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The map label for this gene is yraP [C]

Identifier: 92114325

GI number: 92114325

Start: 2479875

End: 2480441

Strand: Direct

Name: yraP [C]

Synonym: Csal_2203

Alternate gene names: 92114325

Gene position: 2479875-2480441 (Clockwise)

Preceding gene: 92114324

Following gene: 92114331

Centisome position: 67.08

GC content: 61.2

Gene sequence:

>567_bases
ATGACACGACCGCTCATTCTGACCCTTTTCGTCAGCCTCGCACTCGCCCTGGCCGGCTGCGCCTCGCCCGCCTCCGACGG
ACAAGGCGGCGAGAATTACGGCAAGCGCACCGCCGGCATGCAGGTCGAAGACGAGAACATCCAGAGCAAGATCTCCGACA
ACCTCGTGCGTACCGACGCGCGCTTCCGCGATGCGCATCTCAACATCGACAGTTACAACGGCATGGTGCTCTTGACCGGT
CAGGTCGCCAGCGACGAACTCAAGCAAAAGGCAGGCAATGTCGCGGAACAGGTCAGGCAGGTTCGTCGCGTGCACAATGA
ACTGGAGGTCGCCGCCAATACGCCGATCGGTCAGCGCATGACGGACACCTGGCTCACCGGACGCATCAAGGCGAACCTGG
CCACCGACGAACGCATCGACGGCAGCCGGATCCGGGTGATTACCGAGAACAGCACGGTCTACCTGATGGGGATGGTCAAT
CACCGGGAGGCGGATATCGTGGTCGATATCGCCTCCCAGATTGGAGGGGTTCAGCGCATCGTCAAGGTGTTCGAATACCT
CGACTGA

Upstream 100 bases:

>100_bases
TCCACGGCACGCATCCAGGAAGTGCATCTGCTCGCGATACACTGCCTGTGCGACTTGATCGACCAACAACTCTTCGGCAG
CACAGAGTAAGGATACCGTC

Downstream 100 bases:

>100_bases
TTGCCCCCTCCGATCGCGTACCAGGGGGAGTTACTTCACCACACGCAATGACGGGCGCCCCTTGGTACGCGGGGCCTCGT
CATCCTGATCACCGCTATCG

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTRPLILTLFVSLALALAGCASPASDGQGGENYGKRTAGMQVEDENIQSKISDNLVRTDARFRDAHLNIDSYNGMVLLTG
QVASDELKQKAGNVAEQVRQVRRVHNELEVAANTPIGQRMTDTWLTGRIKANLATDERIDGSRIRVITENSTVYLMGMVN
HREADIVVDIASQIGGVQRIVKVFEYLD

Sequences:

>Translated_188_residues
MTRPLILTLFVSLALALAGCASPASDGQGGENYGKRTAGMQVEDENIQSKISDNLVRTDARFRDAHLNIDSYNGMVLLTG
QVASDELKQKAGNVAEQVRQVRRVHNELEVAANTPIGQRMTDTWLTGRIKANLATDERIDGSRIRVITENSTVYLMGMVN
HREADIVVDIASQIGGVQRIVKVFEYLD
>Mature_187_residues
TRPLILTLFVSLALALAGCASPASDGQGGENYGKRTAGMQVEDENIQSKISDNLVRTDARFRDAHLNIDSYNGMVLLTGQ
VASDELKQKAGNVAEQVRQVRRVHNELEVAANTPIGQRMTDTWLTGRIKANLATDERIDGSRIRVITENSTVYLMGMVNH
READIVVDIASQIGGVQRIVKVFEYLD

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=152, Percent_Identity=33.5526315789474, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20671; Mature: 20540

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPLILTLFVSLALALAGCASPASDGQGGENYGKRTAGMQVEDENIQSKISDNLVRTDA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCEECHHHHHHHHHHHHHHCCC
RFRDAHLNIDSYNGMVLLTGQVASDELKQKAGNVAEQVRQVRRVHNELEVAANTPIGQRM
HHHHEEECEECCCCEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TDTWLTGRIKANLATDERIDGSRIRVITENSTVYLMGMVNHREADIVVDIASQIGGVQRI
HHHHHEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHEEEHHHHHCHHHHH
VKVFEYLD
HHHHHHCC
>Mature Secondary Structure 
TRPLILTLFVSLALALAGCASPASDGQGGENYGKRTAGMQVEDENIQSKISDNLVRTDA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCEECHHHHHHHHHHHHHHCCC
RFRDAHLNIDSYNGMVLLTGQVASDELKQKAGNVAEQVRQVRRVHNELEVAANTPIGQRM
HHHHEEECEECCCCEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TDTWLTGRIKANLATDERIDGSRIRVITENSTVYLMGMVNHREADIVVDIASQIGGVQRI
HHHHHEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHEEEHHHHHCHHHHH
VKVFEYLD
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]