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The map label for this gene is ompA [C]

Identifier: 92114181

GI number: 92114181

Start: 2327267

End: 2327869

Strand: Direct

Name: ompA [C]

Synonym: Csal_2059

Alternate gene names: 92114181

Gene position: 2327267-2327869 (Clockwise)

Preceding gene: 161897780

Following gene: 92114182

Centisome position: 62.96

GC content: 59.04

Gene sequence:

>603_bases
ATGACAATCAAGACGCTGCTGGCGGCCTCCGTGGCCACTTCCACATTGTTCGTCTTCACCCCCAATGCCATGGCAGCGCC
CAACCCCGAAGGCCTGTATTTCGGTGTCGGGACCGGCTTCAGCTCGCTGGAGAACGATGACGACGACATCGACGATTTCA
TCGAGTCCGGCAGCGAGGATTTCGATGTGGACGATGACGACAACACCTTCAAGGGTTTCGTGGGCTATAACTTCAACCGC
TACTTCGCCACCGAAGCCTTCTATTCGGATCTCGGTCGCGTCAAGCTCAAGGGCAACGGCACCGCCAATACCGATCTCGA
ATCCGAGGCCTACGGTGTCAGCCTGGTCGGTAAATTGCCCATCACCCAGTGGTTCGAGCTCTTCGCCAAGGCGGGCATGG
CAAAATGGGAAACCGACATCGACGGCAACCTCGGCGGCGCCAGCACCGACCTTGAAGACAACGATGGCGTGGACCCCGTG
TACGGCGCCGGCGCACAGTTCAACTTCAAGCCCTTCCTGGTCCGTGCCGAGTACGAACGCTACGACTTCGACAGCGACTA
CCAGATCGACTCGTTCACGGCCTCCGTGGGCTGGCAGTTCTAA

Upstream 100 bases:

>100_bases
CGAGACGGCAGGACGCCACGACATTCGGCAGTCTTCCGCCGCCCTTTCGGGACGGCATGCGAGGGCCTGGTGCAATGTTC
CAGAATTCAAGGAGAGTTTC

Downstream 100 bases:

>100_bases
GAAGCCCCCCAGGGTTTCTCGCAGCGATCGAACGCTGGGCAACGTCCCGGCGTTTGTCTTTTTACTAGCGGTCATTCCCC
CAAGGCAGCACTGGCCTGCC

Product: OmpA-like transmembrane region

Products: NA

Alternate protein names: OmpA-Like Transmembrane Region; NB-Dependent Receptor Protein

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTIKTLLAASVATSTLFVFTPNAMAAPNPEGLYFGVGTGFSSLENDDDDIDDFIESGSEDFDVDDDDNTFKGFVGYNFNR
YFATEAFYSDLGRVKLKGNGTANTDLESEAYGVSLVGKLPITQWFELFAKAGMAKWETDIDGNLGGASTDLEDNDGVDPV
YGAGAQFNFKPFLVRAEYERYDFDSDYQIDSFTASVGWQF

Sequences:

>Translated_200_residues
MTIKTLLAASVATSTLFVFTPNAMAAPNPEGLYFGVGTGFSSLENDDDDIDDFIESGSEDFDVDDDDNTFKGFVGYNFNR
YFATEAFYSDLGRVKLKGNGTANTDLESEAYGVSLVGKLPITQWFELFAKAGMAKWETDIDGNLGGASTDLEDNDGVDPV
YGAGAQFNFKPFLVRAEYERYDFDSDYQIDSFTASVGWQF
>Mature_199_residues
TIKTLLAASVATSTLFVFTPNAMAAPNPEGLYFGVGTGFSSLENDDDDIDDFIESGSEDFDVDDDDNTFKGFVGYNFNRY
FATEAFYSDLGRVKLKGNGTANTDLESEAYGVSLVGKLPITQWFELFAKAGMAKWETDIDGNLGGASTDLEDNDGVDPVY
GAGAQFNFKPFLVRAEYERYDFDSDYQIDSFTASVGWQF

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21968; Mature: 21837

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKTLLAASVATSTLFVFTPNAMAAPNPEGLYFGVGTGFSSLENDDDDIDDFIESGSED
CCHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCC
FDVDDDDNTFKGFVGYNFNRYFATEAFYSDLGRVKLKGNGTANTDLESEAYGVSLVGKLP
CCCCCCCCCEEEEECCCCCCEEEHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCC
ITQWFELFAKAGMAKWETDIDGNLGGASTDLEDNDGVDPVYGAGAQFNFKPFLVRAEYER
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHH
YDFDSDYQIDSFTASVGWQF
CCCCCCCEECEEEECCCCCC
>Mature Secondary Structure 
TIKTLLAASVATSTLFVFTPNAMAAPNPEGLYFGVGTGFSSLENDDDDIDDFIESGSED
CHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCC
FDVDDDDNTFKGFVGYNFNRYFATEAFYSDLGRVKLKGNGTANTDLESEAYGVSLVGKLP
CCCCCCCCCEEEEECCCCCCEEEHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCC
ITQWFELFAKAGMAKWETDIDGNLGGASTDLEDNDGVDPVYGAGAQFNFKPFLVRAEYER
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHH
YDFDSDYQIDSFTASVGWQF
CCCCCCCEECEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA