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The map label for this gene is ubiD [H]

Identifier: 92112718

GI number: 92112718

Start: 650129

End: 651697

Strand: Direct

Name: ubiD [H]

Synonym: Csal_0585

Alternate gene names: 92112718

Gene position: 650129-651697 (Clockwise)

Preceding gene: 92112717

Following gene: 92112719

Centisome position: 17.59

GC content: 65.33

Gene sequence:

>1569_bases
ATGTTATGCTGCCCTTTTTCGCGTTCTGGCACGGAAAACCACATGAAGTATCGGGACTTGCGCGATTTCATCGCGGCGCT
GGAAGCACGTGGCGAGCTCACGCGGGTGACGGCGGAGGTCGATCCCTACCTGGAGATCACCGAAATCTGCGACCGCACCC
TGCGGGCCGGGGGGCCGGCGTTGCTGTTCGAGAACGTCAAGGGCCACGCCATGCCGTTGCTGGGCAACCTGTTCGGCACG
CCGGAGCGGGTCGCGCTGGGCATGGGCCAGGACTCGACCGCCGCGCTGCGCGAGGTCGGCGAGCTGCTGGCGTTTCTCAA
GGAGCCGGAGCCGCCCAAGGGCTTTCGCGATGCCTGGGAAAAGCTGCCGATCTTCAAGCAGGCGATGAGCATGGGGCCCA
AGACGCTGCGCAAGGCGCCCTGTCAGGAAGTGATCCTGGAAGGCGACGACGTCGACCTCGACCGCCTGCCGATCCAGCAT
TGCTGGCCGGGCGACGTGGCGCCGCTGGTGACCTGGTCGCTGGTGGTGACCAAAGGGCCGAACAAGACGCGCCAGAACCT
GGGGATATACCGCCAGCAGAAGCTGGGCAAGAACCGCCTGATCATGCGCTGGCTCTCGCACCGCGGCGGCGCGCTCGACT
TCCAGGAATGGCAGAGTGCGCATCCCGGCGAGCCGTTTCCGGTCGCCGTCGCACTGGGCGCCGATCCGGCGACCATCCTG
GGCGCGGTGACGCCGGTACCCGACAACCTCTCCGAGTACGCGTTCGCGGGGCTGCTGCGCGGATCACGCACCGAGCTGGT
CAAGTGCGGGCATGCCGATCTCGAGGTGCCGGCGTCCAGCGAGATCGTCCTCGAGGGCTACATCTACCCTGATGACACCG
CTCCCGAAGGCCCCTACGGCGACCATACCGGCTATTACAACGAGGTCGAGACCTTCCCGGTGTTCACTGTCGAGCGGATC
ACCCATCGCCGCGATCCGATCTATCATTCGACCTATACCGGGCGTCCGCCGGACGAGCCCGCCATTCTGGGGTTGGCGCT
CAACGAAGTGTTCGTGCCGATCCTGCGCAAGCAATTCCCCGAAATCGTCGATTTCTACCTGCCCCCGGAAGGCTGCTCCT
ATCGCATGGCGGTGGTGACCATGAAAAAGCAGTATCCGGGGCACGCCAAGCGCGTGATGATGGGCGTATGGAGCTTCCTG
CGCCAGTTCATGTACACCAAGTTCGTGATCGTCCTCGACGACGATGTCGACGCGCGCAACTGGGAGGACGTGATCTGGGC
GATCACGACCCGCATGGACCCGGCACGCGACACGGTGATGGTCGAAAACACCCCCATCGATTATCTCGACTTCGCCTCGC
CGACCGCGGGGCTGGGCTCGAAGATGGGGCTCGACGCGACGACCAAATGGGCGGGCGAGACCCAGCGCGAGTGGGGGACC
CCCATCGTCATGGACGAGGCCGTCAAGCGGCGCGTCGATGAGCGCTGGGGGGAATACGGCATCGCCACGCCGCCACCGCC
ACCCCGCCATTCGCCCCCGAGCGACGAACGAGGACACGATGACGTCTAA

Upstream 100 bases:

>100_bases
CAGGGATGGAGTCATAGCGCCTTCGGAAGGCCTGCCCCGGCTGACGCGTGCAAGATATCGCCGGGCTGAAGGTCGATGGG
CGGTCAATGAAAGGGGCGGC

Downstream 100 bases:

>100_bases
GACACTGACCTGCCAAGTCACGTCGGTCGAGGATCTGACGCCCGACGTATTCCGCGTCCATTTGACGGGACGCCGCGAAG
CCATTGCGCATGCGCCGGGG

Product: 3-octaprenyl-4hydroxybenzoate decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MLCCPFSRSGTENHMKYRDLRDFIAALEARGELTRVTAEVDPYLEITEICDRTLRAGGPALLFENVKGHAMPLLGNLFGT
PERVALGMGQDSTAALREVGELLAFLKEPEPPKGFRDAWEKLPIFKQAMSMGPKTLRKAPCQEVILEGDDVDLDRLPIQH
CWPGDVAPLVTWSLVVTKGPNKTRQNLGIYRQQKLGKNRLIMRWLSHRGGALDFQEWQSAHPGEPFPVAVALGADPATIL
GAVTPVPDNLSEYAFAGLLRGSRTELVKCGHADLEVPASSEIVLEGYIYPDDTAPEGPYGDHTGYYNEVETFPVFTVERI
THRRDPIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFL
RQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPTAGLGSKMGLDATTKWAGETQREWGT
PIVMDEAVKRRVDERWGEYGIATPPPPPRHSPPSDERGHDDV

Sequences:

>Translated_522_residues
MLCCPFSRSGTENHMKYRDLRDFIAALEARGELTRVTAEVDPYLEITEICDRTLRAGGPALLFENVKGHAMPLLGNLFGT
PERVALGMGQDSTAALREVGELLAFLKEPEPPKGFRDAWEKLPIFKQAMSMGPKTLRKAPCQEVILEGDDVDLDRLPIQH
CWPGDVAPLVTWSLVVTKGPNKTRQNLGIYRQQKLGKNRLIMRWLSHRGGALDFQEWQSAHPGEPFPVAVALGADPATIL
GAVTPVPDNLSEYAFAGLLRGSRTELVKCGHADLEVPASSEIVLEGYIYPDDTAPEGPYGDHTGYYNEVETFPVFTVERI
THRRDPIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFL
RQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPTAGLGSKMGLDATTKWAGETQREWGT
PIVMDEAVKRRVDERWGEYGIATPPPPPRHSPPSDERGHDDV
>Mature_522_residues
MLCCPFSRSGTENHMKYRDLRDFIAALEARGELTRVTAEVDPYLEITEICDRTLRAGGPALLFENVKGHAMPLLGNLFGT
PERVALGMGQDSTAALREVGELLAFLKEPEPPKGFRDAWEKLPIFKQAMSMGPKTLRKAPCQEVILEGDDVDLDRLPIQH
CWPGDVAPLVTWSLVVTKGPNKTRQNLGIYRQQKLGKNRLIMRWLSHRGGALDFQEWQSAHPGEPFPVAVALGADPATIL
GAVTPVPDNLSEYAFAGLLRGSRTELVKCGHADLEVPASSEIVLEGYIYPDDTAPEGPYGDHTGYYNEVETFPVFTVERI
THRRDPIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFL
RQFMYTKFVIVLDDDVDARNWEDVIWAITTRMDPARDTVMVENTPIDYLDFASPTAGLGSKMGLDATTKWAGETQREWGT
PIVMDEAVKRRVDERWGEYGIATPPPPPRHSPPSDERGHDDV

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=489, Percent_Identity=77.7096114519427, Blast_Score=794, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=512, Percent_Identity=25.9765625, Blast_Score=149, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 58461; Mature: 58461

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCCPFSRSGTENHMKYRDLRDFIAALEARGELTRVTAEVDPYLEITEICDRTLRAGGPA
CEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCE
LLFENVKGHAMPLLGNLFGTPERVALGMGQDSTAALREVGELLAFLKEPEPPKGFRDAWE
EEEECCCCCHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KLPIFKQAMSMGPKTLRKAPCQEVILEGDDVDLDRLPIQHCWPGDVAPLVTWSLVVTKGP
HCHHHHHHHHCCHHHHHHCCHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHEEEEEEECCC
NKTRQNLGIYRQQKLGKNRLIMRWLSHRGGALDFQEWQSAHPGEPFPVAVALGADPATIL
CHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEECCCCHHHH
GAVTPVPDNLSEYAFAGLLRGSRTELVKCGHADLEVPASSEIVLEGYIYPDDTAPEGPYG
EECCCCCCCHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
DHTGYYNEVETFPVFTVERITHRRDPIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFP
CCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
EIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARN
HHHHCCCCCCCCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC
WEDVIWAITTRMDPARDTVMVENTPIDYLDFASPTAGLGSKMGLDATTKWAGETQREWGT
HHHEEEEEECCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
PIVMDEAVKRRVDERWGEYGIATPPPPPRHSPPSDERGHDDV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLCCPFSRSGTENHMKYRDLRDFIAALEARGELTRVTAEVDPYLEITEICDRTLRAGGPA
CEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCE
LLFENVKGHAMPLLGNLFGTPERVALGMGQDSTAALREVGELLAFLKEPEPPKGFRDAWE
EEEECCCCCHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KLPIFKQAMSMGPKTLRKAPCQEVILEGDDVDLDRLPIQHCWPGDVAPLVTWSLVVTKGP
HCHHHHHHHHCCHHHHHHCCHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHEEEEEEECCC
NKTRQNLGIYRQQKLGKNRLIMRWLSHRGGALDFQEWQSAHPGEPFPVAVALGADPATIL
CHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEECCCCHHHH
GAVTPVPDNLSEYAFAGLLRGSRTELVKCGHADLEVPASSEIVLEGYIYPDDTAPEGPYG
EECCCCCCCHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
DHTGYYNEVETFPVFTVERITHRRDPIYHSTYTGRPPDEPAILGLALNEVFVPILRKQFP
CCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
EIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVLDDDVDARN
HHHHCCCCCCCCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC
WEDVIWAITTRMDPARDTVMVENTPIDYLDFASPTAGLGSKMGLDATTKWAGETQREWGT
HHHEEEEEECCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
PIVMDEAVKRRVDERWGEYGIATPPPPPRHSPPSDERGHDDV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA