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The map label for this gene is yibN [H]

Identifier: 92112183

GI number: 92112183

Start: 56557

End: 56976

Strand: Direct

Name: yibN [H]

Synonym: Csal_0047

Alternate gene names: 92112183

Gene position: 56557-56976 (Clockwise)

Preceding gene: 92112174

Following gene: 92112184

Centisome position: 1.53

GC content: 62.86

Gene sequence:

>420_bases
ATGATCGATCAGCTATTCGAATTCGTGCAGAACCACCTGCTTTTGTCAGGCGCTTTTCTGGTGGTATTGGTGGCGTGGAT
CGCCTACGAGCTCAGGAACTCGAGCAACGGCGTCTCGCCGTCCGAGGCCACCGCGCTGGTCAATCGCGAGGATGGCCTGT
TCCTCGACATCCGCGAGGTGAAGGATTTCAAGGCGGGGCACATCGCCGGCGCGCGCAACATTCCCCAGGGCCGCCTGAAC
GATCGTCTCAAGGAGCTCGAGGCGTTCAAGGAGAAGCCGGTCGTGGTGGTGTGCAAGCATGGCCAGAGCTCCGGCGCCGC
TGTGGGCCAACTGACCCAGGCGGGCTTCACGCGGGCCACCAAGCTGAAGGGCGGAATGACCCAGTGGCAGTCCGACGAGC
TGCCGGTGGTGCGCAAGTAA

Upstream 100 bases:

>100_bases
GGGGCGTCACGCGTCGTCCGTCGAGCGACGACGACTCGACCGAGCGCGGCCCGACTGGATACGCGGCCCGACCGACATAC
AACGAGAGTTATCCGCACTC

Downstream 100 bases:

>100_bases
TCGTTATCCCGACGGGGCGGTGCACGCCGGGCCCCGTGTCTCATGCATAGCTCAGTCAAAGGAAGTACGACATGGCGGAA
GACAACAATCAGGCCGCTCA

Product: rhodanese-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MIDQLFEFVQNHLLLSGAFLVVLVAWIAYELRNSSNGVSPSEATALVNREDGLFLDIREVKDFKAGHIAGARNIPQGRLN
DRLKELEAFKEKPVVVVCKHGQSSGAAVGQLTQAGFTRATKLKGGMTQWQSDELPVVRK

Sequences:

>Translated_139_residues
MIDQLFEFVQNHLLLSGAFLVVLVAWIAYELRNSSNGVSPSEATALVNREDGLFLDIREVKDFKAGHIAGARNIPQGRLN
DRLKELEAFKEKPVVVVCKHGQSSGAAVGQLTQAGFTRATKLKGGMTQWQSDELPVVRK
>Mature_139_residues
MIDQLFEFVQNHLLLSGAFLVVLVAWIAYELRNSSNGVSPSEATALVNREDGLFLDIREVKDFKAGHIAGARNIPQGRLN
DRLKELEAFKEKPVVVVCKHGQSSGAAVGQLTQAGFTRATKLKGGMTQWQSDELPVVRK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=141, Percent_Identity=36.1702127659575, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15290; Mature: 15290

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQLFEFVQNHLLLSGAFLVVLVAWIAYELRNSSNGVSPSEATALVNREDGLFLDIREV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEECCCCCEEEHHHH
KDFKAGHIAGARNIPQGRLNDRLKELEAFKEKPVVVVCKHGQSSGAAVGQLTQAGFTRAT
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
KLKGGMTQWQSDELPVVRK
HHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDQLFEFVQNHLLLSGAFLVVLVAWIAYELRNSSNGVSPSEATALVNREDGLFLDIREV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEECCCCCEEEHHHH
KDFKAGHIAGARNIPQGRLNDRLKELEAFKEKPVVVVCKHGQSSGAAVGQLTQAGFTRAT
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
KLKGGMTQWQSDELPVVRK
HHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]