| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is gltJ [H]
Identifier: 93005166
GI number: 93005166
Start: 405914
End: 406660
Strand: Direct
Name: gltJ [H]
Synonym: Pcryo_0335
Alternate gene names: 93005166
Gene position: 405914-406660 (Clockwise)
Preceding gene: 93005165
Following gene: 93005167
Centisome position: 13.27
GC content: 44.98
Gene sequence:
>747_bases ATGAATTATAGCTGGAACTGGGGTGTGCTGTTTGAGCAGACCGGTATCGGTAGCGAGCTGTATATCCATTGGATGATTAC TGGTCTTGGCTGGTTGTTATTGATTGGCAGTATTGCATGGGCAATCGCCATGGTGGTTGGTACTATTTTTGGCATCATGC GTACCTTGCCGAATAAAGGCGCACGTGCTATCGGTACTGCTTATGTGACGTTTTTCCGCAATATCCCTTTATTGGTACAA TTATTTTTCTGGTTTTATATCGCCCCAGGTTGGCTCACGCCATCCATACAAGAGTGGTGGTATAAAGACTTGTCTCCCAA TACCTCAGCCATGCTGTCAGCCAGTATCGGTCTTGGTTTATTTACCGCAGCTCGTATTGTTGAACAAGTACGTACTGGTA TCGAGTCACTACCTCAAGGGCAGATCAATGCTGCCTACGCGCTTGGCTTTAGTATCCCGCAAGCCTATAAAGAAGTACTG CTGCCACAAGCGTTTCGGATTATCTTACCGCCACTGAGCTCAGAGCTGACCAACTGCTTTAAAAACGCCTCAGTTGCGTC TTTGGTTGGGGTAATGGAGCTGATCAGTCAGACCAAAACCATCAGTGAATATACTCAAAACAGTCTTGAGATTTATACCT ATGCGACCATTATTTATCTGGTGTTTAATCTGTCTTTAATTGCCATTATGGGGCTAATTGAACGTAAATTGCGTGTGCCT GGGCTAATTGCAGGGAGTCAAAAATGA
Upstream 100 bases:
>100_bases TCCCTCAACATAGCATGCTTACGCGTTCAGATTGTTTGTCAAATAGTTTGATAGCAGTCTGAAAGCGTGGGCTTTTTAAC CGTTGCTCGGAGAGACAATT
Downstream 100 bases:
>100_bases ATATGACCGAACTTGCAACTGCCTATCCCGGTTTGATGGGTGGCATGCTGACGACTTTAAAAGTATTATTTTTAGCAATC TTAGGCGGTCTCAGCTTAGG
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNYSWNWGVLFEQTGIGSELYIHWMITGLGWLLLIGSIAWAIAMVVGTIFGIMRTLPNKGARAIGTAYVTFFRNIPLLVQ LFFWFYIAPGWLTPSIQEWWYKDLSPNTSAMLSASIGLGLFTAARIVEQVRTGIESLPQGQINAAYALGFSIPQAYKEVL LPQAFRIILPPLSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMGLIERKLRVP GLIAGSQK
Sequences:
>Translated_248_residues MNYSWNWGVLFEQTGIGSELYIHWMITGLGWLLLIGSIAWAIAMVVGTIFGIMRTLPNKGARAIGTAYVTFFRNIPLLVQ LFFWFYIAPGWLTPSIQEWWYKDLSPNTSAMLSASIGLGLFTAARIVEQVRTGIESLPQGQINAAYALGFSIPQAYKEVL LPQAFRIILPPLSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMGLIERKLRVP GLIAGSQK >Mature_248_residues MNYSWNWGVLFEQTGIGSELYIHWMITGLGWLLLIGSIAWAIAMVVGTIFGIMRTLPNKGARAIGTAYVTFFRNIPLLVQ LFFWFYIAPGWLTPSIQEWWYKDLSPNTSAMLSASIGLGLFTAARIVEQVRTGIESLPQGQINAAYALGFSIPQAYKEVL LPQAFRIILPPLSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMGLIERKLRVP GLIAGSQK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=246, Percent_Identity=42.6829268292683, Blast_Score=231, Evalue=5e-62, Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=30.8411214953271, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=31.0185185185185, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI48994930, Length=226, Percent_Identity=29.2035398230088, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=32.4200913242009, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082239, Length=213, Percent_Identity=26.2910798122066, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788646, Length=201, Percent_Identity=25.8706467661692, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787087, Length=171, Percent_Identity=32.1637426900585, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27586; Mature: 27586
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYSWNWGVLFEQTGIGSELYIHWMITGLGWLLLIGSIAWAIAMVVGTIFGIMRTLPNKG CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ARAIGTAYVTFFRNIPLLVQLFFWFYIAPGWLTPSIQEWWYKDLSPNTSAMLSASIGLGL HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH FTAARIVEQVRTGIESLPQGQINAAYALGFSIPQAYKEVLLPQAFRIILPPLSSELTNCF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMGLIERKLRVP HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLIAGSQK CCCCCCCC >Mature Secondary Structure MNYSWNWGVLFEQTGIGSELYIHWMITGLGWLLLIGSIAWAIAMVVGTIFGIMRTLPNKG CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ARAIGTAYVTFFRNIPLLVQLFFWFYIAPGWLTPSIQEWWYKDLSPNTSAMLSASIGLGL HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH FTAARIVEQVRTGIESLPQGQINAAYALGFSIPQAYKEVLLPQAFRIILPPLSSELTNCF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMGLIERKLRVP HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLIAGSQK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]