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The map label for this gene is dppC [H]

Identifier: 93005587

GI number: 93005587

Start: 890199

End: 891113

Strand: Reverse

Name: dppC [H]

Synonym: Pcryo_0757

Alternate gene names: 93005587

Gene position: 891113-890199 (Counterclockwise)

Preceding gene: 93005588

Following gene: 93005586

Centisome position: 29.12

GC content: 48.31

Gene sequence:

>915_bases
ATGAAGCCTTCTGTAGTTCCTTCTGACATTGCTCCGGTTGCGCCTAAGCCGCCGACTTCTTGGCAGCTGTTTTTATACAC
CTTTTGCCGAAATAAAGGCGCGGTACTGGGTTTTATAGTCTTGATGCTGATGGTCATCGTCGCAATCTTGGCCCCTACCA
TTGCCCCTTATGACCCTTATGAATTATTCACCGGTAAAGAGCAATTGCCGCCCTCCTTCTTTAATGGCGGTGATTCGATG
TTCTTTTTGGGCACCGATGATGCCGGTCGTGATACGCTCTCGCGCGTCATGCACGGCGCACGTTATTCATTATTCATCGG
TATCAGCGCCACTTCGATAGCGATGATTGTGGGCGTATCGTTAGGACTAAGCGCTGCCTTTTGGCCCAAGGTTTGGGGCA
AAGCGGTCATGCTAGTGAATGATATCTTGATGTCTTATCCAAGCTTGCTGCTCGCCATTATCATTGCCGCTATCTTAGGG
CCTTCGATGACCAACACCATCATTACTATTGCCTTGGTATGTACGCCGCCTTTTATTAGGTTGACCCGCGCAACAGCAAT
GGTTGAGCTGCAACGTGAGTATTTTATTGCTTCACAGGTCATGGGTGCAGGCGTCTTAAGATTATTATTTATCACGATAT
TACCCAATTGTATGGCGCCATTAATCGTCCAAGCGACCATGATTTTCTCTACTGCTATTTTGGAAGCCGGCGCGATTGGT
TTCTTAGGTTTCGGTGTTCAACCCCCTGATGCTGAGTGGGGTGCGATGCTAGGTACTGCTCGCCAATATATCCAGAGCAA
TGTGTGGTTAGCGATTTGGCCCGGTGTGGCGATTTTCTTAGCCGCATTGTCCATCAATCTAACGGGTGACGGTCTGCGTG
ATGCCTTAGATCCAAAATTGAAGCAGGTATCTTAA

Upstream 100 bases:

>100_bases
AAGCGCATGCTAAGTTAGCTGAAACCATAAGCGACTTATCCTAATAAAGTAAGCAAGCCAGTGGAGTAAAACAAGGTCTG
ATTCACTAAAGGAATATCCA

Downstream 100 bases:

>100_bases
TGAACGACTCTCAAGTAAATAGCCCAATAGCAAATAACCTTGCCACAGACAACCCATTACTCCTCGATATTGAGCATCTA
TCGGTGACTTTTGGAGAAGG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKPSVVPSDIAPVAPKPPTSWQLFLYTFCRNKGAVLGFIVLMLMVIVAILAPTIAPYDPYELFTGKEQLPPSFFNGGDSM
FFLGTDDAGRDTLSRVMHGARYSLFIGISATSIAMIVGVSLGLSAAFWPKVWGKAVMLVNDILMSYPSLLLAIIIAAILG
PSMTNTIITIALVCTPPFIRLTRATAMVELQREYFIASQVMGAGVLRLLFITILPNCMAPLIVQATMIFSTAILEAGAIG
FLGFGVQPPDAEWGAMLGTARQYIQSNVWLAIWPGVAIFLAALSINLTGDGLRDALDPKLKQVS

Sequences:

>Translated_304_residues
MKPSVVPSDIAPVAPKPPTSWQLFLYTFCRNKGAVLGFIVLMLMVIVAILAPTIAPYDPYELFTGKEQLPPSFFNGGDSM
FFLGTDDAGRDTLSRVMHGARYSLFIGISATSIAMIVGVSLGLSAAFWPKVWGKAVMLVNDILMSYPSLLLAIIIAAILG
PSMTNTIITIALVCTPPFIRLTRATAMVELQREYFIASQVMGAGVLRLLFITILPNCMAPLIVQATMIFSTAILEAGAIG
FLGFGVQPPDAEWGAMLGTARQYIQSNVWLAIWPGVAIFLAALSINLTGDGLRDALDPKLKQVS
>Mature_304_residues
MKPSVVPSDIAPVAPKPPTSWQLFLYTFCRNKGAVLGFIVLMLMVIVAILAPTIAPYDPYELFTGKEQLPPSFFNGGDSM
FFLGTDDAGRDTLSRVMHGARYSLFIGISATSIAMIVGVSLGLSAAFWPKVWGKAVMLVNDILMSYPSLLLAIIIAAILG
PSMTNTIITIALVCTPPFIRLTRATAMVELQREYFIASQVMGAGVLRLLFITILPNCMAPLIVQATMIFSTAILEAGAIG
FLGFGVQPPDAEWGAMLGTARQYIQSNVWLAIWPGVAIFLAALSINLTGDGLRDALDPKLKQVS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=289, Percent_Identity=50.1730103806228, Blast_Score=249, Evalue=1e-67,
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=38.86925795053, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=39.463601532567, Blast_Score=187, Evalue=8e-49,
Organism=Escherichia coli, GI1787549, Length=291, Percent_Identity=36.0824742268041, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=36.9918699186992, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1787498, Length=279, Percent_Identity=29.7491039426523, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788505, Length=237, Percent_Identity=27.0042194092827, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32689; Mature: 32689

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSVVPSDIAPVAPKPPTSWQLFLYTFCRNKGAVLGFIVLMLMVIVAILAPTIAPYDPY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
ELFTGKEQLPPSFFNGGDSMFFLGTDDAGRDTLSRVMHGARYSLFIGISATSIAMIVGVS
HHCCCCHHCCCHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
LGLSAAFWPKVWGKAVMLVNDILMSYPSLLLAIIIAAILGPSMTNTIITIALVCTPPFIR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
LTRATAMVELQREYFIASQVMGAGVLRLLFITILPNCMAPLIVQATMIFSTAILEAGAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FLGFGVQPPDAEWGAMLGTARQYIQSNVWLAIWPGVAIFLAALSINLTGDGLRDALDPKL
HEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHCCCHH
KQVS
HCCC
>Mature Secondary Structure
MKPSVVPSDIAPVAPKPPTSWQLFLYTFCRNKGAVLGFIVLMLMVIVAILAPTIAPYDPY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
ELFTGKEQLPPSFFNGGDSMFFLGTDDAGRDTLSRVMHGARYSLFIGISATSIAMIVGVS
HHCCCCHHCCCHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
LGLSAAFWPKVWGKAVMLVNDILMSYPSLLLAIIIAAILGPSMTNTIITIALVCTPPFIR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
LTRATAMVELQREYFIASQVMGAGVLRLLFITILPNCMAPLIVQATMIFSTAILEAGAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FLGFGVQPPDAEWGAMLGTARQYIQSNVWLAIWPGVAIFLAALSINLTGDGLRDALDPKL
HEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHCCCHH
KQVS
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]