| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hisD [H]
Identifier: 91785381
GI number: 91785381
Start: 4438568
End: 4439890
Strand: Reverse
Name: hisD [H]
Synonym: Bxe_A0398
Alternate gene names: 91785381
Gene position: 4439890-4438568 (Counterclockwise)
Preceding gene: 91785382
Following gene: 91785380
Centisome position: 90.69
GC content: 66.36
Gene sequence:
>1323_bases ATGTCTATCAAGATTCGCAAACTCGATTCCACCGCTCCCGACTTCCAGAAGTCGCTGCACGCGGTGCTCGCGTTCGAGGC GAGCGAAGACGAAGCAATCGAGCGCTCGGTCGCGCAGATTCTGAACGACGTGAAGGCGCGCGGCGATGCTGCGGTGCTGG AGTACACGAGCCGCTTCGACCGTGTCGAGGCGAAGAGCGTCGACGCGCTCGAACTGCCGATGTCGGAGCTGGAAGCGGCG CTGGAAGGCCTCGAACCGAAGCGTCGCGCGGCGCTCGAAGCGGCGGCGGCGCGGGTGCGCGGCTACCACGAGAAGCAGAA GATCGAATGCGGCAGCCATAGCTGGCGGTACACGGAAGCCGACGGCACCGTGCTCGGCCAGAAGGTCACGCCGCTCGATC GCGCGGGTATCTACGTGCCGGGCGGCAAGGCGGCGTATCCGTCGTCAGTGCTGATGAACGCGATTCCGGCGCGAGTGGCC GGCGTGCGCGAAATCGTCATGGTGGTGCCGACGCCGGACGGCGTGAAGAATCCGCTGGTGCTCGCGGCCGCGCTGCTCGG CGGCGTGGATCGCGTGTTCACGATTGGCGGCGCGCAGGCGGTGGGCGCGCTGGCGTACGGCACGGCGACCATTCCCGCGG TCGACAAGATCTGCGGTCCGGGCAACGCGTACGTCGCGTCGGCCAAGCGCCGCGTGTTCGGCACGGTCGGTATCGACATG ATCGCCGGGCCGTCCGAAATCCTGGTGCTGTGCGACGGCACCACGGATCCGCGCTGGGTGGCGATGGACCTGTTCTCGCA GGCCGAGCACGACGAGCTCGCGCAGTCCATTCTGCTGTGCCCGGACGACGCGTTCATCGGCCGCGTGAAAGATGCGATCG ACGAACTGCTGCCCACCATGCCGCGCCGCGATGTGATCAGCGCGTCGCTGGAAGGCCGCGGCGCGTTGATCAAGGTGCGC GATATGGCGGAAGCCTGCGCGATCGCCAACGACATCGCTCCGGAACACCTCGAAATTTCCGCGCTGGAACCGCAGCAGTG GGGCCAGCTGATCCGCCATGCCGGTGCGATCTTTCTCGGCCGCTACACCAGCGAAAGCCTCGGCGACTACTGTGCGGGGC CAAATCACGTTTTGCCTACGTCTCGTACCGCACGGTTCTCGTCTCCTTTGGGCGTCTATGATTTCTTCAAGCGTTCGAGC GTGATCGAGGTCAGCGCGGAGGGCGCGCAGACGCTGGGCGAGATCGCCGCCGAACTCGCTTACGGCGAAGGCCTGCAGGC GCATGCCCGCAGCGCCGAATACCGGATGCGGCAAAACGGCTGA
Upstream 100 bases:
>100_bases TCGACGCGTTCGAACGTGCGTCGAAAGCCGGCTCCACGACGGCCTGATCGCGTCGGTGCGAACATGCAGTAACGAGCGCC TTACCGGAACGGATACCCGT
Downstream 100 bases:
>100_bases GTGCGTCGGGTCCGACGCCGAGGCCGAGCGGGCATCGAGCCGATGCCCTCGAACGCCGGCGACGGATTGCGTGCGGTTCC ACGTTAAATACAGACAAGAC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSIKIRKLDSTAPDFQKSLHAVLAFEASEDEAIERSVAQILNDVKARGDAAVLEYTSRFDRVEAKSVDALELPMSELEAA LEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWRYTEADGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAIPARVA GVREIVMVVPTPDGVKNPLVLAAALLGGVDRVFTIGGAQAVGALAYGTATIPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDAFIGRVKDAIDELLPTMPRRDVISASLEGRGALIKVR DMAEACAIANDIAPEHLEISALEPQQWGQLIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSS VIEVSAEGAQTLGEIAAELAYGEGLQAHARSAEYRMRQNG
Sequences:
>Translated_440_residues MSIKIRKLDSTAPDFQKSLHAVLAFEASEDEAIERSVAQILNDVKARGDAAVLEYTSRFDRVEAKSVDALELPMSELEAA LEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWRYTEADGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAIPARVA GVREIVMVVPTPDGVKNPLVLAAALLGGVDRVFTIGGAQAVGALAYGTATIPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDAFIGRVKDAIDELLPTMPRRDVISASLEGRGALIKVR DMAEACAIANDIAPEHLEISALEPQQWGQLIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSS VIEVSAEGAQTLGEIAAELAYGEGLQAHARSAEYRMRQNG >Mature_439_residues SIKIRKLDSTAPDFQKSLHAVLAFEASEDEAIERSVAQILNDVKARGDAAVLEYTSRFDRVEAKSVDALELPMSELEAAL EGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWRYTEADGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAIPARVAG VREIVMVVPTPDGVKNPLVLAAALLGGVDRVFTIGGAQAVGALAYGTATIPAVDKICGPGNAYVASAKRRVFGTVGIDMI AGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDAFIGRVKDAIDELLPTMPRRDVISASLEGRGALIKVRD MAEACAIANDIAPEHLEISALEPQQWGQLIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSV IEVSAEGAQTLGEIAAELAYGEGLQAHARSAEYRMRQNG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=414, Percent_Identity=41.0628019323672, Blast_Score=278, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6319819, Length=412, Percent_Identity=36.1650485436893, Blast_Score=239, Evalue=9e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47055; Mature: 46924
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKIRKLDSTAPDFQKSLHAVLAFEASEDEAIERSVAQILNDVKARGDAAVLEYTSRFD CCEEEEECCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RVEAKSVDALELPMSELEAALEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWRYTEA HHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAIPARVAGVREIVMVVPTPDGVKNPLV CCCEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHH LAAALLGGVDRVFTIGGAQAVGALAYGTATIPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCCHHEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDAFIGRVKDAIDELLPTM ECCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC PRRDVISASLEGRGALIKVRDMAEACAIANDIAPEHLEISALEPQQWGQLIRHAGAIFLG CCCHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSVIEVSAEGAQTLGEIAAELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHH YGEGLQAHARSAEYRMRQNG HCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SIKIRKLDSTAPDFQKSLHAVLAFEASEDEAIERSVAQILNDVKARGDAAVLEYTSRFD CEEEEECCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RVEAKSVDALELPMSELEAALEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWRYTEA HHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRAGIYVPGGKAAYPSSVLMNAIPARVAGVREIVMVVPTPDGVKNPLV CCCEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHH LAAALLGGVDRVFTIGGAQAVGALAYGTATIPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCCHHEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPRWVAMDLFSQAEHDELAQSILLCPDDAFIGRVKDAIDELLPTM ECCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC PRRDVISASLEGRGALIKVRDMAEACAIANDIAPEHLEISALEPQQWGQLIRHAGAIFLG CCCHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSVIEVSAEGAQTLGEIAAELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHH YGEGLQAHARSAEYRMRQNG HCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA