| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92113116
Identifier: 92113116
GI number: 92113116
Start: 1108690
End: 1109667
Strand: Direct
Name: 92113116
Synonym: Csal_0988
Alternate gene names: NA
Gene position: 1108690-1109667 (Clockwise)
Preceding gene: 92113115
Following gene: 92113117
Centisome position: 29.99
GC content: 61.25
Gene sequence:
>978_bases ATGACCGCGCAATCACTGCACGACGACGCCATCGTCATCGATGGCCTGATCATCGCCAAATGGGGCCGCGATCTCCTCGA GGACATGCGCCGGGGCGGACTGACCGCCGCCAATTGCACCGTCTCGGTATGGGAGGGGTTCCAGGCCACCGTCGACAACA TCGTCGAGACCAATGCGCTCCTCGCGGCGTGCGATGATCTGGTGCGACCCGTGCATACCACCGCCGACATCATCCGCGCC AAGGAAGAAGGCAAGACCGGCATCATCTACGGTTTTCAGAACGCCCATGCCTTCGAGGATCAGATCGGCTACGTCGAGGT CTTCAAGAAGCTCGGCGTGGGCATTGTGCAGATGTGCTACAACACCCAGAACCTGGTGGGCACCGGCTGCTACGAACGCG ACGGCGGGTTGTCCGGCTTCGGTCGCGAGATCGTCGCCGAGATGAATCGCGTGGGCATGATGTGCGACCTATCCCACGTC GGTGAGACCACTTCCCGAGAGGTCATCGAGGCCTCCGAGAAACCGGTCTGCTATTCCCATTGCCTGCCTTCCGGCCTCAA GGAACATCCGCGCAACAAGTCCGACGAGGAACTCAGGTTCATCGCCGACCATGGCGGTTTCGTCGGCGTGACCATGTTCA CCCCCTTCCTGCGCGCCGGGGTCGACGCCACCGTCGACGATTATGTCGAGGCCATCGAATACGTGATGAACATCGTCGGC GAGGATGCCATCGGCATCGGCACCGACTTCACCCAGGGCCAGGACCAGGCCTTTTTCGAATGGCTCACCCACGACAAGGG CTACGCCCGGCGCCTGACCAACTTCGGCACCATCATCAACCCCGAGGGCATTCGTACCATCGGCGAGTTTCCCAATCTCA CCGAGGCGCTCTTGCGACGCGGCATGAGCGAGCGACAAGTGCGCAAGATCATGGGTGAGAACTGGATGCGTGTTTTGAAA GAGGTATGGGGCGCCTGA
Upstream 100 bases:
>100_bases CGCGTGACGCATTTGGAATTTTCCTCGTCGCTTCCAAGCGTCGGCGGCCCCGGGGCCGGGGCTATGCTGGCCGCATGAAG CCATCCCCGGAGCGACGCAC
Downstream 100 bases:
>100_bases GGGCAATACTTCTGCATATAAGGGGCACCGGGGGAGGCCGAAGAGGAGGTCCGATTCCAGGGAGGGAATCGCTAGCGTAC AGGGATGTATCCACAGCGCC
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTAQSLHDDAIVIDGLIIAKWGRDLLEDMRRGGLTAANCTVSVWEGFQATVDNIVETNALLAACDDLVRPVHTTADIIRA KEEGKTGIIYGFQNAHAFEDQIGYVEVFKKLGVGIVQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMNRVGMMCDLSHV GETTSREVIEASEKPVCYSHCLPSGLKEHPRNKSDEELRFIADHGGFVGVTMFTPFLRAGVDATVDDYVEAIEYVMNIVG EDAIGIGTDFTQGQDQAFFEWLTHDKGYARRLTNFGTIINPEGIRTIGEFPNLTEALLRRGMSERQVRKIMGENWMRVLK EVWGA
Sequences:
>Translated_325_residues MTAQSLHDDAIVIDGLIIAKWGRDLLEDMRRGGLTAANCTVSVWEGFQATVDNIVETNALLAACDDLVRPVHTTADIIRA KEEGKTGIIYGFQNAHAFEDQIGYVEVFKKLGVGIVQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMNRVGMMCDLSHV GETTSREVIEASEKPVCYSHCLPSGLKEHPRNKSDEELRFIADHGGFVGVTMFTPFLRAGVDATVDDYVEAIEYVMNIVG EDAIGIGTDFTQGQDQAFFEWLTHDKGYARRLTNFGTIINPEGIRTIGEFPNLTEALLRRGMSERQVRKIMGENWMRVLK EVWGA >Mature_324_residues TAQSLHDDAIVIDGLIIAKWGRDLLEDMRRGGLTAANCTVSVWEGFQATVDNIVETNALLAACDDLVRPVHTTADIIRAK EEGKTGIIYGFQNAHAFEDQIGYVEVFKKLGVGIVQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMNRVGMMCDLSHVG ETTSREVIEASEKPVCYSHCLPSGLKEHPRNKSDEELRFIADHGGFVGVTMFTPFLRAGVDATVDDYVEAIEYVMNIVGE DAIGIGTDFTQGQDQAFFEWLTHDKGYARRLTNFGTIINPEGIRTIGEFPNLTEALLRRGMSERQVRKIMGENWMRVLKE VWGA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=245, Percent_Identity=26.9387755102041, Blast_Score=114, Evalue=8e-26, Organism=Homo sapiens, GI189458885, Length=259, Percent_Identity=25.8687258687259, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI4758190, Length=259, Percent_Identity=25.8687258687259, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI193211608, Length=245, Percent_Identity=25.7142857142857, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI193211610, Length=245, Percent_Identity=25.7142857142857, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI281362638, Length=318, Percent_Identity=27.0440251572327, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI281362636, Length=318, Percent_Identity=27.0440251572327, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI161083233, Length=315, Percent_Identity=25.7142857142857, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI221475880, Length=317, Percent_Identity=25.2365930599369, Blast_Score=118, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 36025; Mature: 35894
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQSLHDDAIVIDGLIIAKWGRDLLEDMRRGGLTAANCTVSVWEGFQATVDNIVETNAL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHH LAACDDLVRPVHTTADIIRAKEEGKTGIIYGFQNAHAFEDQIGYVEVFKKLGVGIVQMCY HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH NTQNLVGTGCYERDGGLSGFGREIVAEMNRVGMMCDLSHVGETTSREVIEASEKPVCYSH CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEHHHHCCHHHHHHHHCCCCCCHHHH CLPSGLKEHPRNKSDEELRFIADHGGFVGVTMFTPFLRAGVDATVDDYVEAIEYVMNIVG HCCHHHHHCCCCCCCHHHEEEECCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC EDAIGIGTDFTQGQDQAFFEWLTHDKGYARRLTNFGTIINPEGIRTIGEFPNLTEALLRR CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCEECCCHHHHHHCCCCHHHHHHHC GMSERQVRKIMGENWMRVLKEVWGA CCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAQSLHDDAIVIDGLIIAKWGRDLLEDMRRGGLTAANCTVSVWEGFQATVDNIVETNAL CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHH LAACDDLVRPVHTTADIIRAKEEGKTGIIYGFQNAHAFEDQIGYVEVFKKLGVGIVQMCY HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH NTQNLVGTGCYERDGGLSGFGREIVAEMNRVGMMCDLSHVGETTSREVIEASEKPVCYSH CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEHHHHCCHHHHHHHHCCCCCCHHHH CLPSGLKEHPRNKSDEELRFIADHGGFVGVTMFTPFLRAGVDATVDDYVEAIEYVMNIVG HCCHHHHHCCCCCCCHHHEEEECCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC EDAIGIGTDFTQGQDQAFFEWLTHDKGYARRLTNFGTIINPEGIRTIGEFPNLTEALLRR CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCEECCCHHHHHHCCCCHHHHHHHC GMSERQVRKIMGENWMRVLKEVWGA CCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]