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The map label for this gene is ocd2 [H]

Identifier: 93005727

GI number: 93005727

Start: 1065558

End: 1066583

Strand: Direct

Name: ocd2 [H]

Synonym: Pcryo_0899

Alternate gene names: 93005727

Gene position: 1065558-1066583 (Clockwise)

Preceding gene: 93005726

Following gene: 93005728

Centisome position: 34.82

GC content: 45.13

Gene sequence:

>1026_bases
ATGCATATTTTAGACAGCAAAACGGTAAAGAGTCAATTGACAATGACCATGGCTATCGACTCAATCGAGCAGCTGTTGAC
CTTACAAGTGCAGCATCCAGAGTGGATTAAGTGCCCTGAGCGCTTGGTCATTCCAACTTTCACTGCCAGTGATAAAAACA
GTGGCTCACATCTATCGATGCCTTCAGTATTGTTCGACGGTCATGAAGAATTTGCTATCGTTAAACTGGTCACTATTTGT
CCAGATAATCCAAAGCGAAATCTACCGACGACTACCGCTGTGGTGAGTGTCTCAAACAATGATACGGGTGAAATCCTTGC
CTTCATGGATGGTGTTTATGTCACTCAAGTACGTACGGCAGCGCTATCAGGTATCGCAAGTAAGTATCTAGCAAAGCCAG
ATAGCCAGCAAGTGTCAGTCATCGGCTGTGGCGGGATGGCGTATGAGCAGCTGAATGCTGTGCTCACTGTATGTCCAAAT
ATCAAAAAGGTAACGCTATGGAATCGAGCTGCTAAGGGTGCAAATACCTTTAAAACACAGTTTTCTGAACAGTATCCAGA
ATGGTCGGTCACCATCGAAGTCTGCGAAGATATCGCGAGCGCTGTAAAAGATGCCGATGTGATTAACTTGGCGACACGTG
CAACCGAAGGCTTGTTTGAGATAAACCAAATTAAAGCCGATGTACATATTAATGCGGTAGGCGCTTATCAACCTGAGATG
AAAGAAGTCAGTGATTCCGTCATTGAAGCCTGCTCACACGTTTTCATCGATGATATCGCGGGCGGACGTCATGAAGCGGG
CGATTTAATTCAAGCAGATGCTGCTGAGGGTTGTAGTTGGACTTGGGACGATTTAAGTGGCGATTTAGCGGACTTGGTCA
CAAAAAATATTACTATCAATCAATATAAAAAAGGCATCACCCTGTTCAAATCTGTTGGGGCTGCCAGTTTTGATGCGGCA
GTCGCTTTGAAAGTTGCTCAAAAAGCTAAAGACGAAGGTTTGGGTCAGCTGATTACTTGGGGGTAG

Upstream 100 bases:

>100_bases
CCCAATGGTATTATGAATCGCGGCAAGATTTTTGATCTTTAGTTGAATGGTATCGTAATCAACTAAGACTTATTTTTAAT
AAAAACTATAAGGAACTCTC

Downstream 100 bases:

>100_bases
TGATATGCGCTATGACGTTATTGTGATTGGTGCCGGCATAGTAGGAACCTCTATTGCTTGGCATCTGCAGAAAAACAATG
CTCAAGTTCTCTTGCTAGAT

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MHILDSKTVKSQLTMTMAIDSIEQLLTLQVQHPEWIKCPERLVIPTFTASDKNSGSHLSMPSVLFDGHEEFAIVKLVTIC
PDNPKRNLPTTTAVVSVSNNDTGEILAFMDGVYVTQVRTAALSGIASKYLAKPDSQQVSVIGCGGMAYEQLNAVLTVCPN
IKKVTLWNRAAKGANTFKTQFSEQYPEWSVTIEVCEDIASAVKDADVINLATRATEGLFEINQIKADVHINAVGAYQPEM
KEVSDSVIEACSHVFIDDIAGGRHEAGDLIQADAAEGCSWTWDDLSGDLADLVTKNITINQYKKGITLFKSVGAASFDAA
VALKVAQKAKDEGLGQLITWG

Sequences:

>Translated_341_residues
MHILDSKTVKSQLTMTMAIDSIEQLLTLQVQHPEWIKCPERLVIPTFTASDKNSGSHLSMPSVLFDGHEEFAIVKLVTIC
PDNPKRNLPTTTAVVSVSNNDTGEILAFMDGVYVTQVRTAALSGIASKYLAKPDSQQVSVIGCGGMAYEQLNAVLTVCPN
IKKVTLWNRAAKGANTFKTQFSEQYPEWSVTIEVCEDIASAVKDADVINLATRATEGLFEINQIKADVHINAVGAYQPEM
KEVSDSVIEACSHVFIDDIAGGRHEAGDLIQADAAEGCSWTWDDLSGDLADLVTKNITINQYKKGITLFKSVGAASFDAA
VALKVAQKAKDEGLGQLITWG
>Mature_341_residues
MHILDSKTVKSQLTMTMAIDSIEQLLTLQVQHPEWIKCPERLVIPTFTASDKNSGSHLSMPSVLFDGHEEFAIVKLVTIC
PDNPKRNLPTTTAVVSVSNNDTGEILAFMDGVYVTQVRTAALSGIASKYLAKPDSQQVSVIGCGGMAYEQLNAVLTVCPN
IKKVTLWNRAAKGANTFKTQFSEQYPEWSVTIEVCEDIASAVKDADVINLATRATEGLFEINQIKADVHINAVGAYQPEM
KEVSDSVIEACSHVFIDDIAGGRHEAGDLIQADAAEGCSWTWDDLSGDLADLVTKNITINQYKKGITLFKSVGAASFDAA
VALKVAQKAKDEGLGQLITWG

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=285, Percent_Identity=30.1754385964912, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI4503065, Length=285, Percent_Identity=30.1754385964912, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24642678, Length=269, Percent_Identity=31.9702602230483, Blast_Score=92, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 36879; Mature: 36879

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILDSKTVKSQLTMTMAIDSIEQLLTLQVQHPEWIKCPERLVIPTFTASDKNSGSHLSM
CCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCEEEEEEECCCCCCCCCCCC
PSVLFDGHEEFAIVKLVTICPDNPKRNLPTTTAVVSVSNNDTGEILAFMDGVYVTQVRTA
CHHEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHHH
ALSGIASKYLAKPDSQQVSVIGCGGMAYEQLNAVLTVCPNIKKVTLWNRAAKGANTFKTQ
HHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEHHHCCCCHHHHHH
FSEQYPEWSVTIEVCEDIASAVKDADVINLATRATEGLFEINQIKADVHINAVGAYQPEM
HHHHCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHEEEEEEEEEEEECCCCCHH
KEVSDSVIEACSHVFIDDIAGGRHEAGDLIQADAAEGCSWTWDDLSGDLADLVTKNITIN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEHHHCCCHHHHHHHCCCCHH
QYKKGITLFKSVGAASFDAAVALKVAQKAKDEGLGQLITWG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure
MHILDSKTVKSQLTMTMAIDSIEQLLTLQVQHPEWIKCPERLVIPTFTASDKNSGSHLSM
CCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCEEEEEEECCCCCCCCCCCC
PSVLFDGHEEFAIVKLVTICPDNPKRNLPTTTAVVSVSNNDTGEILAFMDGVYVTQVRTA
CHHEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHHH
ALSGIASKYLAKPDSQQVSVIGCGGMAYEQLNAVLTVCPNIKKVTLWNRAAKGANTFKTQ
HHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEHHHCCCCHHHHHH
FSEQYPEWSVTIEVCEDIASAVKDADVINLATRATEGLFEINQIKADVHINAVGAYQPEM
HHHHCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHEEEEEEEEEEEECCCCCHH
KEVSDSVIEACSHVFIDDIAGGRHEAGDLIQADAAEGCSWTWDDLSGDLADLVTKNITIN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEHHHCCCHHHHHHHCCCCHH
QYKKGITLFKSVGAASFDAAVALKVAQKAKDEGLGQLITWG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]