| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92113596
Identifier: 92113596
GI number: 92113596
Start: 1670758
End: 1671897
Strand: Direct
Name: 92113596
Synonym: Csal_1472
Alternate gene names: NA
Gene position: 1670758-1671897 (Clockwise)
Preceding gene: 92113595
Following gene: 92113597
Centisome position: 45.2
GC content: 63.42
Gene sequence:
>1140_bases ATGGCCAACTCTCGTACCCTGATCGGTCTCCTCGACCAGCCCGGCGCATCGCGGGATGCGCTGGCCGGCCTAATTGGCCA GGGACATTTCGCCGTGCTGGCGGCGGCTCATGCCGAGGAGTTGCCTGCGGAGGTGGCCCTGGTGGTGGCGCATGTGCGCG CCGTGCCGCGCCAGGACTGGGCCGCGCTGGCGGCGCGCTGGCCGACCATCGTGATCAGCGAGACGCGTTTCGACGGCGAT CTGCTGCAGGCGGTGGATGCCGGGCTGATCGACTATCTGGTCGAGCCGCAGTGTCATGGTGACGTGCTGCGACGCCTGAT CGGACGCTCGATCGAGCATCATCGGCTGGCTCAGGAATACGCCCGGGATCGTCAGCGCCTGGCCGAACTCAACGAAAGCC TGGAAACCCACCTGGCCATGCTGCGTCTCGATCAGCAGGCCGGCTGGCAGATCCAGCGCAAGCTGCTGCCCGCCAATCCC GTGACGCGCCACGATGTCACCGCCGAGTACTGGCTGGCGCCTTCGCTGTATCTATCGGGTGACTTTCTCGACTTTCAGCG CTGCGATGCGCGTTACAGCTTCTTCTACTTCGTCGACGTCTCGGGGCACGGGGCGTCGTCGGCGTTCGTCACCGTACTGC TCAAGTACCTCAGCAACCGCTGGTTGTCGCAATGGCGCGAGCAAAACGCCAGCGACTTCCCCGCGCAGTGCCTGACCGAG CTCAATCGTGAGCTGCTGGAGACGGGGATCGGCAAGCATGCCACGGTCTTCGCCGGGGTGCTTGACCATGAGCGTCACTA TCTCCACTATTCGCTCGGCGCGCAGATGCCGATGCCGCTCTTGCAAGTGGGTCGCGAGGTCAGCGTGCTGTCGGGAGAAG GGCCGCCGGTGGGGTTGTTTCCGCATGTCGAATTCCCCACTTACGGTTATGCCTTGCCCGATGCATTTCGTCTGTGGCTG TGCTCGGACGGCATACTGGAATGTCTGGCGGGCGATACCCTCGATCAACGCCTCGTTGCGTTGAAGGAGCGCGTCGCCCA GTGCGCCCGTGTGGATGCGTTGAAAGATGCACTCGTATTGGGCGACGAACTGCCGGATGATCTCACCATCATGACTTTGA GCGGATTCGATCATGCATGA
Upstream 100 bases:
>100_bases ACGATGGCGAAACGGGAGCGGATCCCTTCGCCGACGGTGACTTCGGCGACGATTTCGAATACGACGAAGACGCCTTCGCC GAGTGACCCCGAGGCCCCGC
Downstream 100 bases:
>100_bases GGGGCGTATTCAGGCGGCGTTCAACGCCGGTGTATTCGTGCTCAAGCTGAGTGGTGACGTGCGTTTGACGCTGTGTGCCA CACTCGATCAGCAGGCGCAG
Product: serine phosphatase
Products: NA
Alternate protein names: Response Regulator; Two-Component Response Regulator; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Response Regulator Receiver Protein; Stage II Sporulation Protein E; PAS/PAC Sensor Protein; Response Regulator Receiver Domain Protein; Protein Serine/Threonine Phosphatase; Response Regulator Receiver Domain-Containing Protein; Serine Phosphatase; Anti-Sigma-Factor Antagonist Domain-Containing Protein; Response Regulator Receiver; PAS Fold Family; Stage II Sporulation Protein E Family Protein
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MANSRTLIGLLDQPGASRDALAGLIGQGHFAVLAAAHAEELPAEVALVVAHVRAVPRQDWAALAARWPTIVISETRFDGD LLQAVDAGLIDYLVEPQCHGDVLRRLIGRSIEHHRLAQEYARDRQRLAELNESLETHLAMLRLDQQAGWQIQRKLLPANP VTRHDVTAEYWLAPSLYLSGDFLDFQRCDARYSFFYFVDVSGHGASSAFVTVLLKYLSNRWLSQWREQNASDFPAQCLTE LNRELLETGIGKHATVFAGVLDHERHYLHYSLGAQMPMPLLQVGREVSVLSGEGPPVGLFPHVEFPTYGYALPDAFRLWL CSDGILECLAGDTLDQRLVALKERVAQCARVDALKDALVLGDELPDDLTIMTLSGFDHA
Sequences:
>Translated_379_residues MANSRTLIGLLDQPGASRDALAGLIGQGHFAVLAAAHAEELPAEVALVVAHVRAVPRQDWAALAARWPTIVISETRFDGD LLQAVDAGLIDYLVEPQCHGDVLRRLIGRSIEHHRLAQEYARDRQRLAELNESLETHLAMLRLDQQAGWQIQRKLLPANP VTRHDVTAEYWLAPSLYLSGDFLDFQRCDARYSFFYFVDVSGHGASSAFVTVLLKYLSNRWLSQWREQNASDFPAQCLTE LNRELLETGIGKHATVFAGVLDHERHYLHYSLGAQMPMPLLQVGREVSVLSGEGPPVGLFPHVEFPTYGYALPDAFRLWL CSDGILECLAGDTLDQRLVALKERVAQCARVDALKDALVLGDELPDDLTIMTLSGFDHA >Mature_378_residues ANSRTLIGLLDQPGASRDALAGLIGQGHFAVLAAAHAEELPAEVALVVAHVRAVPRQDWAALAARWPTIVISETRFDGDL LQAVDAGLIDYLVEPQCHGDVLRRLIGRSIEHHRLAQEYARDRQRLAELNESLETHLAMLRLDQQAGWQIQRKLLPANPV TRHDVTAEYWLAPSLYLSGDFLDFQRCDARYSFFYFVDVSGHGASSAFVTVLLKYLSNRWLSQWREQNASDFPAQCLTEL NRELLETGIGKHATVFAGVLDHERHYLHYSLGAQMPMPLLQVGREVSVLSGEGPPVGLFPHVEFPTYGYALPDAFRLWLC SDGILECLAGDTLDQRLVALKERVAQCARVDALKDALVLGDELPDDLTIMTLSGFDHA
Specific function: Unknown
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42137; Mature: 42006
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSRTLIGLLDQPGASRDALAGLIGQGHFAVLAAAHAEELPAEVALVVAHVRAVPRQDW CCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AALAARWPTIVISETRFDGDLLQAVDAGLIDYLVEPQCHGDVLRRLIGRSIEHHRLAQEY HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH ARDRQRLAELNESLETHLAMLRLDQQAGWQIQRKLLPANPVTRHDVTAEYWLAPSLYLSG HHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHCCCCCCCCCCCCCHHHEECCEEEECC DFLDFQRCDARYSFFYFVDVSGHGASSAFVTVLLKYLSNRWLSQWREQNASDFPAQCLTE CCCHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LNRELLETGIGKHATVFAGVLDHERHYLHYSLGAQMPMPLLQVGREVSVLSGEGPPVGLF HHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCEEEECCCCCCCCCC PHVEFPTYGYALPDAFRLWLCSDGILECLAGDTLDQRLVALKERVAQCARVDALKDALVL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GDELPDDLTIMTLSGFDHA CCCCCCCEEEEEECCCCCC >Mature Secondary Structure ANSRTLIGLLDQPGASRDALAGLIGQGHFAVLAAAHAEELPAEVALVVAHVRAVPRQDW CCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AALAARWPTIVISETRFDGDLLQAVDAGLIDYLVEPQCHGDVLRRLIGRSIEHHRLAQEY HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH ARDRQRLAELNESLETHLAMLRLDQQAGWQIQRKLLPANPVTRHDVTAEYWLAPSLYLSG HHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHCCCCCCCCCCCCCHHHEECCEEEECC DFLDFQRCDARYSFFYFVDVSGHGASSAFVTVLLKYLSNRWLSQWREQNASDFPAQCLTE CCCHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LNRELLETGIGKHATVFAGVLDHERHYLHYSLGAQMPMPLLQVGREVSVLSGEGPPVGLF HHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCEEEECCCCCCCCCC PHVEFPTYGYALPDAFRLWLCSDGILECLAGDTLDQRLVALKERVAQCARVDALKDALVL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GDELPDDLTIMTLSGFDHA CCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA