| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yhcB [C]
Identifier: 92114331
GI number: 92114331
Start: 2484164
End: 2484685
Strand: Direct
Name: yhcB [C]
Synonym: Csal_2209
Alternate gene names: 92114331
Gene position: 2484164-2484685 (Clockwise)
Preceding gene: 92114325
Following gene: 92114333
Centisome position: 67.2
GC content: 62.64
Gene sequence:
>522_bases ATGGCCCCAGGCTCGGTATGCCCTCGTACTGCACACCGCATGCCCGTGACATTCAAGGAGAGCATTGTGAACGAGAGCAA CATCGACTGGATCCTGGCCATCGCTTGCTTTCTGGCGGGCATCGGCGTCGGCGCCCTCGGCTACCATTTGCTGAACGCCA ACGTGGCGCGCAATCAGAAAGTCCGCCAACGCCTGGCTGAAGCCGAACTGGAGCTCAGCCAGGTCAAGGATGCGCTGAAC GATCACTTCACCAAGGCCGCCGACCTGGTGACCAGCATTCAGCGTCAGAGCCATGAGCTCGAACAGCAACTGGCACAAGG GGCCGACCGCCTCGTCGACGATCTGCAGCTGAAGCGGCGCCTGCACCAAGGTCAGGATGACGCCGTCACCGACGACGACA CCGACTCTCCCCAGGTGCCACGCGACTACGCAGAAGGCGCTCAAGGCACCCTGGCCGAAAACTACGGGCTGGAGTCACAC AAGCGGCGCGAGACCGAAGAACCGGCACCGCCTCGCTACTGA
Upstream 100 bases:
>100_bases GAAAGCCACCATTATACGCGCCATGCGCACTCTTGCATGACGTCGCGCGACACCTCGTCGCGCTTTTGGGTTTGACCCGT CGCGCCAAGACACCGATATA
Downstream 100 bases:
>100_bases GCGACACTCCGATGCATCGCCGAAACGGCCGCTGTCATGCGGCCGTTGGCGTCTTCGGCCGGCGGGGTGACATCAGGCAG GGTTGTCGATATCCACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAPGSVCPRTAHRMPVTFKESIVNESNIDWILAIACFLAGIGVGALGYHLLNANVARNQKVRQRLAEAELELSQVKDALN DHFTKAADLVTSIQRQSHELEQQLAQGADRLVDDLQLKRRLHQGQDDAVTDDDTDSPQVPRDYAEGAQGTLAENYGLESH KRRETEEPAPPRY
Sequences:
>Translated_173_residues MAPGSVCPRTAHRMPVTFKESIVNESNIDWILAIACFLAGIGVGALGYHLLNANVARNQKVRQRLAEAELELSQVKDALN DHFTKAADLVTSIQRQSHELEQQLAQGADRLVDDLQLKRRLHQGQDDAVTDDDTDSPQVPRDYAEGAQGTLAENYGLESH KRRETEEPAPPRY >Mature_172_residues APGSVCPRTAHRMPVTFKESIVNESNIDWILAIACFLAGIGVGALGYHLLNANVARNQKVRQRLAEAELELSQVKDALND HFTKAADLVTSIQRQSHELEQQLAQGADRLVDDLQLKRRLHQGQDDAVTDDDTDSPQVPRDYAEGAQGTLAENYGLESHK RRETEEPAPPRY
Specific function: Unknown
COG id: COG3105
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19225; Mature: 19093
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPGSVCPRTAHRMPVTFKESIVNESNIDWILAIACFLAGIGVGALGYHLLNANVARNQK CCCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VRQRLAEAELELSQVKDALNDHFTKAADLVTSIQRQSHELEQQLAQGADRLVDDLQLKRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHQGQDDAVTDDDTDSPQVPRDYAEGAQGTLAENYGLESHKRRETEEPAPPRY HHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure APGSVCPRTAHRMPVTFKESIVNESNIDWILAIACFLAGIGVGALGYHLLNANVARNQK CCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VRQRLAEAELELSQVKDALNDHFTKAADLVTSIQRQSHELEQQLAQGADRLVDDLQLKRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHQGQDDAVTDDDTDSPQVPRDYAEGAQGTLAENYGLESHKRRETEEPAPPRY HHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA