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The map label for this gene is traI [H]

Identifier: 92109691

GI number: 92109691

Start: 25537

End: 26160

Strand: Reverse

Name: traI [H]

Synonym: Nham_4570

Alternate gene names: 92109691

Gene position: 26160-25537 (Counterclockwise)

Preceding gene: 92109697

Following gene: 92109690

Centisome position: 21.55

GC content: 63.78

Gene sequence:

>624_bases
ATGCGGGCCATAGCAATCGATGCGAACGAAGACAGTGGAATGCGTTCTCTGCTCGACGGGATGCATCAGTTGCGTGCTCG
GGTGTTCCCCGGCTGGCTCGGCTGGCAGGTGAGAATCGAACAGGGACACGAGCGGGACGAATACGACGCCCTCGGTCCGA
CCTACATCCTGGCCCTGACGGATCATGGCGATGTCGCCGGCTGCGCGCGCCTGCTTCCGACCATCGACCCGAACATGCTG
TCGCAGACCTTTCCGCAGTTACTCGCGAGCGGTCGGCTACGGGCTAAGCCCACCAGGATCGAGAGCTCACGTTTTTGCGT
CGACAGCCAACGCGAGGGGAGGGGAGGCCGGTGCCTGCACGAGGCGATATTGACGATGTTCGCAGGCGTCATCGAGTGGT
CGATGTCCAACGGCTACGACGAGATCGTCACGGCAACGGATGTGCTTTTCGAGCGCATCCTGCAGCGGGCGGGCTGGCCG
ATGACGCGCCTCGGCGGCGTCGAACTGATCGGCGAGACTATGAGCGTCGCCGGCATCCTGCCAGCCGATCGGACGAGCTT
CGAACAGGTCTATCCGCCGGGCTATTGCTCCGACCTGCGCCGCCTTAAGCGCGCCGCAGCATGA

Upstream 100 bases:

>100_bases
TCCGAGCTCGCCGAGACCCCGTTAATTCTACAGAGGGTCCGTCCCGCCGCTTCATGCTGATTTGCCTCCGCTCACCTGAA
CACGACGGAGGAATCAGCGG

Downstream 100 bases:

>100_bases
CCGCCGGCGCCCTGGTCATGGCCGAACTTCGTTCCCATCCGCGGCTTGTCCGCAAGCTCCACGACGCATTGGGCGACCAG
ATCTGCGCCGCGCTCGACGA

Product: putative autoinducer synthesis protein

Products: NA

Alternate protein names: Autoinducer synthesis protein traI [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRAIAIDANEDSGMRSLLDGMHQLRARVFPGWLGWQVRIEQGHERDEYDALGPTYILALTDHGDVAGCARLLPTIDPNML
SQTFPQLLASGRLRAKPTRIESSRFCVDSQREGRGGRCLHEAILTMFAGVIEWSMSNGYDEIVTATDVLFERILQRAGWP
MTRLGGVELIGETMSVAGILPADRTSFEQVYPPGYCSDLRRLKRAAA

Sequences:

>Translated_207_residues
MRAIAIDANEDSGMRSLLDGMHQLRARVFPGWLGWQVRIEQGHERDEYDALGPTYILALTDHGDVAGCARLLPTIDPNML
SQTFPQLLASGRLRAKPTRIESSRFCVDSQREGRGGRCLHEAILTMFAGVIEWSMSNGYDEIVTATDVLFERILQRAGWP
MTRLGGVELIGETMSVAGILPADRTSFEQVYPPGYCSDLRRLKRAAA
>Mature_207_residues
MRAIAIDANEDSGMRSLLDGMHQLRARVFPGWLGWQVRIEQGHERDEYDALGPTYILALTDHGDVAGCARLLPTIDPNML
SQTFPQLLASGRLRAKPTRIESSRFCVDSQREGRGGRCLHEAILTMFAGVIEWSMSNGYDEIVTATDVLFERILQRAGWP
MTRLGGVELIGETMSVAGILPADRTSFEQVYPPGYCSDLRRLKRAAA

Specific function: Required for the synthesis of OHHL (N-(3-oxohexanoyl)-L- homoserine lactone), an autoinducer molecule which binds to traR and thus acts in the control of conjugal transfer [H]

COG id: COG3916

COG function: function code TQ; N-acyl-L-homoserine lactone synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autoinducer synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR001690
- InterPro:   IPR018311 [H]

Pfam domain/function: PF00765 Autoind_synth [H]

EC number: =2.3.1.184 [H]

Molecular weight: Translated: 23010; Mature: 23010

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIAIDANEDSGMRSLLDGMHQLRARVFPGWLGWQVRIEQGHERDEYDALGPTYILALT
CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
DHGDVAGCARLLPTIDPNMLSQTFPQLLASGRLRAKPTRIESSRFCVDSQREGRGGRCLH
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
EAILTMFAGVIEWSMSNGYDEIVTATDVLFERILQRAGWPMTRLGGVELIGETMSVAGIL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCC
PADRTSFEQVYPPGYCSDLRRLKRAAA
CCCCCCHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRAIAIDANEDSGMRSLLDGMHQLRARVFPGWLGWQVRIEQGHERDEYDALGPTYILALT
CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
DHGDVAGCARLLPTIDPNMLSQTFPQLLASGRLRAKPTRIESSRFCVDSQREGRGGRCLH
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
EAILTMFAGVIEWSMSNGYDEIVTATDVLFERILQRAGWPMTRLGGVELIGETMSVAGIL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCC
PADRTSFEQVYPPGYCSDLRRLKRAAA
CCCCCCHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8188582 [H]