Click here to switch to the map view.

The map label for this gene is 93005519

Identifier: 93005519

GI number: 93005519

Start: 816644

End: 817354

Strand: Reverse

Name: 93005519

Synonym: Pcryo_0689

Alternate gene names: NA

Gene position: 817354-816644 (Counterclockwise)

Preceding gene: 93005522

Following gene: 93005518

Centisome position: 26.71

GC content: 43.46

Gene sequence:

>711_bases
ATGTCTGCTTTAGCCAACTTACAACAGCACCTTGACCGCTTTTGGGCGCTGCCACATCATGAAGACGCTGCATTGAATAA
GAAGCTTAATGAAGTGCAATCATGGCAACAAGCCCGTATCAAGCGTACGCATAGCACGCTGTTTGAGCAACCAAAAAACC
AGCTAATGGCAGATTATTTTTTAACGCAGCTGTATGGTGGTGATGAATTTAAAGTATTGGCAGAACAATTAGGGCGCATT
CTCCCGAAAGCCAAGAAACTTGAGCGTCTTGCCAAAGAGTCATCTTTAGAAGCTGGCAGTATGGGTATTCAAGCGTCTAT
ATTGGCGATTGAGCTCGACTTGCATTTGGCGCAGTGGTTACTCGAACAAGAGTTAGCTGTCAATGAAGAAAACATGCTAC
TCGCTTACCGTACGGTTGATGAAGCTATTGAGCGTCGCGTACAGATTAATAATTTAAAAGACGTTTGCTATCGTACTGAC
AAAGACTTGAATTCATTTATGCTCAAAAAAGCTTTTGCGATGGCTAAAGGCACCGCGTATCGCTACAACTTTCAGCCGCT
TTATGATTTTATCGATTCAGGCTTTAAAGCCATGAAACCATTAAAAAGTGTGAGCAGCTTTATTGAACCGTTTTGCGCGC
GCGAGCTTGAAGTTATTGATGAAGTCCATGCCATGGATAATGACGGTAAGCCCGCTGCGTTTGCTGTATGA

Upstream 100 bases:

>100_bases
GCTGCCTATAAGTAGAAAACTTAGCGCTAACCAGCCCCCTTATTATCCAGCTTTTATTATCAACTTGATGACTATTATTA
TTTTTATAGGATGACCTGCC

Downstream 100 bases:

>100_bases
TAAGCGCTATTGTCTCAATAACTATTAGTATTTTATCTGACTAAAAACAAGCATAAAAATAAATCATAGGACACCGCGAT
GACTGATCATGTAAATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSALANLQQHLDRFWALPHHEDAALNKKLNEVQSWQQARIKRTHSTLFEQPKNQLMADYFLTQLYGGDEFKVLAEQLGRI
LPKAKKLERLAKESSLEAGSMGIQASILAIELDLHLAQWLLEQELAVNEENMLLAYRTVDEAIERRVQINNLKDVCYRTD
KDLNSFMLKKAFAMAKGTAYRYNFQPLYDFIDSGFKAMKPLKSVSSFIEPFCARELEVIDEVHAMDNDGKPAAFAV

Sequences:

>Translated_236_residues
MSALANLQQHLDRFWALPHHEDAALNKKLNEVQSWQQARIKRTHSTLFEQPKNQLMADYFLTQLYGGDEFKVLAEQLGRI
LPKAKKLERLAKESSLEAGSMGIQASILAIELDLHLAQWLLEQELAVNEENMLLAYRTVDEAIERRVQINNLKDVCYRTD
KDLNSFMLKKAFAMAKGTAYRYNFQPLYDFIDSGFKAMKPLKSVSSFIEPFCARELEVIDEVHAMDNDGKPAAFAV
>Mature_235_residues
SALANLQQHLDRFWALPHHEDAALNKKLNEVQSWQQARIKRTHSTLFEQPKNQLMADYFLTQLYGGDEFKVLAEQLGRIL
PKAKKLERLAKESSLEAGSMGIQASILAIELDLHLAQWLLEQELAVNEENMLLAYRTVDEAIERRVQINNLKDVCYRTDK
DLNSFMLKKAFAMAKGTAYRYNFQPLYDFIDSGFKAMKPLKSVSSFIEPFCARELEVIDEVHAMDNDGKPAAFAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27040; Mature: 26909

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALANLQQHLDRFWALPHHEDAALNKKLNEVQSWQQARIKRTHSTLFEQPKNQLMADYF
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQLYGGDEFKVLAEQLGRILPKAKKLERLAKESSLEAGSMGIQASILAIELDLHLAQWL
HHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LEQELAVNEENMLLAYRTVDEAIERRVQINNLKDVCYRTDKDLNSFMLKKAFAMAKGTAY
HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE
RYNFQPLYDFIDSGFKAMKPLKSVSSFIEPFCARELEVIDEVHAMDNDGKPAAFAV
EECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SALANLQQHLDRFWALPHHEDAALNKKLNEVQSWQQARIKRTHSTLFEQPKNQLMADYF
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQLYGGDEFKVLAEQLGRILPKAKKLERLAKESSLEAGSMGIQASILAIELDLHLAQWL
HHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LEQELAVNEENMLLAYRTVDEAIERRVQINNLKDVCYRTDKDLNSFMLKKAFAMAKGTAY
HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE
RYNFQPLYDFIDSGFKAMKPLKSVSSFIEPFCARELEVIDEVHAMDNDGKPAAFAV
EECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA