| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is exoU [H]
Identifier: 91785600
GI number: 91785600
Start: 4657676
End: 4658482
Strand: Reverse
Name: exoU [H]
Synonym: Bxe_A0177
Alternate gene names: 91785600
Gene position: 4658482-4657676 (Counterclockwise)
Preceding gene: 91785602
Following gene: 91785599
Centisome position: 95.15
GC content: 66.42
Gene sequence:
>807_bases ATGACGCCCATTTCGATCATCATTCCCTGCTACAACGGCGCGGCGACGCTCGTCCGTGCTTTGCAAAGCTGCCGGATCCA GCCGGAGGCCGCGCAGATCATCGTGGTGGACGACGGTTCGTCCGACGCCTCCGCGGACATCGCGGCGCAGTGCGGCAGCC TCGATTCGCGCGTGTGTCTGCTGCGAATGCCATACAACGGCGGCGCGGCGCGTGCGCGCAACTGGGCTGCGATGCACGCG TCGCACGACCTGCTCGCCTTTCTCGACGCCGACGACGAATACCTGCCCGGCGCCCTCGGCGCGGCGAGCGCGTTCCTCGC GCAACATCCCGACGAAGTGTCCGTGCGGCTCGACGTCGAGTACACGGATTTTCCCCGCGAGCTCACCGCTCATCCCGACT TCGCCGCGCATGCGGCAACGCTCAGCAACACCGTGCCGAGCAGCCTGCTGATTCGCCGTACGGCTTTTCTCGCGCTCGGC GGCTTTCCGATGGACGACGCGTTCCGCCGCATTGGCGGCGAGGACGGCGCGTTTTCCTGGGCGCTGCGCGACATCTTCGG CAATCCGCGCCTGGAAGATGCGAAGCGCGTGCGCATGCATTACCACGCAGGCATCCACGCGGAGCGCTACTTTCGCATCG CGCTCGGCCTGCAGGCCGCCGACCCCGACGATACAGCCGATGCGTTTCGCTTCTCCCGGCAGTTCCTCGATATGGCGCGT GCGGGGATCGCGCAATTGCGCGCGGCAAAAGTGATGGTTCAGGTTCCGGCACAAAACGCACCGGCCGCGCCAGGGAGTCT TCCATAA
Upstream 100 bases:
>100_bases TCGCCGAAAGCGCCCCACCCATTTCAAGATGCGCCTGGCGGCAAGCGGAATAACATCGTCGGTTCTTCACCGTTGACCCG CCCCGCGCGCCCGTTCATTC
Downstream 100 bases:
>100_bases GCCTGGGCGGCGGCCGCATCGGAGCAGGCCGCGCCGGTTCTCCTCATACTCGCAGGCCGGCAAATACGAACCCGAACCGC GCCCCGAAGCCATCTCGATT
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCLLRMPYNGGAARARNWAAMHA SHDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVEYTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALG GFPMDDAFRRIGGEDGAFSWALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMAR AGIAQLRAAKVMVQVPAQNAPAAPGSLP
Sequences:
>Translated_268_residues MTPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCLLRMPYNGGAARARNWAAMHA SHDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVEYTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALG GFPMDDAFRRIGGEDGAFSWALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMAR AGIAQLRAAKVMVQVPAQNAPAAPGSLP >Mature_267_residues TPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCLLRMPYNGGAARARNWAAMHAS HDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVEYTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALGG FPMDDAFRRIGGEDGAFSWALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMARA GIAQLRAAKVMVQVPAQNAPAAPGSLP
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the sixth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fifth and sixth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 28861; Mature: 28730
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCL CCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEE LRMPYNGGAARARNWAAMHASHDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVE EEECCCCCCHHHCCCHHEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEE YTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALGGFPMDDAFRRIGGEDGAFSW ECCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH ALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMAR HHHHHHCCCCCCHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH AGIAQLRAAKVMVQVPAQNAPAAPGSLP HHHHHHHHHEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TPISIIIPCYNGAATLVRALQSCRIQPEAAQIIVVDDGSSDASADIAAQCGSLDSRVCL CCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEE LRMPYNGGAARARNWAAMHASHDLLAFLDADDEYLPGALGAASAFLAQHPDEVSVRLDVE EEECCCCCCHHHCCCHHEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEE YTDFPRELTAHPDFAAHAATLSNTVPSSLLIRRTAFLALGGFPMDDAFRRIGGEDGAFSW ECCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH ALRDIFGNPRLEDAKRVRMHYHAGIHAERYFRIALGLQAADPDDTADAFRFSRQFLDMAR HHHHHHCCCCCCHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH AGIAQLRAAKVMVQVPAQNAPAAPGSLP HHHHHHHHHEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8118055; 11481431 [H]