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The map label for this gene is yiaD [C]

Identifier: 91785602

GI number: 91785602

Start: 4659753

End: 4661507

Strand: Reverse

Name: yiaD [C]

Synonym: Bxe_A0175

Alternate gene names: 91785602

Gene position: 4661507-4659753 (Counterclockwise)

Preceding gene: 91785603

Following gene: 91785600

Centisome position: 95.21

GC content: 66.61

Gene sequence:

>1755_bases
ATGAGCATCAATACGATTCAATTGATTCAGTCCGCATTGACGGACAGTGTCGTGCGCCAACTGGCGGAGCGCTTCGGGCT
CCCGTCGGAGGCGACACGCAAGGTGTTGGCGACCGTGGCTCCGGCGCTCGTCGCCAGCCTGATGCAGAAGGGCGCGACGC
TCGACGGCGCGCGTTCGCTGTTCGGCACGATTCTCTCGCCGGAGGTCAACAGTCATATTGGCGAACAGCTGCCGCAACTG
CTCGGCAGCACGGGTGGCGTAAGCCGGCTGGAAATTGCCGGGCGGCATCTGCTCGAGCGCGCGCTGGACCGCGGCGTCGA
CGGGCTGAGCGATGAAGTCGCCGTGCAGACCGGCGTGCCGGCTCATGCCACCCATGCCATGACGGGCATTGCCGGTGCGA
CCTTGCTGGGCCTGCTCAAGCGGCATTTTCTCGAAGGGCAGGGCAACGCCGGGCAATTGCCGACGCTGCTCGGCCATCAA
TTGCCGGTCATTGCGCCTTACCTGAACGACCGTTTGATGACCGCGCTCGGACTGAGCGGGCTCGGCGCGTTCTCCGCCAA
CATTCTGTCGCAGTTGAAGGCCGTTTCGGCGCATATCGACCACCCGACACCCGCGTCCACGCCGGTGGCCGAGGCCTTGT
CGAAGATCCACGTGCCGGCGGACGCCGTGATGCGCGAAGAGCGCCGTTCGCACAAGTGGCTCTGGTGGCTGCTCGCGGCT
CTTGCAGCGCTGCTGGCTTTTCTGTTTCTGCGTAGCTGCCAGAGCGAGCAAAACGCCAATCGCGCTGCCGGACAAGGCAG
TTCCGCGGGAGCCGTCGCCGCGCAGCCCGCCTCTGCGCCGGTCCGCGCTTCGGACGCAGCAGTAGCCGCGAGCGAGGTGG
CGGCGTCCGCGCCCGCAGCCAGCGCCGCGGCCTCCGCGAGTGCGGCGAGCGCCGTACAGCCGGCCGCCGCCGCGCCCGCG
CCGACCAAAGACAGCCAGCTCAGCTTTACGGTGGACGCCGCCGGCAAGCCGACGGTCACCGCCACGGTCGGCAGTGAAGC
CGAAAAGACGCAACTGATCGAAGAGCTGACCAGGCGCCTCGGGCAATACAACTTCGTGCCGAACATCACGGTCGATCCGG
CCACGAAGCCGGCCGACTGGCTGCTCCATCTCGACGGCCTGCTGCCGCTGATGTCGCTGCCCGGCGCGGAAGTGAAAGTG
GACGGCACGCACATCGAGCTCAGCGGCACCGCGGCGGACAAGAAACTCGGCTGGCTCGACAAACTGAAGTCGCTGTTCGG
CGCGTCGTATCAGATCGGTTCGTTCGACGTCGCGCATGCCGTTGCCGATGCTACCGAGAATTTCCGCAGCGCGGTCAAGG
GCCTGCTTGGGGCGGACAGCTCATGCGCGGTGGCGGACGTGGTCAAGGTGCTGAACCTGCAGGTGATCAACTTCGCGAGC
GCGAGCGCGCGTGTACCGGCTTCGGCGGTGGAAGATCTGAACCAGTCGGCGCACGTGCTGAACGCCTGCGCGGGCAACGG
CAAGACGGCCCGGCTCGAAGTGGCCGGCTATTCGGACAACGTGGGTGGCGAAGCAGCCAATCTGCAACTGTCGAAGCAGC
GTGCCGAAGCGGTGCGCGCCTACCTCGTCAGGACCGGCGTGCCGGCTGATTCGCTGATCGCGCAAGGTTACGGGGACGCG
CGTCCGGTTGCGAGCAACGACACGGCGAGCGGTCGCTTTGCCAATCGCCGCATCGAGTTCGTCGCGCAGCAGTAA

Upstream 100 bases:

>100_bases
AATTGTGCCGCTTCGTTTATGAGATTCCCCGAAACCTATAATCGCGCCGCGAAAAAGAGCGGGTCAGGTGGCGCGTTCGG
GAACTCAAGGAAGCGAAGCG

Downstream 100 bases:

>100_bases
TTGCAGCTTCGATAAGCCATGCAAGACGTGCCCCCGGCGTTTGCCGGGGGCATTCGTCATTTGGCGGGCGGGACCGGGAA
CGGCGTTGTGATACCGGCCA

Product: OmpA/MotB family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSINTIQLIQSALTDSVVRQLAERFGLPSEATRKVLATVAPALVASLMQKGATLDGARSLFGTILSPEVNSHIGEQLPQL
LGSTGGVSRLEIAGRHLLERALDRGVDGLSDEVAVQTGVPAHATHAMTGIAGATLLGLLKRHFLEGQGNAGQLPTLLGHQ
LPVIAPYLNDRLMTALGLSGLGAFSANILSQLKAVSAHIDHPTPASTPVAEALSKIHVPADAVMREERRSHKWLWWLLAA
LAALLAFLFLRSCQSEQNANRAAGQGSSAGAVAAQPASAPVRASDAAVAASEVAASAPAASAAASASAASAVQPAAAAPA
PTKDSQLSFTVDAAGKPTVTATVGSEAEKTQLIEELTRRLGQYNFVPNITVDPATKPADWLLHLDGLLPLMSLPGAEVKV
DGTHIELSGTAADKKLGWLDKLKSLFGASYQIGSFDVAHAVADATENFRSAVKGLLGADSSCAVADVVKVLNLQVINFAS
ASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEAANLQLSKQRAEAVRAYLVRTGVPADSLIAQGYGDA
RPVASNDTASGRFANRRIEFVAQQ

Sequences:

>Translated_584_residues
MSINTIQLIQSALTDSVVRQLAERFGLPSEATRKVLATVAPALVASLMQKGATLDGARSLFGTILSPEVNSHIGEQLPQL
LGSTGGVSRLEIAGRHLLERALDRGVDGLSDEVAVQTGVPAHATHAMTGIAGATLLGLLKRHFLEGQGNAGQLPTLLGHQ
LPVIAPYLNDRLMTALGLSGLGAFSANILSQLKAVSAHIDHPTPASTPVAEALSKIHVPADAVMREERRSHKWLWWLLAA
LAALLAFLFLRSCQSEQNANRAAGQGSSAGAVAAQPASAPVRASDAAVAASEVAASAPAASAAASASAASAVQPAAAAPA
PTKDSQLSFTVDAAGKPTVTATVGSEAEKTQLIEELTRRLGQYNFVPNITVDPATKPADWLLHLDGLLPLMSLPGAEVKV
DGTHIELSGTAADKKLGWLDKLKSLFGASYQIGSFDVAHAVADATENFRSAVKGLLGADSSCAVADVVKVLNLQVINFAS
ASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEAANLQLSKQRAEAVRAYLVRTGVPADSLIAQGYGDA
RPVASNDTASGRFANRRIEFVAQQ
>Mature_583_residues
SINTIQLIQSALTDSVVRQLAERFGLPSEATRKVLATVAPALVASLMQKGATLDGARSLFGTILSPEVNSHIGEQLPQLL
GSTGGVSRLEIAGRHLLERALDRGVDGLSDEVAVQTGVPAHATHAMTGIAGATLLGLLKRHFLEGQGNAGQLPTLLGHQL
PVIAPYLNDRLMTALGLSGLGAFSANILSQLKAVSAHIDHPTPASTPVAEALSKIHVPADAVMREERRSHKWLWWLLAAL
AALLAFLFLRSCQSEQNANRAAGQGSSAGAVAAQPASAPVRASDAAVAASEVAASAPAASAAASASAASAVQPAAAAPAP
TKDSQLSFTVDAAGKPTVTATVGSEAEKTQLIEELTRRLGQYNFVPNITVDPATKPADWLLHLDGLLPLMSLPGAEVKVD
GTHIELSGTAADKKLGWLDKLKSLFGASYQIGSFDVAHAVADATENFRSAVKGLLGADSSCAVADVVKVLNLQVINFASA
SARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEAANLQLSKQRAEAVRAYLVRTGVPADSLIAQGYGDAR
PVASNDTASGRFANRRIEFVAQQ

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=112, Percent_Identity=40.1785714285714, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 60277; Mature: 60146

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINTIQLIQSALTDSVVRQLAERFGLPSEATRKVLATVAPALVASLMQKGATLDGARSL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FGTILSPEVNSHIGEQLPQLLGSTGGVSRLEIAGRHLLERALDRGVDGLSDEVAVQTGVP
HHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
AHATHAMTGIAGATLLGLLKRHFLEGQGNAGQLPTLLGHQLPVIAPYLNDRLMTALGLSG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHCC
LGAFSANILSQLKAVSAHIDHPTPASTPVAEALSKIHVPADAVMREERRSHKWLWWLLAA
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAALLAFLFLRSCQSEQNANRAAGQGSSAGAVAAQPASAPVRASDAAVAASEVAASAPAA
HHHHHHHHHHHHHCCHHCCHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCH
SAAASASAASAVQPAAAAPAPTKDSQLSFTVDAAGKPTVTATVGSEAEKTQLIEELTRRL
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHH
GQYNFVPNITVDPATKPADWLLHLDGLLPLMSLPGAEVKVDGTHIELSGTAADKKLGWLD
CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHH
KLKSLFGASYQIGSFDVAHAVADATENFRSAVKGLLGADSSCAVADVVKVLNLQVINFAS
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECC
ASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEAANLQLSKQRAEAVRA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHCHHHHHHHHHHHHH
YLVRTGVPADSLIAQGYGDARPVASNDTASGRFANRRIEFVAQQ
HHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEECC
>Mature Secondary Structure 
SINTIQLIQSALTDSVVRQLAERFGLPSEATRKVLATVAPALVASLMQKGATLDGARSL
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FGTILSPEVNSHIGEQLPQLLGSTGGVSRLEIAGRHLLERALDRGVDGLSDEVAVQTGVP
HHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
AHATHAMTGIAGATLLGLLKRHFLEGQGNAGQLPTLLGHQLPVIAPYLNDRLMTALGLSG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHCC
LGAFSANILSQLKAVSAHIDHPTPASTPVAEALSKIHVPADAVMREERRSHKWLWWLLAA
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAALLAFLFLRSCQSEQNANRAAGQGSSAGAVAAQPASAPVRASDAAVAASEVAASAPAA
HHHHHHHHHHHHHCCHHCCHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCH
SAAASASAASAVQPAAAAPAPTKDSQLSFTVDAAGKPTVTATVGSEAEKTQLIEELTRRL
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHH
GQYNFVPNITVDPATKPADWLLHLDGLLPLMSLPGAEVKVDGTHIELSGTAADKKLGWLD
CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHH
KLKSLFGASYQIGSFDVAHAVADATENFRSAVKGLLGADSSCAVADVVKVLNLQVINFAS
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECC
ASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEAANLQLSKQRAEAVRA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHCHHHHHHHHHHHHH
YLVRTGVPADSLIAQGYGDARPVASNDTASGRFANRRIEFVAQQ
HHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]