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The map label for this gene is yisS [H]

Identifier: 92112420

GI number: 92112420

Start: 323642

End: 324580

Strand: Direct

Name: yisS [H]

Synonym: Csal_0286

Alternate gene names: 92112420

Gene position: 323642-324580 (Clockwise)

Preceding gene: 92112419

Following gene: 92112426

Centisome position: 8.76

GC content: 59.42

Gene sequence:

>939_bases
ATGAAATCCCCTGTACGCATCCTGATGGTCGGTGAAGGGGCCATTGCCGCGATTCACATGCAGGCCCTGGGGCATGTTCC
CGCCGCCAGCGTCGTGGCCGTCGCCGGCGGCGATGAGCGCAATACGAGACGCTTTGCCGAGACCTGGGGCATCGAACGCG
TCTTCACCGATTATGCGCATGCACTGGAGGCATCCGGAGTCGATGCCGTGATCCTGGCGACGCCGAGCCCGTTGCATGCC
CGCCAGGCCGAGCAGGCGATCGATGCCGGCAAACATGTCCTCTGCGAAATTCCCATGAGCCTGAACCTGGCGGATGCCGA
GCGCATGACGCGGCGAGCCCGTGAGGCAAGCACCGTCGCCATGGTGGCCCACACACGTCGCTTCAATGCACCGCATCGCG
AAATGAAGCGCCGTCTTCGGGCGGGGGAATTCCATCTTCAACATCTGGTGAGCGAGACGTATTTCCTGCGTCGCGAAAAC
CTCAACATGCAAGGCGAACCGCGCGGCTGGACGGATCATCTGTTATGGCACCATGCCTGCCATAGCGTGGATCTCTTCGC
CTGGTTGCTGGACGATGACGTCCTCGACGCCTGGGGAAGTCAAGGGCCGCTGCATTCGGAACTTGGCATCGCCATGGACA
TGAACATCGGCCTGCGGGCGACCGACGGTACGTTGGCCACGCTGGCGCTTTCCTTCAACAATCGTGGTCCCTTTGGCGGG
TTTTATCGCTACATTGGTGAGGAAAATACCTTGCTGGCGTATCGTGACGAACTCAAGGACTACGAGGGAAATGTCGTACC
GCTGTCGACACCTGGGTTTCACGCCCAGGATACCGAGTTCGTGACGTCTATCATTGAGAAACGTGCCCCGGAAGCTTCGT
TTTCTTCCTGCCTTCCTACCATGCGGATTCTCGATAAGCTCTCCCATAACATGGTGTAA

Upstream 100 bases:

>100_bases
TGCCGGATTCGTCGGTGTCGTGACGTTTCCGCCTTGCCTCCACGCGACCGTTGTGTCACCACTCCCCAATCGAAATGGAT
GAAACGGTCGAGATGTGACG

Downstream 100 bases:

>100_bases
ATATCCTGATTTCTATTGTCTTTTCCTTCTCCTGGAATGAAAAAGGCTGGCGTAACGCCAGCCGAAATCACGATCGATCA
TCGTCGTATCACTAGAACTG

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKSPVRILMVGEGAIAAIHMQALGHVPAASVVAVAGGDERNTRRFAETWGIERVFTDYAHALEASGVDAVILATPSPLHA
RQAEQAIDAGKHVLCEIPMSLNLADAERMTRRAREASTVAMVAHTRRFNAPHREMKRRLRAGEFHLQHLVSETYFLRREN
LNMQGEPRGWTDHLLWHHACHSVDLFAWLLDDDVLDAWGSQGPLHSELGIAMDMNIGLRATDGTLATLALSFNNRGPFGG
FYRYIGEENTLLAYRDELKDYEGNVVPLSTPGFHAQDTEFVTSIIEKRAPEASFSSCLPTMRILDKLSHNMV

Sequences:

>Translated_312_residues
MKSPVRILMVGEGAIAAIHMQALGHVPAASVVAVAGGDERNTRRFAETWGIERVFTDYAHALEASGVDAVILATPSPLHA
RQAEQAIDAGKHVLCEIPMSLNLADAERMTRRAREASTVAMVAHTRRFNAPHREMKRRLRAGEFHLQHLVSETYFLRREN
LNMQGEPRGWTDHLLWHHACHSVDLFAWLLDDDVLDAWGSQGPLHSELGIAMDMNIGLRATDGTLATLALSFNNRGPFGG
FYRYIGEENTLLAYRDELKDYEGNVVPLSTPGFHAQDTEFVTSIIEKRAPEASFSSCLPTMRILDKLSHNMV
>Mature_312_residues
MKSPVRILMVGEGAIAAIHMQALGHVPAASVVAVAGGDERNTRRFAETWGIERVFTDYAHALEASGVDAVILATPSPLHA
RQAEQAIDAGKHVLCEIPMSLNLADAERMTRRAREASTVAMVAHTRRFNAPHREMKRRLRAGEFHLQHLVSETYFLRREN
LNMQGEPRGWTDHLLWHHACHSVDLFAWLLDDDVLDAWGSQGPLHSELGIAMDMNIGLRATDGTLATLALSFNNRGPFGG
FYRYIGEENTLLAYRDELKDYEGNVVPLSTPGFHAQDTEFVTSIIEKRAPEASFSSCLPTMRILDKLSHNMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=143, Percent_Identity=24.4755244755245, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34718; Mature: 34718

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPVRILMVGEGAIAAIHMQALGHVPAASVVAVAGGDERNTRRFAETWGIERVFTDYAH
CCCCEEEEEECCCCEEEHHHHHHCCCCCHHEEEEECCCCCHHHHHHHHHCHHHHHHHHHH
ALEASGVDAVILATPSPLHARQAEQAIDAGKHVLCEIPMSLNLADAERMTRRAREASTVA
HHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
MVAHTRRFNAPHREMKRRLRAGEFHLQHLVSETYFLRRENLNMQGEPRGWTDHLLWHHAC
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
HSVDLFAWLLDDDVLDAWGSQGPLHSELGIAMDMNIGLRATDGTLATLALSFNNRGPFGG
HHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEECCCCEEECCCCEEEEEEEECCCCCCCH
FYRYIGEENTLLAYRDELKDYEGNVVPLSTPGFHAQDTEFVTSIIEKRAPEASFSSCLPT
HHHHHCCCCCEEEEHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
MRILDKLSHNMV
HHHHHHHHHCCC
>Mature Secondary Structure
MKSPVRILMVGEGAIAAIHMQALGHVPAASVVAVAGGDERNTRRFAETWGIERVFTDYAH
CCCCEEEEEECCCCEEEHHHHHHCCCCCHHEEEEECCCCCHHHHHHHHHCHHHHHHHHHH
ALEASGVDAVILATPSPLHARQAEQAIDAGKHVLCEIPMSLNLADAERMTRRAREASTVA
HHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
MVAHTRRFNAPHREMKRRLRAGEFHLQHLVSETYFLRRENLNMQGEPRGWTDHLLWHHAC
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
HSVDLFAWLLDDDVLDAWGSQGPLHSELGIAMDMNIGLRATDGTLATLALSFNNRGPFGG
HHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEECCCCEEECCCCEEEEEEEECCCCCCCH
FYRYIGEENTLLAYRDELKDYEGNVVPLSTPGFHAQDTEFVTSIIEKRAPEASFSSCLPT
HHHHHCCCCCEEEEHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
MRILDKLSHNMV
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]