| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is acnB [H]
Identifier: 161897780
GI number: 161897780
Start: 2324364
End: 2326967
Strand: Direct
Name: acnB [H]
Synonym: Csal_2058
Alternate gene names: 161897780
Gene position: 2324364-2326967 (Clockwise)
Preceding gene: 92114176
Following gene: 92114181
Centisome position: 62.88
GC content: 66.47
Gene sequence:
>2604_bases GTGCTTGAAGCCTATCGCCAACATGTCGAGGAGCGCGCCCAGGCGGGCGTTCCGCCAAAGCCGCTGAACGCCGAGCAGAC GGCTGCCCTGGTCAAGCTGCTCAAGAATCCGCCCGCCGGCGAGGAAGAGGCCATTCTCGACCTGCTGACCAACCGCGTGC CGCCGGGCGTCGACGAGGCCGCCTACGTCAAGGCCGGCTTCCTGACCGCCATCGCCAAGGGCGAGGCCGAGTCCCCGCTG ATCGACCGCGTCCACGCCGTCAAGCTGCTGGGCACCATGCAGGGCGGTTACAACATCGTCTCGCTGGTCGAGCTGCTGGA TGACGACGACCTGGCCCGCGAAGTCGGCGAGCAGCTCAAGCACACCCTGCTGATGTTCGATGCCTTCCATGACGTGGAAG AGCGTGCCAAGGCCGGTAACGCCGTGGCCAAGGAGGTCATCGCGTCCTGGGCCGAGGCCGAGTGGTTCCTCGCAAAGCCC AAGCTGGCCGACAAGATCACCCTGACCGTGTTCAAGGTGCCCGGCGAGACCAACACCGATGACCTCTCCCCGGCCCCGGA TGCCTGGTCGCGCCCGGACATCCCGCTGCATGCCAATGCCATGCTCAAGAACCCGCGCGACGGCATCGAGCCGGTCGAAC CGGGCGTCACCGGTCCGCTCAAGCAGATCGAGGAAGTGAAAGCCAAGGGCCACCCGGTCGTCTACGTCGGCGACGTGGTC GGCACCGGCTCCTCGCGCAAGTCCGCCACCAACTCCGTGCTGTGGTTCTTCGGCGACGACATCCCCAATGTGCCGAACAA GCGCGCCGGCGGCTTCTGCTTCGGCGGCAAGATCGCCCCGATCTTCTTCAATACCATGGAAGACTCCGGCGCCCTGCCCA TCGAGATGGACGTCGAGAAGCTCGAGATGGGCGACGTCATCGACGTCTACCCGTATGAAGGCAAGGTCTGCAAGCACGGC ACCGACGAGGTGCTGACCACCTTCGAGCTCAAGACCCAGCTGCTGCTCGACGAAGCCCGTGCCGGCGGCCGCATCCCGCT GATCATCGGCCGCGGCCTGACCGCCAAGGCCCGCGAGTCCCTGGGCCTGGCCCCATCCGACGTCTTCCGCCTGCCGGAGC AGCCGGCCGATACCGGTCGCGGCTTCACCCTGGCCCAGAAGATGGTCGGCAAGGCCTGCGGCATGGACGGCGTGCGTCCC GGCATGTACTGCGAGCCGAAGATGACCACCGTGGGTTCCCAGGACACCACCGGTCCGATGACCCGCGACGAGCTCAAGGA CCTGGCCTGCCTGGGCTTCCAGGCCGACCTGGTGATGCAGTCCTTCTGCCACACCAGCGCCTATCCCAAGCCGGTCGACG TGGAGACCCACCACACCCTGCCCGACTTCATCATGAATCGCGGCGGCGTCTCGCTGCGTCCGGGCGACGGCATCATCCAC AGCTGGCTCAACCGCATGCTGCTGCCCGACACCGTGGGTACCGGCGGCGACTCCCACACCCGTTTCCCGATGGGCATCTC CTTCCCGGCGGGCTCCGGCCTGGTGGCCTTCGCCGCCGCCACCGGCGTGATGCCGCTGGACATGCCGGAATCGGTGCTGG TGCGCTTCAAGGGCAAGCGTCAGCCCGGCGTCACCCTGCGTGACCTGGTCCACGCCATCCCCTACTACGCCATCCAGCAG GGCCTGCTGACCGTCGAGAAGTCCGGCAAGAAGAACGCCTTCTCCGGCCGCGTGCTGGAGATCGAGGGCCTCGAGGACCT CACCGTCGAGCAGGCCTTCGAACTCTCCGACGCCTCCGCCGAGCGCAGCGCCGCCGGCTGCACCATCACCCTCTCCGAGG ACAGTGTCAGCGAGTACCTGAAGTCCAACATCACCTTGCTCAAGTGGATGATCGCCAACGGCTACGGCGACGCGCGCACC ATCGAGCGCCGCATCAAGGGCATGGAAGAATGGCTCGAGAACCCGAGCCTGATGCGCGCCGACAAGGACGCCGAGTACGC CGAGGTCATCGAGATCGATCTCGACCAGCTCAGCGAGCCGGTGCTGTGCGCCCCGAACGACCCGGACGACGCCCGCCTGC TCTCCGAGGTGGCCGGCCAGAGCATCGACGAGGTGTTCATCGGCTCGTGCATGACCAACATCGGCCACTTCCGTGCCGCC GGCAAGCTGCTCGAGAAGCAGCCCGCGGGCAGCCTGAAGACCAAGCTGTGGCTGGCGCCGCCGACCAAGATGGACCAGCA CCAGCTCACCGAGGAAGGCTACTACGGCATCTACGGCCGTGCCGGTGCGCGCATGGAAATGCCCGGCTGCTCGCTGTGCA TGGGTAACCAGGCCCGCGTCGCCGCCAAGAGCACCGTGGTGTCCACCTCCACGCGCAACTTCCCCAACCGTCTGGGCGAT GGCGCCGATGTCTTCCTGGCCTCCGCCGAGCTTGCCGCCGTGGCCGCGGTGGAAGGACGCCTGCCGAGCGTCGACGAATA TCGCCGTTACATGAGCGAATTCGACGCCATGGCCGGCGAGATCTATCGTTACATGAACTTCCATGAAATCGAAGAGTTCC AGAACGCGGCCTCGAACGTGATTCCGGTCGCCGAGGAAGCCTGA
Upstream 100 bases:
>100_bases GGTGAAACCTGCACCAGGTCGGTGGGGAGGCGGTGACGGCCGAGCGCCTGCCCATGACTCGCCGCCGCCCTGGTTTCGAT GACTGATGAGGGTCCCCAAC
Downstream 100 bases:
>100_bases CCACTCGTCTCCAATGCTCGCCTGTTGAGAAAGAGTGCAGGTCACCGAAACGCCCCGCCGATGCGGGGCGTTTTTTTGAG CCTGTCGCCATCCGGCAACG
Product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Products: NA
Alternate protein names: Aconitase 2; 2-methylisocitrate dehydratase; Citrate hydro-lyase 2 [H]
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MLEAYRQHVEERAQAGVPPKPLNAEQTAALVKLLKNPPAGEEEAILDLLTNRVPPGVDEAAYVKAGFLTAIAKGEAESPL IDRVHAVKLLGTMQGGYNIVSLVELLDDDDLAREVGEQLKHTLLMFDAFHDVEERAKAGNAVAKEVIASWAEAEWFLAKP KLADKITLTVFKVPGETNTDDLSPAPDAWSRPDIPLHANAMLKNPRDGIEPVEPGVTGPLKQIEEVKAKGHPVVYVGDVV GTGSSRKSATNSVLWFFGDDIPNVPNKRAGGFCFGGKIAPIFFNTMEDSGALPIEMDVEKLEMGDVIDVYPYEGKVCKHG TDEVLTTFELKTQLLLDEARAGGRIPLIIGRGLTAKARESLGLAPSDVFRLPEQPADTGRGFTLAQKMVGKACGMDGVRP GMYCEPKMTTVGSQDTTGPMTRDELKDLACLGFQADLVMQSFCHTSAYPKPVDVETHHTLPDFIMNRGGVSLRPGDGIIH SWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKRQPGVTLRDLVHAIPYYAIQQ GLLTVEKSGKKNAFSGRVLEIEGLEDLTVEQAFELSDASAERSAAGCTITLSEDSVSEYLKSNITLLKWMIANGYGDART IERRIKGMEEWLENPSLMRADKDAEYAEVIEIDLDQLSEPVLCAPNDPDDARLLSEVAGQSIDEVFIGSCMTNIGHFRAA GKLLEKQPAGSLKTKLWLAPPTKMDQHQLTEEGYYGIYGRAGARMEMPGCSLCMGNQARVAAKSTVVSTSTRNFPNRLGD GADVFLASAELAAVAAVEGRLPSVDEYRRYMSEFDAMAGEIYRYMNFHEIEEFQNAASNVIPVAEEA
Sequences:
>Translated_867_residues MLEAYRQHVEERAQAGVPPKPLNAEQTAALVKLLKNPPAGEEEAILDLLTNRVPPGVDEAAYVKAGFLTAIAKGEAESPL IDRVHAVKLLGTMQGGYNIVSLVELLDDDDLAREVGEQLKHTLLMFDAFHDVEERAKAGNAVAKEVIASWAEAEWFLAKP KLADKITLTVFKVPGETNTDDLSPAPDAWSRPDIPLHANAMLKNPRDGIEPVEPGVTGPLKQIEEVKAKGHPVVYVGDVV GTGSSRKSATNSVLWFFGDDIPNVPNKRAGGFCFGGKIAPIFFNTMEDSGALPIEMDVEKLEMGDVIDVYPYEGKVCKHG TDEVLTTFELKTQLLLDEARAGGRIPLIIGRGLTAKARESLGLAPSDVFRLPEQPADTGRGFTLAQKMVGKACGMDGVRP GMYCEPKMTTVGSQDTTGPMTRDELKDLACLGFQADLVMQSFCHTSAYPKPVDVETHHTLPDFIMNRGGVSLRPGDGIIH SWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKRQPGVTLRDLVHAIPYYAIQQ GLLTVEKSGKKNAFSGRVLEIEGLEDLTVEQAFELSDASAERSAAGCTITLSEDSVSEYLKSNITLLKWMIANGYGDART IERRIKGMEEWLENPSLMRADKDAEYAEVIEIDLDQLSEPVLCAPNDPDDARLLSEVAGQSIDEVFIGSCMTNIGHFRAA GKLLEKQPAGSLKTKLWLAPPTKMDQHQLTEEGYYGIYGRAGARMEMPGCSLCMGNQARVAAKSTVVSTSTRNFPNRLGD GADVFLASAELAAVAAVEGRLPSVDEYRRYMSEFDAMAGEIYRYMNFHEIEEFQNAASNVIPVAEEA >Mature_867_residues MLEAYRQHVEERAQAGVPPKPLNAEQTAALVKLLKNPPAGEEEAILDLLTNRVPPGVDEAAYVKAGFLTAIAKGEAESPL IDRVHAVKLLGTMQGGYNIVSLVELLDDDDLAREVGEQLKHTLLMFDAFHDVEERAKAGNAVAKEVIASWAEAEWFLAKP KLADKITLTVFKVPGETNTDDLSPAPDAWSRPDIPLHANAMLKNPRDGIEPVEPGVTGPLKQIEEVKAKGHPVVYVGDVV GTGSSRKSATNSVLWFFGDDIPNVPNKRAGGFCFGGKIAPIFFNTMEDSGALPIEMDVEKLEMGDVIDVYPYEGKVCKHG TDEVLTTFELKTQLLLDEARAGGRIPLIIGRGLTAKARESLGLAPSDVFRLPEQPADTGRGFTLAQKMVGKACGMDGVRP GMYCEPKMTTVGSQDTTGPMTRDELKDLACLGFQADLVMQSFCHTSAYPKPVDVETHHTLPDFIMNRGGVSLRPGDGIIH SWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKRQPGVTLRDLVHAIPYYAIQQ GLLTVEKSGKKNAFSGRVLEIEGLEDLTVEQAFELSDASAERSAAGCTITLSEDSVSEYLKSNITLLKWMIANGYGDART IERRIKGMEEWLENPSLMRADKDAEYAEVIEIDLDQLSEPVLCAPNDPDDARLLSEVAGQSIDEVFIGSCMTNIGHFRAA GKLLEKQPAGSLKTKLWLAPPTKMDQHQLTEEGYYGIYGRAGARMEMPGCSLCMGNQARVAAKSTVVSTSTRNFPNRLGD GADVFLASAELAAVAAVEGRLPSVDEYRRYMSEFDAMAGEIYRYMNFHEIEEFQNAASNVIPVAEEA
Specific function: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate as well as the dehydration of 2-methylisocitrate to cis-2-methylaconitate [H]
COG id: COG1049
COG function: function code C; Aconitase B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aconitase/IPM isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367097, Length=861, Percent_Identity=76.0743321718931, Blast_Score=1334, Evalue=0.0, Organism=Escherichia coli, GI1786259, Length=398, Percent_Identity=25.3768844221106, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6323335, Length=384, Percent_Identity=26.5625, Blast_Score=78, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6322261, Length=399, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015931 - InterPro: IPR015937 - InterPro: IPR001030 - InterPro: IPR015928 - InterPro: IPR015932 - InterPro: IPR018136 - InterPro: IPR004406 - InterPro: IPR015930 - InterPro: IPR015933 - InterPro: IPR015929 [H]
Pfam domain/function: PF00330 Aconitase; PF06434 Aconitase_2_N; PF11791 Aconitase_B_N [H]
EC number: =4.2.1.3; =4.2.1.99 [H]
Molecular weight: Translated: 94103; Mature: 94103
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00450 ACONITASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAYRQHVEERAQAGVPPKPLNAEQTAALVKLLKNPPAGEEEAILDLLTNRVPPGVDEA CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCH AYVKAGFLTAIAKGEAESPLIDRVHAVKLLGTMQGGYNIVSLVELLDDDDLAREVGEQLK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH HTLLMFDAFHDVEERAKAGNAVAKEVIASWAEAEWFLAKPKLADKITLTVFKVPGETNTD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCC DLSPAPDAWSRPDIPLHANAMLKNPRDGIEPVEPGVTGPLKQIEEVKAKGHPVVYVGDVV CCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEE GTGSSRKSATNSVLWFFGDDIPNVPNKRAGGFCFGGKIAPIFFNTMEDSGALPIEMDVEK CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCEEECHHH LEMGDVIDVYPYEGKVCKHGTDEVLTTFELKTQLLLDEARAGGRIPLIIGRGLTAKARES HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH LGLAPSDVFRLPEQPADTGRGFTLAQKMVGKACGMDGVRPGMYCEPKMTTVGSQDTTGPM CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCC TRDELKDLACLGFQADLVMQSFCHTSAYPKPVDVETHHTLPDFIMNRGGVSLRPGDGIIH CHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCEECCCCCHHH SWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKR HHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCEEHHHHCCCCCCCCCHHHHHEECCCC QPGVTLRDLVHAIPYYAIQQGLLTVEKSGKKNAFSGRVLEIEGLEDLTVEQAFELSDASA CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCC ERSAAGCTITLSEDSVSEYLKSNITLLKWMIANGYGDARTIERRIKGMEEWLENPSLMRA HHCCCCEEEEECCHHHHHHHHCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEC DKDAEYAEVIEIDLDQLSEPVLCAPNDPDDARLLSEVAGQSIDEVFIGSCMTNIGHFRAA CCCCCHHHHHEEEHHHCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GKLLEKQPAGSLKTKLWLAPPTKMDQHQLTEEGYYGIYGRAGARMEMPGCSLCMGNQARV HHHHHCCCCCCCCEEEEECCCCCCHHHHHHCCCCEEEEECCCCEECCCCCCEEECCCCCC AAKSTVVSTSTRNFPNRLGDGADVFLASAELAAVAAVEGRLPSVDEYRRYMSEFDAMAGE HHHHHEEECCCCCCHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH IYRYMNFHEIEEFQNAASNVIPVAEEA HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLEAYRQHVEERAQAGVPPKPLNAEQTAALVKLLKNPPAGEEEAILDLLTNRVPPGVDEA CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCH AYVKAGFLTAIAKGEAESPLIDRVHAVKLLGTMQGGYNIVSLVELLDDDDLAREVGEQLK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH HTLLMFDAFHDVEERAKAGNAVAKEVIASWAEAEWFLAKPKLADKITLTVFKVPGETNTD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCC DLSPAPDAWSRPDIPLHANAMLKNPRDGIEPVEPGVTGPLKQIEEVKAKGHPVVYVGDVV CCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEE GTGSSRKSATNSVLWFFGDDIPNVPNKRAGGFCFGGKIAPIFFNTMEDSGALPIEMDVEK CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCEEECHHH LEMGDVIDVYPYEGKVCKHGTDEVLTTFELKTQLLLDEARAGGRIPLIIGRGLTAKARES HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH LGLAPSDVFRLPEQPADTGRGFTLAQKMVGKACGMDGVRPGMYCEPKMTTVGSQDTTGPM CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCC TRDELKDLACLGFQADLVMQSFCHTSAYPKPVDVETHHTLPDFIMNRGGVSLRPGDGIIH CHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCEECCCCCHHH SWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKR HHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCEEHHHHCCCCCCCCCHHHHHEECCCC QPGVTLRDLVHAIPYYAIQQGLLTVEKSGKKNAFSGRVLEIEGLEDLTVEQAFELSDASA CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCC ERSAAGCTITLSEDSVSEYLKSNITLLKWMIANGYGDARTIERRIKGMEEWLENPSLMRA HHCCCCEEEEECCHHHHHHHHCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEC DKDAEYAEVIEIDLDQLSEPVLCAPNDPDDARLLSEVAGQSIDEVFIGSCMTNIGHFRAA CCCCCHHHHHEEEHHHCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GKLLEKQPAGSLKTKLWLAPPTKMDQHQLTEEGYYGIYGRAGARMEMPGCSLCMGNQARV HHHHHCCCCCCCCEEEEECCCCCCHHHHHHCCCCEEEEECCCCEECCCCCCEEECCCCCC AAKSTVVSTSTRNFPNRLGDGADVFLASAELAAVAAVEGRLPSVDEYRRYMSEFDAMAGE HHHHHEEECCCCCCHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH IYRYMNFHEIEEFQNAASNVIPVAEEA HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]