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The map label for this gene is fliF [H]

Identifier: 92114078

GI number: 92114078

Start: 2211627

End: 2213411

Strand: Direct

Name: fliF [H]

Synonym: Csal_1955

Alternate gene names: 92114078

Gene position: 2211627-2213411 (Clockwise)

Preceding gene: 92114076

Following gene: 92114079

Centisome position: 59.83

GC content: 67.39

Gene sequence:

>1785_bases
ATGAGCACAGCAGCATCCTCCTCGACCGAGGCCAATCAAGGTACGTCCGGACAGCGTCAGGGCAACGCCGCCGCACCGTC
GCTCGTCGACCGGTTGCGCGGCAACCCGCGTGTCCCGCTGATCATCGCCGCCGCGGCGAGCGTGGCGATCATCGCCGCCC
TGCTGATGTGGGCGCGCGCCCCCGAATACCGCGTCCTCTATTCCACGCTCACCGACGCCGATGGCGGCAAGATCGTCTCC
GAGCTCGACAGCATGGGCGTGCCCTACGAGTTCAGCGAGAACGGGCAGGCGCTTCTGGTGCCCGCCGATCAGGTGAACAA
GCTGCGTCTCCAGCTCGCCGAGCAGGGCCTGCCGGAAGCCTCCGGTGTCGGCTATGAACTGATGGACGAGCAATCCTTCG
GCATCAGCCAGTTCACCGAACACGTCAACTACCAGCGCGCCCTCGAGGGCGAGCTCGCGCGCACCATCGAGGACCTGGGC
CCCGTCTCCAAGGCCCGCGTCCATCTCGCCATGGCCAAGCCCTCGGTCTTCGTGCGCGAAAGCGAACCGGCCAGCGCCTC
GGTGATGCTCGACCTGCAGCGCGGCCGTGTCCTCGGCGAAGGCCAGGTACAGGCCATCATGCACATGGTCTCGAGCAGCG
TCTCCGAGCTGGCCATCAGCGACGTCGCCGTGGTCGACCAGACGGGACGTCTGCTGTCCCCCGCCAGCGATGGTAACGAG
GCGCTCAATGGCTCGCAGCTCGACTACGTCGCCCGCGTCGAGCGCAACTATGCAGAACGCATCGAGTCGATCCTCGCCCC
CATTCTCGGGGCGCGCAACGTCAAGGCCGAGGTGTCCGCGCAACTGGATTTCTCCGAGCGCGAAGGCACCAGTGAAACGT
ACGGCCCCAATCAGCCGCCCAACGAAGCCGCGGTACGCAGCGAGCAGACGAGCCTCAGCTACAGCGGCGACGGTGACCTC
GCCATGGGCATCCCCGGCGCGCTGAGCAACCAGCCACCGGGGACGGCCGCCTCGCCCATCAACGCCCCCCAGGAGGACGA
CGCGGGCGACGGCGAAGGCGAAGACGCACAAGACGACGGCAACCAGGACGAAGACGGCGAAGCCACGACCCAGGAAAACG
CGACCCTGGGGCGGACCAGCCGCGATAACACCATCAATTACGAGGTCGACCGTACCGTCGAGCACATTCAGCACGAGACC
GGCACCATCGAGCGCCTCAATGCCGCCATCGTGGTCAATTACCGTGACGGCGTGGACGAGGACGGCAACCCGACGCGGGT
CCCGCTGAGCGACCAGGAAATCGCCAATATCCGCAGTCTCGCCCAGCAGGCCATCGGCTTCTCGCAGGCGCGCGGCGACC
AGCTCGAAGTCGTCAACTCTCCCTTCGACGACACGTCCGAGCAGCGCCCCGAGCCCGCATGGTGGGAGTCTCCCCTGCTC
TGGTCGCTGGCGACCACGCTGGGGCAATACCTGCTGATCGGTCTCGTCGCCCTGTTCCTGTGGTTCAAGGTGCTGCGTCC
GCTGATTCAACGCCAGACCGAGCGCCCCGCCTTCACGCCGGCCACGGCCGCGCCGGCGGGGGCCGCCGGGGGCGCCGAGG
CCTACGCCGCCACCGCGGCCGAGGGCACCGGTGCCGAGGAAGAACCGCCGGCACCGCCACAGAAGCGCCGCGAGCGCCGC
TCGGCCAGTTATGAACAAAACCTCCGTGACGTACGCGAGATTGCCCAGGAAGACCCGCGTCTCGTCGCCATGATCGTCAG
AGGCTGGATGAGTTCCCATGAGTAA

Upstream 100 bases:

>100_bases
TGACGAGACGCCAAACGATGCGCAGAATTCTGGAGTTGGACACCCCCATGCTTGCCGCTGGAACGTTTCCGTGCCTACCC
CGGCGCTGCCGGAGGATGAC

Downstream 100 bases:

>100_bases
GATGAGTGGCGCCCGCCGTAGCGCAATTCTGCTGCTCTCGCTGGACGAGGACAGCGCCGCCGAGGTGTTCAAGTACCTCA
GCAACAAGGAGGTCCAGGAA

Product: flagellar M-ring protein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MSTAASSSTEANQGTSGQRQGNAAAPSLVDRLRGNPRVPLIIAAAASVAIIAALLMWARAPEYRVLYSTLTDADGGKIVS
ELDSMGVPYEFSENGQALLVPADQVNKLRLQLAEQGLPEASGVGYELMDEQSFGISQFTEHVNYQRALEGELARTIEDLG
PVSKARVHLAMAKPSVFVRESEPASASVMLDLQRGRVLGEGQVQAIMHMVSSSVSELAISDVAVVDQTGRLLSPASDGNE
ALNGSQLDYVARVERNYAERIESILAPILGARNVKAEVSAQLDFSEREGTSETYGPNQPPNEAAVRSEQTSLSYSGDGDL
AMGIPGALSNQPPGTAASPINAPQEDDAGDGEGEDAQDDGNQDEDGEATTQENATLGRTSRDNTINYEVDRTVEHIQHET
GTIERLNAAIVVNYRDGVDEDGNPTRVPLSDQEIANIRSLAQQAIGFSQARGDQLEVVNSPFDDTSEQRPEPAWWESPLL
WSLATTLGQYLLIGLVALFLWFKVLRPLIQRQTERPAFTPATAAPAGAAGGAEAYAATAAEGTGAEEEPPAPPQKRRERR
SASYEQNLRDVREIAQEDPRLVAMIVRGWMSSHE

Sequences:

>Translated_594_residues
MSTAASSSTEANQGTSGQRQGNAAAPSLVDRLRGNPRVPLIIAAAASVAIIAALLMWARAPEYRVLYSTLTDADGGKIVS
ELDSMGVPYEFSENGQALLVPADQVNKLRLQLAEQGLPEASGVGYELMDEQSFGISQFTEHVNYQRALEGELARTIEDLG
PVSKARVHLAMAKPSVFVRESEPASASVMLDLQRGRVLGEGQVQAIMHMVSSSVSELAISDVAVVDQTGRLLSPASDGNE
ALNGSQLDYVARVERNYAERIESILAPILGARNVKAEVSAQLDFSEREGTSETYGPNQPPNEAAVRSEQTSLSYSGDGDL
AMGIPGALSNQPPGTAASPINAPQEDDAGDGEGEDAQDDGNQDEDGEATTQENATLGRTSRDNTINYEVDRTVEHIQHET
GTIERLNAAIVVNYRDGVDEDGNPTRVPLSDQEIANIRSLAQQAIGFSQARGDQLEVVNSPFDDTSEQRPEPAWWESPLL
WSLATTLGQYLLIGLVALFLWFKVLRPLIQRQTERPAFTPATAAPAGAAGGAEAYAATAAEGTGAEEEPPAPPQKRRERR
SASYEQNLRDVREIAQEDPRLVAMIVRGWMSSHE
>Mature_593_residues
STAASSSTEANQGTSGQRQGNAAAPSLVDRLRGNPRVPLIIAAAASVAIIAALLMWARAPEYRVLYSTLTDADGGKIVSE
LDSMGVPYEFSENGQALLVPADQVNKLRLQLAEQGLPEASGVGYELMDEQSFGISQFTEHVNYQRALEGELARTIEDLGP
VSKARVHLAMAKPSVFVRESEPASASVMLDLQRGRVLGEGQVQAIMHMVSSSVSELAISDVAVVDQTGRLLSPASDGNEA
LNGSQLDYVARVERNYAERIESILAPILGARNVKAEVSAQLDFSEREGTSETYGPNQPPNEAAVRSEQTSLSYSGDGDLA
MGIPGALSNQPPGTAASPINAPQEDDAGDGEGEDAQDDGNQDEDGEATTQENATLGRTSRDNTINYEVDRTVEHIQHETG
TIERLNAAIVVNYRDGVDEDGNPTRVPLSDQEIANIRSLAQQAIGFSQARGDQLEVVNSPFDDTSEQRPEPAWWESPLLW
SLATTLGQYLLIGLVALFLWFKVLRPLIQRQTERPAFTPATAAPAGAAGGAEAYAATAAEGTGAEEEPPAPPQKRRERRS
ASYEQNLRDVREIAQEDPRLVAMIVRGWMSSHE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=567, Percent_Identity=44.2680776014109, Blast_Score=440, Evalue=1e-124,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 63786; Mature: 63655

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAASSSTEANQGTSGQRQGNAAAPSLVDRLRGNPRVPLIIAAAASVAIIAALLMWARA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCC
PEYRVLYSTLTDADGGKIVSELDSMGVPYEFSENGQALLVPADQVNKLRLQLAEQGLPEA
CCCEEEHHHHCCCCCCHHHHHHHHCCCCEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCC
SGVGYELMDEQSFGISQFTEHVNYQRALEGELARTIEDLGPVSKARVHLAMAKPSVFVRE
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCCEEEEC
SEPASASVMLDLQRGRVLGEGQVQAIMHMVSSSVSELAISDVAVVDQTGRLLSPASDGNE
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCH
ALNGSQLDYVARVERNYAERIESILAPILGARNVKAEVSAQLDFSEREGTSETYGPNQPP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHEEECCHHCCCCCCCCCCCCCC
NEAAVRSEQTSLSYSGDGDLAMGIPGALSNQPPGTAASPINAPQEDDAGDGEGEDAQDDG
CHHHHHHHHCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NQDEDGEATTQENATLGRTSRDNTINYEVDRTVEHIQHETGTIERLNAAIVVNYRDGVDE
CCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCHHEECCEEEEEEECCCCCC
DGNPTRVPLSDQEIANIRSLAQQAIGFSQARGDQLEVVNSPFDDTSEQRPEPAWWESPLL
CCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCEEEECCCCCCCHHCCCCCCCCCCCHH
WSLATTLGQYLLIGLVALFLWFKVLRPLIQRQTERPAFTPATAAPAGAAGGAEAYAATAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCC
EGTGAEEEPPAPPQKRRERRSASYEQNLRDVREIAQEDPRLVAMIVRGWMSSHE
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STAASSSTEANQGTSGQRQGNAAAPSLVDRLRGNPRVPLIIAAAASVAIIAALLMWARA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCC
PEYRVLYSTLTDADGGKIVSELDSMGVPYEFSENGQALLVPADQVNKLRLQLAEQGLPEA
CCCEEEHHHHCCCCCCHHHHHHHHCCCCEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCC
SGVGYELMDEQSFGISQFTEHVNYQRALEGELARTIEDLGPVSKARVHLAMAKPSVFVRE
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCCEEEEC
SEPASASVMLDLQRGRVLGEGQVQAIMHMVSSSVSELAISDVAVVDQTGRLLSPASDGNE
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCH
ALNGSQLDYVARVERNYAERIESILAPILGARNVKAEVSAQLDFSEREGTSETYGPNQPP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHEEECCHHCCCCCCCCCCCCCC
NEAAVRSEQTSLSYSGDGDLAMGIPGALSNQPPGTAASPINAPQEDDAGDGEGEDAQDDG
CHHHHHHHHCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NQDEDGEATTQENATLGRTSRDNTINYEVDRTVEHIQHETGTIERLNAAIVVNYRDGVDE
CCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCHHEECCEEEEEEECCCCCC
DGNPTRVPLSDQEIANIRSLAQQAIGFSQARGDQLEVVNSPFDDTSEQRPEPAWWESPLL
CCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCEEEECCCCCCCHHCCCCCCCCCCCHH
WSLATTLGQYLLIGLVALFLWFKVLRPLIQRQTERPAFTPATAAPAGAAGGAEAYAATAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCC
EGTGAEEEPPAPPQKRRERRSASYEQNLRDVREIAQEDPRLVAMIVRGWMSSHE
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]