| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ahcY [H]
Identifier: 91785599
GI number: 91785599
Start: 4655967
End: 4657388
Strand: Reverse
Name: ahcY [H]
Synonym: Bxe_A0178
Alternate gene names: 91785599
Gene position: 4657388-4655967 (Counterclockwise)
Preceding gene: 91785600
Following gene: 91785598
Centisome position: 95.13
GC content: 61.25
Gene sequence:
>1422_bases ATGAACGCCGCAGTTATCGATTCCAAAAATTCCCAGGATTTCATTGTTGCCGACATGTCGCTTGCCGACTGGGGCCGCAA GGAACTGAACATCGCCGAGACGGAAATGCCCGGCCTCGTGCAAACGCGTGAAGAGTACAAGGTGCAGCAGCCGCTGAAGG GCGCGCGCATCGCAGGTTCGCTGCACATGACGATCCAGACCGGCGTGCTGATCGAGACGCTGACGGCGCTCGGCGCCGAC GTGCGCTGGGCCTCGTGCAACATCTTCTCGACCCAGGATCATGCCGCCGCGGCAATCGCCAAGGCCGGCACGCCGGTGTT CGCATTCAAGGGCGAATCGCTCGACGAATACTGGGAGTTCTCGCACCGCATTTTCGAATGGCCGAACGGCGAGTTCGCCA ACATGATCCTCGACGACGGCGGCGACGCCACGTTGCTGCTGATCCTCGGCTCGAAGGCCGAGAAAGACCGTTCGGTGATC TCGAAGCCGACCAACGAGGAAGAAGTCGCGCTGTACAAGTCGATCGAGCGCCATCTGGACGCCGACCCGACGTGGTACTC CACGCGCCTTGCGCACATCAAGGGCGTGACCGAAGAAACCACGACCGGCGTGCACCGTCTGTATCAGATGGAAAAAGAAG GCCGCCTGCCGTTCCCTGCGATCAACGTCAACGACTCGGTCACCAAGTCGAAGTTCGACAACCTGTATGGCTGCCGTGAG TCGCTGGTCGACGGCATCAAGCGCGCGACCGACGTGATGATCGCGGGCAAGATCGCCGTGGTCGCCGGTTACGGCGACGT GGGCAAGGGCTGCGCGCAATCGCTGCGCGGTTTGGGCGCCACCGTGTGGGTCACCGAAATCGATCCGATCTGCGCATTGC AGGCGGCGATGGAAGGCTACCGCGTCGTGACGATGGAATACGCGGCGGACAAGGCCGACATCTTCGTGACGGCGACCGGC AACTACCACGTGATCGGCCACGACCACATGAAGGCGATGCGTCACAACGCGATTGTCTGCAACATCGGTCACTTCGACTC GGAAATCGACGTTGCGTCGACCCGTCAGTACCAGTGGGACAACATCAAGCCGCAAGTCGACCACATCATTTTCCCGGACG GCAAGCGCGTGATCCTGCTGGCTGAAGGCCGCCTCGTGAATCTGGGTTGCGCGACGGGCCACCCGTCGTTCGTGATGTCG AACTCGTTCACGAACCAGACGCTCGCGCAGATCGAACTGTTCACGCAAGGCAACAAGTACGAGAACAAGGTGTACGTGCT GCCGAAGCATCTGGACGAAAAGGTCGCACGCCTGCATCTGGCGCGCATCGGCGCGAACCTGACCGTGCTGTCGGACGAGC AGGCCGGCTACATCGGCGTCGACAAGAACGGCCCGTTCAAGCCGAACCACTACCGCTATTAA
Upstream 100 bases:
>100_bases TTCAATCGGAGGGCCCGGATGCGCATAGCGCTTTCCCATCCACCGCATCGAACCGCGCTCACGTCAAATTTCTAGTCAAT TTCTTAGAAAGGAGGGCGTG
Downstream 100 bases:
>100_bases GCGCGCCGCGAGCGGTTGAGCAGCATGACAGTTTGACGACAGGGCGGCGCATCATGCGCCGCTTTGTTCGCCATGACCGC CTCCGCCCGTTCTGTACGCG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MNAAVIDSKNSQDFIVADMSLADWGRKELNIAETEMPGLVQTREEYKVQQPLKGARIAGSLHMTIQTGVLIETLTALGAD VRWASCNIFSTQDHAAAAIAKAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVI SKPTNEEEVALYKSIERHLDADPTWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATG NYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWDNIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMS NSFTNQTLAQIELFTQGNKYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY
Sequences:
>Translated_473_residues MNAAVIDSKNSQDFIVADMSLADWGRKELNIAETEMPGLVQTREEYKVQQPLKGARIAGSLHMTIQTGVLIETLTALGAD VRWASCNIFSTQDHAAAAIAKAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVI SKPTNEEEVALYKSIERHLDADPTWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATG NYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWDNIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMS NSFTNQTLAQIELFTQGNKYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY >Mature_473_residues MNAAVIDSKNSQDFIVADMSLADWGRKELNIAETEMPGLVQTREEYKVQQPLKGARIAGSLHMTIQTGVLIETLTALGAD VRWASCNIFSTQDHAAAAIAKAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVI SKPTNEEEVALYKSIERHLDADPTWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATG NYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWDNIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMS NSFTNQTLAQIELFTQGNKYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=462, Percent_Identity=59.7402597402597, Blast_Score=521, Evalue=1e-148, Organism=Homo sapiens, GI239937451, Length=440, Percent_Identity=59.5454545454545, Blast_Score=494, Evalue=1e-139, Organism=Homo sapiens, GI298286489, Length=470, Percent_Identity=50.6382978723404, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI24308043, Length=470, Percent_Identity=50.6382978723404, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI195539337, Length=470, Percent_Identity=50.6382978723404, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI195539349, Length=470, Percent_Identity=50.6382978723404, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI21361647, Length=470, Percent_Identity=50.4255319148936, Blast_Score=462, Evalue=1e-130, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=60, Blast_Score=530, Evalue=1e-151, Organism=Saccharomyces cerevisiae, GI6320882, Length=483, Percent_Identity=57.5569358178054, Blast_Score=511, Evalue=1e-146, Organism=Drosophila melanogaster, GI24642172, Length=462, Percent_Identity=60.3896103896104, Blast_Score=533, Evalue=1e-152, Organism=Drosophila melanogaster, GI24656245, Length=471, Percent_Identity=50.3184713375796, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI45553387, Length=469, Percent_Identity=49.8933901918977, Blast_Score=449, Evalue=1e-126, Organism=Drosophila melanogaster, GI45553385, Length=468, Percent_Identity=49.7863247863248, Blast_Score=446, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 52310; Mature: 52310
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAVIDSKNSQDFIVADMSLADWGRKELNIAETEMPGLVQTREEYKVQQPLKGARIAGS CCCEEECCCCCCCEEEEECCHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCEEECE LHMTIQTGVLIETLTALGADVRWASCNIFSTQDHAAAAIAKAGTPVFAFKGESLDEYWEF EEEEEECCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCHHHHHHH SHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVISKPTNEEEVALYKSIERHLD HHHEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHCC ADPTWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHH SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGY HHHHHHHHHHHEEEECEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCE RVVTMEYAADKADIFVTATGNYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWD EEEEEEECCCCCCEEEEECCCEEEEEHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECC NIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTQGNKY CCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCCCCCEEEEEEEEECCCCC ENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY CCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MNAAVIDSKNSQDFIVADMSLADWGRKELNIAETEMPGLVQTREEYKVQQPLKGARIAGS CCCEEECCCCCCCEEEEECCHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCEEECE LHMTIQTGVLIETLTALGADVRWASCNIFSTQDHAAAAIAKAGTPVFAFKGESLDEYWEF EEEEEECCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCHHHHHHH SHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVISKPTNEEEVALYKSIERHLD HHHEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHCC ADPTWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHH SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGY HHHHHHHHHHHEEEECEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCE RVVTMEYAADKADIFVTATGNYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWD EEEEEEECCCCCCEEEEECCCEEEEEHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECC NIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTQGNKY CCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCCCCCEEEEEEEEECCCCC ENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY CCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA