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The map label for this gene is glxA [H]

Identifier: 92113115

GI number: 92113115

Start: 1107364

End: 1108491

Strand: Direct

Name: glxA [H]

Synonym: Csal_0987

Alternate gene names: 92113115

Gene position: 1107364-1108491 (Clockwise)

Preceding gene: 92113114

Following gene: 92113116

Centisome position: 29.96

GC content: 65.51

Gene sequence:

>1128_bases
ATGACCCTGACGAGCGATCGCCTCGCGACGCCTGCCACCCCCAAGGCGCCCCTGCGTCTGGGTTTTCTGTTGATGGACAA
TTTCACGTTGATTTCGCTGGCCTCGGCGGTGGAGCCGTTGCGCATGGCCAACCAGCTCGCCGGGCGCGAACTCTACCAAT
GGACCACCTTGAGCGCGGACGGCGAGGCAGTACGTGCCAGCGACGGCTTGCTCATCACCCCCGACAACGGCATGCATGCC
CCCCTGGAACTCGACATGGTGTTCGTCTGCGGCGGCGTCGGCATTCAGCGCCATGTCACGCGTGAGCATGTGTTGTGGCT
GCAGGCCCAGGCGCGCCAGTCGCGACGCATCGGCGCCTTGTGTACCGGTAGCTGGGCGCTCGCCAAGGCGGGGCTGCTGG
ATGGCTACGAGTGCAGCATTCACTGGGAGTTCCAGGCCGCCGCCCAGGAGGCTTACCCGCACGCCACGCTGACCACGCGG
TTGTTTTCCATCGACCGCGACCGGGCCACGGCCTCGGGCGGGACCGCACCGCTGGACATGATGCTGACGCTGATTGCTCG
CGATCATGGTCGCGAATTGTCGGCGGCGATCTCCGACATGTTCATCTGCGATCGTGTGCGCGGCGAGCAGGACCAGCAGC
GCGTCCCGCTGCGTCATGTGCTGGGCACCAGTCAACCCAAGCTGCTCGAGATCGTCGCGCTGATGGAAGCCAACCTGGAA
GAGCCCATCGCTCTCGACGAGCTGGCGCGCTATGTGGACGTCTCCCGGCGTCAGCTGGAGCGCCTGTTCCAGAAATACCT
GAGCTGCTCGCCGTCGCGTTACTACCTCAAGTTGCGATTGACCCGGGCCCGGCAGTTGCTCAGGCAAACCTCGATGTCGA
TCATCGAAATCGCATCGGTGTGCGGGTTCGTGTCCACGCCGCATTTCTCCAAGTGCTACCGCGAATATTTCGGGACACCG
CCCCGCGACGAACGCGTGACGCGCCTCAACAGTGCCAGCGTGACGCTGGCGCCCGCTGCGCCGTCGGACGGGCACGACCC
CTATGTCGCGCCGCGTGCCTCCAGTGCCATGCAGGCGCTGGCCCAGGCGCAAGGCGAACCCACCTACGCCAGCGTACGCC
TCGTGTAG

Upstream 100 bases:

>100_bases
CCGGTCACACTCAAGGCGTTGGCCCCATACCCACAATGACAACACATCCCTGGTGAAGCATTACCAGTGGCTCCGAACGT
GACACGAAGGAGAACCGCTG

Downstream 100 bases:

>100_bases
AGTCTCGCACTCCCGCCGCTTGGCGGCATGCCCGGCATGCCGCGTTCTGGGGCCGTCCGATGCATCGGGCGGCCCCAGTG
CGTCATGCACGATGCCGGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTLTSDRLATPATPKAPLRLGFLLMDNFTLISLASAVEPLRMANQLAGRELYQWTTLSADGEAVRASDGLLITPDNGMHA
PLELDMVFVCGGVGIQRHVTREHVLWLQAQARQSRRIGALCTGSWALAKAGLLDGYECSIHWEFQAAAQEAYPHATLTTR
LFSIDRDRATASGGTAPLDMMLTLIARDHGRELSAAISDMFICDRVRGEQDQQRVPLRHVLGTSQPKLLEIVALMEANLE
EPIALDELARYVDVSRRQLERLFQKYLSCSPSRYYLKLRLTRARQLLRQTSMSIIEIASVCGFVSTPHFSKCYREYFGTP
PRDERVTRLNSASVTLAPAAPSDGHDPYVAPRASSAMQALAQAQGEPTYASVRLV

Sequences:

>Translated_375_residues
MTLTSDRLATPATPKAPLRLGFLLMDNFTLISLASAVEPLRMANQLAGRELYQWTTLSADGEAVRASDGLLITPDNGMHA
PLELDMVFVCGGVGIQRHVTREHVLWLQAQARQSRRIGALCTGSWALAKAGLLDGYECSIHWEFQAAAQEAYPHATLTTR
LFSIDRDRATASGGTAPLDMMLTLIARDHGRELSAAISDMFICDRVRGEQDQQRVPLRHVLGTSQPKLLEIVALMEANLE
EPIALDELARYVDVSRRQLERLFQKYLSCSPSRYYLKLRLTRARQLLRQTSMSIIEIASVCGFVSTPHFSKCYREYFGTP
PRDERVTRLNSASVTLAPAAPSDGHDPYVAPRASSAMQALAQAQGEPTYASVRLV
>Mature_374_residues
TLTSDRLATPATPKAPLRLGFLLMDNFTLISLASAVEPLRMANQLAGRELYQWTTLSADGEAVRASDGLLITPDNGMHAP
LELDMVFVCGGVGIQRHVTREHVLWLQAQARQSRRIGALCTGSWALAKAGLLDGYECSIHWEFQAAAQEAYPHATLTTRL
FSIDRDRATASGGTAPLDMMLTLIARDHGRELSAAISDMFICDRVRGEQDQQRVPLRHVLGTSQPKLLEIVALMEANLEE
PIALDELARYVDVSRRQLERLFQKYLSCSPSRYYLKLRLTRARQLLRQTSMSIIEIASVCGFVSTPHFSKCYREYFGTPP
RDERVTRLNSASVTLAPAAPSDGHDPYVAPRASSAMQALAQAQGEPTYASVRLV

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=112, Percent_Identity=34.8214285714286, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI226510985, Length=112, Percent_Identity=31.25, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 41485; Mature: 41354

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTSDRLATPATPKAPLRLGFLLMDNFTLISLASAVEPLRMANQLAGRELYQWTTLSAD
CCCCCCCCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCC
GEAVRASDGLLITPDNGMHAPLELDMVFVCGGVGIQRHVTREHVLWLQAQARQSRRIGAL
CCEEECCCCEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
CTGSWALAKAGLLDGYECSIHWEFQAAAQEAYPHATLTTRLFSIDRDRATASGGTAPLDM
ECCCHHHHHHCCCCCEEEEEEEEEHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHH
MLTLIARDHGRELSAAISDMFICDRVRGEQDQQRVPLRHVLGTSQPKLLEIVALMEANLE
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHCCCC
EPIALDELARYVDVSRRQLERLFQKYLSCSPSRYYLKLRLTRARQLLRQTSMSIIEIASV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH
CGFVSTPHFSKCYREYFGTPPRDERVTRLNSASVTLAPAAPSDGHDPYVAPRASSAMQAL
HHCCCCCCHHHHHHHHCCCCCCCCHHHEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
AQAQGEPTYASVRLV
HHHCCCCCEEEEEEC
>Mature Secondary Structure 
TLTSDRLATPATPKAPLRLGFLLMDNFTLISLASAVEPLRMANQLAGRELYQWTTLSAD
CCCCCCCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCC
GEAVRASDGLLITPDNGMHAPLELDMVFVCGGVGIQRHVTREHVLWLQAQARQSRRIGAL
CCEEECCCCEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
CTGSWALAKAGLLDGYECSIHWEFQAAAQEAYPHATLTTRLFSIDRDRATASGGTAPLDM
ECCCHHHHHHCCCCCEEEEEEEEEHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHH
MLTLIARDHGRELSAAISDMFICDRVRGEQDQQRVPLRHVLGTSQPKLLEIVALMEANLE
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHCCCC
EPIALDELARYVDVSRRQLERLFQKYLSCSPSRYYLKLRLTRARQLLRQTSMSIIEIASV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH
CGFVSTPHFSKCYREYFGTPPRDERVTRLNSASVTLAPAAPSDGHDPYVAPRASSAMQAL
HHCCCCCCHHHHHHHHCCCCCCCCHHHEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
AQAQGEPTYASVRLV
HHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]