVQFYPADRLVEVEAGVITAQLQQFAEAQDLYYPVDFASAGSS
QIGGNIGTNAGGIKVIRYGMTRQWVMGLTVVTGKGDILKLNRGMIKNATGYDLRQLFIGAEGTLGIVTEAQMKLNRPPQD
LTVMVLGMDEFDHVMQVLAAFQAQIDLTAFEFFDEVAVDKLMATGHVQEPFEARTKYYVLLEFEAPYEPIMDKAMAIFED
CMDNGWIVDGVMSQSMAQAMDLWKLREYISETISVFTPYKNDISVLISHVPNFIHDIETIVNAKYPDFEICWFGHIGDGN
LHLNILKPENLSKDEFFGQCQTVNNSIFEVVQKYGGSISAEHGVGMTKKPYLHYSRSETEIDYLREIKKVLDPNGIMNRG
KIFDL
>Mature_484_residues
TDFSALPTLEAGHALTTLALTEQVLSILQEQHGYDASQIKTDTVSLEHWGKDWTKHFAPAPSAIVFPKSTKQVQALVKLA
NEYNIVITPSGGRTGLSAGAVASNGEIVVSLDKMNKIVQFYPADRLVEVEAGVITAQLQQFAEAQDLYYPVDFASAGSSQ
IGGNIGTNAGGIKVIRYGMTRQWVMGLTVVTGKGDILKLNRGMIKNATGYDLRQLFIGAEGTLGIVTEAQMKLNRPPQDL
TVMVLGMDEFDHVMQVLAAFQAQIDLTAFEFFDEVAVDKLMATGHVQEPFEARTKYYVLLEFEAPYEPIMDKAMAIFEDC
MDNGWIVDGVMSQSMAQAMDLWKLREYISETISVFTPYKNDISVLISHVPNFIHDIETIVNAKYPDFEICWFGHIGDGNL
HLNILKPENLSKDEFFGQCQTVNNSIFEVVQKYGGSISAEHGVGMTKKPYLHYSRSETEIDYLREIKKVLDPNGIMNRGK
IFDL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=447, Percent_Identity=31.9910514541387, Blast_Score=254, Evalue=9e-68,
Organism=Homo sapiens, GI37595756, Length=457, Percent_Identity=28.6652078774617, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI37595754, Length=480, Percent_Identity=27.2916666666667, Blast_Score=176, Evalue=6e-44,
Organism=Homo sapiens, GI4501993, Length=461, Percent_Identity=24.295010845987, Blast_Score=99, Evalue=1e-20,
Organism=Escherichia coli, GI1789351, Length=432, Percent_Identity=26.1574074074074, Blast_Score=159, Evalue=5e-40,
Organism=Escherichia coli, GI1787977, Length=513, Percent_Identity=24.3664717348928, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI48994914, Length=160, Percent_Identity=26.875, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17534361, Length=455, Percent_Identity=31.4285714285714, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI71992373, Length=471, Percent_Identity=26.963906581741, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI71992381, Length=471, Percent_Identity=26.1146496815287, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI71992392, Length=369, Percent_Identity=27.10027100271, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17556096, Length=224, Percent_Identity=26.7857142857143, Blast_Score=73, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320023, Length=466, Percent_Identity=33.2618025751073, Blast_Score=263, Evalue=6e-71,
Organism=Saccharomyces cerevisiae, GI6320764, Length=445, Percent_Identity=33.7078651685393, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6320027, Length=443, Percent_Identity=28.2167042889391, Blast_Score=160, Evalue=5e-40,
Organism=Drosophila melanogaster, GI18921117, Length=447, Percent_Identity=33.5570469798658, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI24639277, Length=447, Percent_Identity=33.5570469798658, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI24639275, Length=447, Percent_Identity=33.5570469798658, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI24653753, Length=204, Percent_Identity=27.4509803921569, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 53865; Mature: 53734

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFSALPTLEAGHALTTLALTEQVLSILQEQHGYDASQIKTDTVSLEHWGKDWTKHFAP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEHHHHCCHHHHHCCC
APSAIVFPKSTKQVQALVKLANEYNIVITPSGGRTGLSAGAVASNGEIVVSLDKMNKIVQ
CCCEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEECCCCEEEEHHHHHHHHE
FYPADRLVEVEAGVITAQLQQFAEAQDLYYPVDFASAGSSQIGGNIGTNAGGIKVIRYGM
ECCCCCEEEECCCHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECC
TRQWVMGLTVVTGKGDILKLNRGMIKNATGYDLRQLFIGAEGTLGIVTEAQMKLNRPPQD
CHHEEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHEECCCCCEEEEEEHHHHCCCCCCC
LTVMVLGMDEFDHVMQVLAAFQAQIDLTAFEFFDEVAVDKLMATGHVQEPFEARTKYYVL
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEE
LEFEAPYEPIMDKAMAIFEDCMDNGWIVDGVMSQSMAQAMDLWKLREYISETISVFTPYK
EEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NDISVLISHVPNFIHDIETIVNAKYPDFEICWFGHIGDGNLHLNILKPENLSKDEFFGQC
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHH
QTVNNSIFEVVQKYGGSISAEHGVGMTKKPYLHYSRSETEIDYLREIKKVLDPNGIMNRG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC
KIFDL
CEECC
>Mature Secondary Structure 
TDFSALPTLEAGHALTTLALTEQVLSILQEQHGYDASQIKTDTVSLEHWGKDWTKHFAP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEHHHHCCHHHHHCCC
APSAIVFPKSTKQVQALVKLANEYNIVITPSGGRTGLSAGAVASNGEIVVSLDKMNKIVQ
CCCEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEECCCCEEEEHHHHHHHHE
FYPADRLVEVEAGVITAQLQQFAEAQDLYYPVDFASAGSSQIGGNIGTNAGGIKVIRYGM
ECCCCCEEEECCCHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECC
TRQWVMGLTVVTGKGDILKLNRGMIKNATGYDLRQLFIGAEGTLGIVTEAQMKLNRPPQD
CHHEEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHEECCCCCEEEEEEHHHHCCCCCCC
LTVMVLGMDEFDHVMQVLAAFQAQIDLTAFEFFDEVAVDKLMATGHVQEPFEARTKYYVL
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEE
LEFEAPYEPIMDKAMAIFEDCMDNGWIVDGVMSQSMAQAMDLWKLREYISETISVFTPYK
EEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NDISVLISHVPNFIHDIETIVNAKYPDFEICWFGHIGDGNLHLNILKPENLSKDEFFGQC
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHH
QTVNNSIFEVVQKYGGSISAEHGVGMTKKPYLHYSRSETEIDYLREIKKVLDPNGIMNRG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC
KIFDL
CEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]