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The map label for this gene is yliI [H]

Identifier: 93005672

GI number: 93005672

Start: 997731

End: 998978

Strand: Direct

Name: yliI [H]

Synonym: Pcryo_0842

Alternate gene names: 93005672

Gene position: 997731-998978 (Clockwise)

Preceding gene: 93005671

Following gene: 93005673

Centisome position: 32.61

GC content: 42.87

Gene sequence:

>1248_bases
ATGATAATAATAAATAGGCAGTATATGAGTAAACCATTAACGTTACCGATAATTATCACAGCATTACTGTTTAGTACTTC
TGCTTGTTCAAATCAATCTGCCACTGATACCAATGCCGATTTGGCAAAATATCAAGAAGCTGAAACCTCAGTAGCAGATG
TTGCAAGTACGGACAAACCTGCCTTTACCACAAAAGCCGTTGCCACCTTTGATGAGCCATGGGCAATGACTGCATTACCT
ATCGTTAGTAATAAACCATCAAAACTGCTTGTCACACAAAAGACAGGCGAATTATTCATTGTTGATACGGCAACAGGTAC
TAAGACAGAAATCGCTAGCGTGCCTAAAGTCGCTTACGGGGGACAAGGCGGTCTTGGTGATATTATTCTTGCACCAGATT
TTGTTACCTCTAACAACGTATATATCAGCTACGTTGAGGCAGGCACTGGTGATGATAGTAATAAATTTGGTGCAAAAGTC
ATTAAAGCCAAACTATCAGGTTTGGATACTGATCAACCAAGTTTGCAGAAGATGGTCCCAATTTGGCAGCAGACGCCAAA
GGTAGATGGGCAAGGGCATTACAGCCACCGTTTATTATTTTCACCTGATGGGCAATATTTATATATCAGCTCAGGCGAAC
GTCAAGAAAAACCTCCTGCTCAAGACATGACTGTCAATTTGGGAAAAATAATACGGTTAAATACTGACGGCTCGATGCCA
ATGGACAATCCATTTGTGAGTAATAATGACATCGCTGCTCAATTTTGGAGCATAGGACATCGTAATGTACTCGGGATGGC
ATTCGATAGTAAAGAGCAGTTGTGGGCGCATGAAATGGGTCCACGAGGTGGTGATGAGTTCAATCTGATTGAAAAAGGTA
AGAATTACGGCTGGCCAATCGTATCAAATGGTCGCAATTATTCTGGTGTGGATATTCCTGATCACAGTACGCGTCCTGAG
CTTGAAGCACCCAAAATCACATGGACACCAGTCATATCCCCTTCATCAATAAGTATGTATTCGACTGGTAAGCACAATGA
TTTTCCGGCGTGGCAAGGTAATGCGCTGATCAGTGGTTTATCCTCCAAAGCGCTGATAGTTGTTAATTTCGATGAAAATA
ATGGTGCGACTGAGCGCTATCGCTATGATATGGGCGAGCGTATTCGTAGTGTACTGGTTGCAGATGGGCAGGTTTGGGCG
CTTGAAGATGGTAATGGTGGGCGATTACTGAGACTATCGCCTAAGTAG

Upstream 100 bases:

>100_bases
TTTGTGCGCCATCATTATTTTTACTCTTGCCATACTTAGATTATGTTATAAATAATCTAAGCTCTAATTATATAAATATA
AAATTTATGGAGATAAAAGA

Downstream 100 bases:

>100_bases
GATCGTGCTAAAGTTGTTTTTATTTGTATAGTTATTTAGTTATTCTAAAAAAAATTATTAATTTATTTAGAAAAAATTAA
GGGTTTTATCAAGTTTTAAT

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MIIINRQYMSKPLTLPIIITALLFSTSACSNQSATDTNADLAKYQEAETSVADVASTDKPAFTTKAVATFDEPWAMTALP
IVSNKPSKLLVTQKTGELFIVDTATGTKTEIASVPKVAYGGQGGLGDIILAPDFVTSNNVYISYVEAGTGDDSNKFGAKV
IKAKLSGLDTDQPSLQKMVPIWQQTPKVDGQGHYSHRLLFSPDGQYLYISSGERQEKPPAQDMTVNLGKIIRLNTDGSMP
MDNPFVSNNDIAAQFWSIGHRNVLGMAFDSKEQLWAHEMGPRGGDEFNLIEKGKNYGWPIVSNGRNYSGVDIPDHSTRPE
LEAPKITWTPVISPSSISMYSTGKHNDFPAWQGNALISGLSSKALIVVNFDENNGATERYRYDMGERIRSVLVADGQVWA
LEDGNGGRLLRLSPK

Sequences:

>Translated_415_residues
MIIINRQYMSKPLTLPIIITALLFSTSACSNQSATDTNADLAKYQEAETSVADVASTDKPAFTTKAVATFDEPWAMTALP
IVSNKPSKLLVTQKTGELFIVDTATGTKTEIASVPKVAYGGQGGLGDIILAPDFVTSNNVYISYVEAGTGDDSNKFGAKV
IKAKLSGLDTDQPSLQKMVPIWQQTPKVDGQGHYSHRLLFSPDGQYLYISSGERQEKPPAQDMTVNLGKIIRLNTDGSMP
MDNPFVSNNDIAAQFWSIGHRNVLGMAFDSKEQLWAHEMGPRGGDEFNLIEKGKNYGWPIVSNGRNYSGVDIPDHSTRPE
LEAPKITWTPVISPSSISMYSTGKHNDFPAWQGNALISGLSSKALIVVNFDENNGATERYRYDMGERIRSVLVADGQVWA
LEDGNGGRLLRLSPK
>Mature_415_residues
MIIINRQYMSKPLTLPIIITALLFSTSACSNQSATDTNADLAKYQEAETSVADVASTDKPAFTTKAVATFDEPWAMTALP
IVSNKPSKLLVTQKTGELFIVDTATGTKTEIASVPKVAYGGQGGLGDIILAPDFVTSNNVYISYVEAGTGDDSNKFGAKV
IKAKLSGLDTDQPSLQKMVPIWQQTPKVDGQGHYSHRLLFSPDGQYLYISSGERQEKPPAQDMTVNLGKIIRLNTDGSMP
MDNPFVSNNDIAAQFWSIGHRNVLGMAFDSKEQLWAHEMGPRGGDEFNLIEKGKNYGWPIVSNGRNYSGVDIPDHSTRPE
LEAPKITWTPVISPSSISMYSTGKHNDFPAWQGNALISGLSSKALIVVNFDENNGATERYRYDMGERIRSVLVADGQVWA
LEDGNGGRLLRLSPK

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=352, Percent_Identity=37.7840909090909, Blast_Score=215, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 45228; Mature: 45228

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIINRQYMSKPLTLPIIITALLFSTSACSNQSATDTNADLAKYQEAETSVADVASTDKP
CEEEECHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
AFTTKAVATFDEPWAMTALPIVSNKPSKLLVTQKTGELFIVDTATGTKTEIASVPKVAYG
CEEEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCEEEC
GQGGLGDIILAPDFVTSNNVYISYVEAGTGDDSNKFGAKVIKAKLSGLDTDQPSLQKMVP
CCCCCCCEEECCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
IWQQTPKVDGQGHYSHRLLFSPDGQYLYISSGERQEKPPAQDMTVNLGKIIRLNTDGSMP
HHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCEEEECCEEEEEECCCCCC
MDNPFVSNNDIAAQFWSIGHRNVLGMAFDSKEQLWAHEMGPRGGDEFNLIEKGKNYGWPI
CCCCCCCCCCHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCEECCCCCCCCE
VSNGRNYSGVDIPDHSTRPELEAPKITWTPVISPSSISMYSTGKHNDFPAWQGNALISGL
EECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHEECC
SSKALIVVNFDENNGATERYRYDMGERIRSVLVADGQVWALEDGNGGRLLRLSPK
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEEECCC
>Mature Secondary Structure
MIIINRQYMSKPLTLPIIITALLFSTSACSNQSATDTNADLAKYQEAETSVADVASTDKP
CEEEECHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
AFTTKAVATFDEPWAMTALPIVSNKPSKLLVTQKTGELFIVDTATGTKTEIASVPKVAYG
CEEEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCEEEC
GQGGLGDIILAPDFVTSNNVYISYVEAGTGDDSNKFGAKVIKAKLSGLDTDQPSLQKMVP
CCCCCCCEEECCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
IWQQTPKVDGQGHYSHRLLFSPDGQYLYISSGERQEKPPAQDMTVNLGKIIRLNTDGSMP
HHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCEEEECCEEEEEECCCCCC
MDNPFVSNNDIAAQFWSIGHRNVLGMAFDSKEQLWAHEMGPRGGDEFNLIEKGKNYGWPI
CCCCCCCCCCHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCEECCCCCCCCE
VSNGRNYSGVDIPDHSTRPELEAPKITWTPVISPSSISMYSTGKHNDFPAWQGNALISGL
EECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHEECC
SSKALIVVNFDENNGATERYRYDMGERIRSVLVADGQVWALEDGNGGRLLRLSPK
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]