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The map label for this gene is ndh [H]

Identifier: 92114076

GI number: 92114076

Start: 2209830

End: 2210930

Strand: Direct

Name: ndh [H]

Synonym: Csal_1953

Alternate gene names: 92114076

Gene position: 2209830-2210930 (Clockwise)

Preceding gene: 92114075

Following gene: 92114078

Centisome position: 59.78

GC content: 69.03

Gene sequence:

>1101_bases
ATGACGACGCGCCTCGTACTGGTAGGTGCCGGCCACGCGCACCTGCATTTGCTGCAACACGCCGACACGCTTCGTCGTGC
CGGCTATCGCATCACACTCGTCGCCCCCAGCCGCTTCTGGTATTCCGGCATGGCCGCGCGGCTGTTGAGCGGCGCGCCAC
GCACAGAGTGCAGCCTGGATATCGCCTCGCTCAGCGTGCGTCACGCCGTCGAACACGTCACCGCCCCCTTCGCTGCCCTG
GAGGTGGACTCCCGCCATGTCCTGCTGGCCGACGGCAACAACCTGGCATTCGACGTACTGTCGCTGAATGTCGGCAGCGA
CGTCATGCCGCCCACCGCGGGCGGCGCCACGGTCGCGGCCTGGGGGGCGGCCCGCTATTGGCACGTCAAGCCCATCGAGC
GCCTCGATGCCTTGCGCCAGCACGTGCACGACGCGGCACAACGCCACCAGTCGCTGCACATGGTCGTGGTCGGCGGCGGC
CCCTCGGGCGTGGAAATGGCCGCCAATCTGGCGGGACTGAGCCGCCGCCTGGGCGTGCCCAACGACGTTCGCCTGGTCAC
ACGCCACGCGCGCTTGCTGCCCGCCGCCCCGGAGGCCGCTGCCCGATGGGCCAGCCGCCAGCTCGCTCGGCTGGGCGTCG
AGTGGCGGGGCAATCTGGCACTGGATGCCGGCGCGGCATGGCTCGACGCCTTGCCCGCCGCCGCGGATGACATCGTCCTC
GCCACGGGGCTGCGGCCTGCATACTGCGTCGCCGACCTGCCGCTGGATCTGGACGACAACGGCATTCGCATCCGAACGAC
CCTGCAAAGCGAGAGCCATGACGAGATTTTCGCCGTCGGCGATTGCGCCTCGCTGATCGAGCACGCCTTGCCCAAGCGCG
GTGTCGAGGGCGTGCGACAAGGTCCCGTGCTGCTGGATAACCTGGTCGCGCTGCAACGCGGGAAGCCCCTGCGCGATTAC
CGTCCGCCCGGGACCGCGCTGTCGATCGTGGATCTCCACGATACGGGACTCGCGCTATACGGCACGCACTGGTGGGGAGG
TCGGGGAGCCCTGCGGCTCAAGCGATACATCGACACGCGCTTCTTGAAGCGCTACCGATGA

Upstream 100 bases:

>100_bases
CTGCCTGGCACGGCAGACGCGGCACGACATGAGGGAAGTGAAAGCGTAGCGGGGCGATCATCGACTAGAGTGAGTCCAGG
TCCCAAGGAAACCCGTTTTG

Downstream 100 bases:

>100_bases
GGCATGGGCGAGACGAAGGACGCCGCGGATCGCGGCGAGCGGCGGGAAGGCTGGAAGGACGACGCCGGCGGGAAGGAAAG
AACCGCCGCCATCACACCTG

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTTRLVLVGAGHAHLHLLQHADTLRRAGYRITLVAPSRFWYSGMAARLLSGAPRTECSLDIASLSVRHAVEHVTAPFAAL
EVDSRHVLLADGNNLAFDVLSLNVGSDVMPPTAGGATVAAWGAARYWHVKPIERLDALRQHVHDAAQRHQSLHMVVVGGG
PSGVEMAANLAGLSRRLGVPNDVRLVTRHARLLPAAPEAAARWASRQLARLGVEWRGNLALDAGAAWLDALPAAADDIVL
ATGLRPAYCVADLPLDLDDNGIRIRTTLQSESHDEIFAVGDCASLIEHALPKRGVEGVRQGPVLLDNLVALQRGKPLRDY
RPPGTALSIVDLHDTGLALYGTHWWGGRGALRLKRYIDTRFLKRYR

Sequences:

>Translated_366_residues
MTTRLVLVGAGHAHLHLLQHADTLRRAGYRITLVAPSRFWYSGMAARLLSGAPRTECSLDIASLSVRHAVEHVTAPFAAL
EVDSRHVLLADGNNLAFDVLSLNVGSDVMPPTAGGATVAAWGAARYWHVKPIERLDALRQHVHDAAQRHQSLHMVVVGGG
PSGVEMAANLAGLSRRLGVPNDVRLVTRHARLLPAAPEAAARWASRQLARLGVEWRGNLALDAGAAWLDALPAAADDIVL
ATGLRPAYCVADLPLDLDDNGIRIRTTLQSESHDEIFAVGDCASLIEHALPKRGVEGVRQGPVLLDNLVALQRGKPLRDY
RPPGTALSIVDLHDTGLALYGTHWWGGRGALRLKRYIDTRFLKRYR
>Mature_365_residues
TTRLVLVGAGHAHLHLLQHADTLRRAGYRITLVAPSRFWYSGMAARLLSGAPRTECSLDIASLSVRHAVEHVTAPFAALE
VDSRHVLLADGNNLAFDVLSLNVGSDVMPPTAGGATVAAWGAARYWHVKPIERLDALRQHVHDAAQRHQSLHMVVVGGGP
SGVEMAANLAGLSRRLGVPNDVRLVTRHARLLPAAPEAAARWASRQLARLGVEWRGNLALDAGAAWLDALPAAADDIVLA
TGLRPAYCVADLPLDLDDNGIRIRTTLQSESHDEIFAVGDCASLIEHALPKRGVEGVRQGPVLLDNLVALQRGKPLRDYR
PPGTALSIVDLHDTGLALYGTHWWGGRGALRLKRYIDTRFLKRYR

Specific function: Transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Does not couple the redox reaction to proton translocation [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cell membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1787352, Length=280, Percent_Identity=26.4285714285714, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.6.99.3 [H]

Molecular weight: Translated: 39659; Mature: 39528

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRLVLVGAGHAHLHLLQHADTLRRAGYRITLVAPSRFWYSGMAARLLSGAPRTECSLD
CCEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEE
IASLSVRHAVEHVTAPFAALEVDSRHVLLADGNNLAFDVLSLNVGSDVMPPTAGGATVAA
HHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEE
WGAARYWHVKPIERLDALRQHVHDAAQRHQSLHMVVVGGGPSGVEMAANLAGLSRRLGVP
CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCC
NDVRLVTRHARLLPAAPEAAARWASRQLARLGVEWRGNLALDAGAAWLDALPAAADDIVL
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCEEE
ATGLRPAYCVADLPLDLDDNGIRIRTTLQSESHDEIFAVGDCASLIEHALPKRGVEGVRQ
ECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHCCCCCCCHHHC
GPVLLDNLVALQRGKPLRDYRPPGTALSIVDLHDTGLALYGTHWWGGRGALRLKRYIDTR
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHH
FLKRYR
HHHHCC
>Mature Secondary Structure 
TTRLVLVGAGHAHLHLLQHADTLRRAGYRITLVAPSRFWYSGMAARLLSGAPRTECSLD
CEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEE
IASLSVRHAVEHVTAPFAALEVDSRHVLLADGNNLAFDVLSLNVGSDVMPPTAGGATVAA
HHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEE
WGAARYWHVKPIERLDALRQHVHDAAQRHQSLHMVVVGGGPSGVEMAANLAGLSRRLGVP
CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCC
NDVRLVTRHARLLPAAPEAAARWASRQLARLGVEWRGNLALDAGAAWLDALPAAADDIVL
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCEEE
ATGLRPAYCVADLPLDLDDNGIRIRTTLQSESHDEIFAVGDCASLIEHALPKRGVEGVRQ
ECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHCCCCCCCHHHC
GPVLLDNLVALQRGKPLRDYRPPGTALSIVDLHDTGLALYGTHWWGGRGALRLKRYIDTR
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHH
FLKRYR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6265208; 8905232; 9278503 [H]