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The map label for this gene is vacJ [C]

Identifier: 92113595

GI number: 92113595

Start: 1669994

End: 1670743

Strand: Direct

Name: vacJ [C]

Synonym: Csal_1471

Alternate gene names: 92113595

Gene position: 1669994-1670743 (Clockwise)

Preceding gene: 92113594

Following gene: 92113596

Centisome position: 45.18

GC content: 64.0

Gene sequence:

>750_bases
ATGAAAACGACCAAGTGGCTGGCCGTGGCGTGCATGGCGGCGGCGGTGAGCGGCTGTGCCAGCCAGGGGCAGACGCAGGG
CAATCCCGACGATCCGTGGGAAAGTTACAATCGCAAGGTGTTCGCTTTCAACGACACACTGGATCGCTATGCGTTGAAAC
CCGTCGCGCAGGGCTACGACTACGTGACGCCCGATCCGGTCCAGACCGGGGTGGGCAATTTCTTCAGCAACCTCGGCGAG
GTCGGCACCACGATCAACAGTGTGCTGCAATGGAAGTGGGCCAATGCCGGCATCGCCTCCGGCCGTTTCGTGATCAACTC
CATCCTCGGGGTGGGCGGCATCCTCGATCCGGCCTCGCGCATGGGCCTGGTGGAGCGCGAAGAGGACTTCGGGCAGACCC
TGGCCACCTGGGGCGTCGCCGAAGGCCCCTACGTGGTGCTGCCGGTGCTCGGTGGTCGGACGCTGCGCCATACCTCGGGG
CTGCCCGTGGACTGGTACACCGATCCGGTGACGTATGTCGAGGAGGACGAGGTACGCTATGGCCTGAGGTTCATCGATCT
CATCGATACGCGGGCGGGGCTGCTCGACCGCGAGGAGCTGATTCGGGGCGACCGCTACAGCTTCATCCGCGACGCGTATC
TGCAGAACCGGCGTTACGAGGTCAACGATGGCGAAACGGGAGCGGATCCCTTCGCCGACGGTGACTTCGGCGACGATTTC
GAATACGACGAAGACGCCTTCGCCGAGTGA

Upstream 100 bases:

>100_bases
TGCACCGGGAAAATCTGGTCGCAGGCGATGTGGGGGTGGTCTGTTCGTTCGGAGCGGGCTACAGTGCGGGCAATGTGATA
TTGCGTAAGGTGAAGGCTTG

Downstream 100 bases:

>100_bases
CCCCGAGGCCCCGCATGGCCAACTCTCGTACCCTGATCGGTCTCCTCGACCAGCCCGGCGCATCGCGGGATGCGCTGGCC
GGCCTAATTGGCCAGGGACA

Product: VacJ-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKTTKWLAVACMAAAVSGCASQGQTQGNPDDPWESYNRKVFAFNDTLDRYALKPVAQGYDYVTPDPVQTGVGNFFSNLGE
VGTTINSVLQWKWANAGIASGRFVINSILGVGGILDPASRMGLVEREEDFGQTLATWGVAEGPYVVLPVLGGRTLRHTSG
LPVDWYTDPVTYVEEDEVRYGLRFIDLIDTRAGLLDREELIRGDRYSFIRDAYLQNRRYEVNDGETGADPFADGDFGDDF
EYDEDAFAE

Sequences:

>Translated_249_residues
MKTTKWLAVACMAAAVSGCASQGQTQGNPDDPWESYNRKVFAFNDTLDRYALKPVAQGYDYVTPDPVQTGVGNFFSNLGE
VGTTINSVLQWKWANAGIASGRFVINSILGVGGILDPASRMGLVEREEDFGQTLATWGVAEGPYVVLPVLGGRTLRHTSG
LPVDWYTDPVTYVEEDEVRYGLRFIDLIDTRAGLLDREELIRGDRYSFIRDAYLQNRRYEVNDGETGADPFADGDFGDDF
EYDEDAFAE
>Mature_249_residues
MKTTKWLAVACMAAAVSGCASQGQTQGNPDDPWESYNRKVFAFNDTLDRYALKPVAQGYDYVTPDPVQTGVGNFFSNLGE
VGTTINSVLQWKWANAGIASGRFVINSILGVGGILDPASRMGLVEREEDFGQTLATWGVAEGPYVVLPVLGGRTLRHTSG
LPVDWYTDPVTYVEEDEVRYGLRFIDLIDTRAGLLDREELIRGDRYSFIRDAYLQNRRYEVNDGETGADPFADGDFGDDF
EYDEDAFAE

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=224, Percent_Identity=36.1607142857143, Blast_Score=121, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 27571; Mature: 27571

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTKWLAVACMAAAVSGCASQGQTQGNPDDPWESYNRKVFAFNDTLDRYALKPVAQGYD
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHCCCC
YVTPDPVQTGVGNFFSNLGEVGTTINSVLQWKWANAGIASGRFVINSILGVGGILDPASR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHH
MGLVEREEDFGQTLATWGVAEGPYVVLPVLGGRTLRHTSGLPVDWYTDPVTYVEEDEVRY
CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHH
GLRFIDLIDTRAGLLDREELIRGDRYSFIRDAYLQNRRYEVNDGETGADPFADGDFGDDF
HHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCC
EYDEDAFAE
CCCCHHCCC
>Mature Secondary Structure
MKTTKWLAVACMAAAVSGCASQGQTQGNPDDPWESYNRKVFAFNDTLDRYALKPVAQGYD
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHCCCC
YVTPDPVQTGVGNFFSNLGEVGTTINSVLQWKWANAGIASGRFVINSILGVGGILDPASR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHH
MGLVEREEDFGQTLATWGVAEGPYVVLPVLGGRTLRHTSGLPVDWYTDPVTYVEEDEVRY
CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHH
GLRFIDLIDTRAGLLDREELIRGDRYSFIRDAYLQNRRYEVNDGETGADPFADGDFGDDF
HHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCC
EYDEDAFAE
CCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]