| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is gltI [H]
Identifier: 93005165
GI number: 93005165
Start: 404812
End: 405804
Strand: Direct
Name: gltI [H]
Synonym: Pcryo_0334
Alternate gene names: 93005165
Gene position: 404812-405804 (Clockwise)
Preceding gene: 93005163
Following gene: 93005166
Centisome position: 13.23
GC content: 41.49
Gene sequence:
>993_bases ATGACTTACTTACTTTCTACCTCTATATCCAAACCATTAACGTTAGTTGCCTTTATGGCACTAGCTCTAGCAGGCTGTAA CAACAATAGCCAAACCAGTAATGAGGCGACGCCAGCAGATGGAGCAACCACCGAGGCGACGGCAAATACCAACGGCACCT TAGATAAAATTAAAGAATCAGGCACCATCGTCGTCGGTCACCGTGACTCTTCCATTCCGTTCTCATACATCGCTGATGAT CCAAATCAGCCGATCGGCTATGCTCATGATTTAGAGATGAAAGTGGTAGAAGCTGTCAAACAAAAGCTCAATATGCCAGA TCTAAAAATCCGCTATAACCTTATTACCTCACAAACACGCATCCCATTAGTACAAAATGGTACAGTAGATTTTGAGTGTG GTTCAACAACCAATAATGAAGAGCGTCAGAAACAAGTCGCTTTTTCTAACGGCTTCTTTGAAATCGGTACGCGTTTATTG ACCAAAAAAGATTCAGGTATCCAAGGTTTCGATGATTTAAAGGGTAAAACCTTAGTCACGACTGCAGGTACAACTTCAGA GCGTTATATTCGTGAATACAACGACGATAAAAAGATGAATATCAATGTCATCTCAGCAAAAGACCATGGCGAAGGTTTCT TGATGCTAGAGAATGGTCGTGCCGATGCCTTTATGATGGATGATGTATTGCTAGCAGGCGAAAAAGCCAAAGCCAAAAAT CCCGATGAATGGGTCATTGTTGGTGAGCCACAATCGTTTGAGATTTATGGTTGTATGATGCGTAAAGACGATCCAGAATT TAAAGCCGTGGTCGATGAAGCACTAGCCAATGTCTTTAAGTCAGGCGAGATCAATAGCATCTATGACAAATGGTTCTTAA ATCCAATTCCACCAAAAAATGTCAATCTAAAGTTTGAGATGTCAGATAACTTAAAAGCGTTGATTGCCAATCCACATGAT AGCGATCAGCCAAAAGTAGCGACTGCGCAATAA
Upstream 100 bases:
>100_bases ATAGGGCCCATAAACGCAAATTTATAGCGTTTTTCTACGGTTTCTATCGCACTTAAATGTCATTCCAATCTTGTGGCAAT GTGATAAAAGGACATATCTC
Downstream 100 bases:
>100_bases CGCTTCTTGTCCCTCAACATAGCATGCTTACGCGTTCAGATTGTTTGTCAAATAGTTTGATAGCAGTCTGAAAGCGTGGG CTTTTTAACCGTTGCTCGGA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTYLLSTSISKPLTLVAFMALALAGCNNNSQTSNEATPADGATTEATANTNGTLDKIKESGTIVVGHRDSSIPFSYIADD PNQPIGYAHDLEMKVVEAVKQKLNMPDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNNEERQKQVAFSNGFFEIGTRLL TKKDSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDKKMNINVISAKDHGEGFLMLENGRADAFMMDDVLLAGEKAKAKN PDEWVIVGEPQSFEIYGCMMRKDDPEFKAVVDEALANVFKSGEINSIYDKWFLNPIPPKNVNLKFEMSDNLKALIANPHD SDQPKVATAQ
Sequences:
>Translated_330_residues MTYLLSTSISKPLTLVAFMALALAGCNNNSQTSNEATPADGATTEATANTNGTLDKIKESGTIVVGHRDSSIPFSYIADD PNQPIGYAHDLEMKVVEAVKQKLNMPDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNNEERQKQVAFSNGFFEIGTRLL TKKDSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDKKMNINVISAKDHGEGFLMLENGRADAFMMDDVLLAGEKAKAKN PDEWVIVGEPQSFEIYGCMMRKDDPEFKAVVDEALANVFKSGEINSIYDKWFLNPIPPKNVNLKFEMSDNLKALIANPHD SDQPKVATAQ >Mature_329_residues TYLLSTSISKPLTLVAFMALALAGCNNNSQTSNEATPADGATTEATANTNGTLDKIKESGTIVVGHRDSSIPFSYIADDP NQPIGYAHDLEMKVVEAVKQKLNMPDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNNEERQKQVAFSNGFFEIGTRLLT KKDSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDKKMNINVISAKDHGEGFLMLENGRADAFMMDDVLLAGEKAKAKNP DEWVIVGEPQSFEIYGCMMRKDDPEFKAVVDEALANVFKSGEINSIYDKWFLNPIPPKNVNLKFEMSDNLKALIANPHDS DQPKVATAQ
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=268, Percent_Identity=61.1940298507463, Blast_Score=347, Evalue=7e-97, Organism=Escherichia coli, GI1788228, Length=243, Percent_Identity=26.7489711934156, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787085, Length=156, Percent_Identity=32.0512820512821, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787031, Length=237, Percent_Identity=25.7383966244726, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1788649, Length=178, Percent_Identity=27.5280898876405, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 36364; Mature: 36233
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLLSTSISKPLTLVAFMALALAGCNNNSQTSNEATPADGATTEATANTNGTLDKIKES CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC GTIVVGHRDSSIPFSYIADDPNQPIGYAHDLEMKVVEAVKQKLNMPDLKIRYNLITSQTR CEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC IPLVQNGTVDFECGSTTNNEERQKQVAFSNGFFEIGTRLLTKKDSGIQGFDDLKGKTLVT CCEEECCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHEECCCCCCCCHHHCCCCEEEE TAGTTSERYIREYNDDKKMNINVISAKDHGEGFLMLENGRADAFMMDDVLLAGEKAKAKN ECCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEECCEEEECCCCCCCC PDEWVIVGEPQSFEIYGCMMRKDDPEFKAVVDEALANVFKSGEINSIYDKWFLNPIPPKN CCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC VNLKFEMSDNLKALIANPHDSDQPKVATAQ CEEEEEECCCCEEEEECCCCCCCCCEECCC >Mature Secondary Structure TYLLSTSISKPLTLVAFMALALAGCNNNSQTSNEATPADGATTEATANTNGTLDKIKES EEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC GTIVVGHRDSSIPFSYIADDPNQPIGYAHDLEMKVVEAVKQKLNMPDLKIRYNLITSQTR CEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC IPLVQNGTVDFECGSTTNNEERQKQVAFSNGFFEIGTRLLTKKDSGIQGFDDLKGKTLVT CCEEECCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHEECCCCCCCCHHHCCCCEEEE TAGTTSERYIREYNDDKKMNINVISAKDHGEGFLMLENGRADAFMMDDVLLAGEKAKAKN ECCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEECCEEEECCCCCCCC PDEWVIVGEPQSFEIYGCMMRKDDPEFKAVVDEALANVFKSGEINSIYDKWFLNPIPPKN CCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC VNLKFEMSDNLKALIANPHDSDQPKVATAQ CEEEEEECCCCEEEEECCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]