| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is gntK [H]
Identifier: 91785187
GI number: 91785187
Start: 4221918
End: 4222415
Strand: Reverse
Name: gntK [H]
Synonym: Bxe_A0592
Alternate gene names: 91785187
Gene position: 4222415-4221918 (Counterclockwise)
Preceding gene: 91785188
Following gene: 91785184
Centisome position: 86.25
GC content: 61.65
Gene sequence:
>498_bases ATGATTCTGATCGCAATGGGCGTGTCGGGCGCCGGCAAGACGAGAATTGGCGAAATGCTGGCGGAGCGCCTGCACTGCGC GTTCACCGACGGCGACGCATTTCACAGCGCCGCCAACAAGGAGAAAATGCACCACGGCATTCCGCTGACGGATGAAGACC GCTGGCCCTGGCTGAAAACGATCCGCGCGGCGATTGAGGAGAAGCAGACGGCGGGCGAGACGGCGGTGTTCACGTGTTCG TCGCTGAAGCGCTCGTATCGCGACGTTCTGCGCGACGGCGACAAGGACGTGTGCTTCGTCTACCTCAAGGGTTCGCGTGA GGTGCTGGAGCAGCGCCTGACCACGCGCACCGGCCATTTTTTCGATCCGTCGCTGCTGCAAAGCCAGCTCGATACGCTCG AAGAACCGGGCGCCGATGAGGCGATCACGGTAAGCATCGAACTGTCGCCGGAAGAGATCGTCGACAGCGTGCTGATTCAG GTCGAAGCGCGTAAGTGA
Upstream 100 bases:
>100_bases GGGCAGACCTTCAAGACATGGTCGCTCCTCGAAACCATCATCTCGCTGATGGGTCTGGGTTTGACCTTCGCACTCGCGAC GGTCGTGTAAGGAGTTTTTG
Downstream 100 bases:
>100_bases GTTTGCCTGGTTGCAGGTAGATAGATGTAAAAAAACCGCTTCTCGGAGCGGTTTTTTCATGCCTGGTGCAACAGGCGGGC AACAGGCGGCCAACAACCGA
Product: gluconate kinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MILIAMGVSGAGKTRIGEMLAERLHCAFTDGDAFHSAANKEKMHHGIPLTDEDRWPWLKTIRAAIEEKQTAGETAVFTCS SLKRSYRDVLRDGDKDVCFVYLKGSREVLEQRLTTRTGHFFDPSLLQSQLDTLEEPGADEAITVSIELSPEEIVDSVLIQ VEARK
Sequences:
>Translated_165_residues MILIAMGVSGAGKTRIGEMLAERLHCAFTDGDAFHSAANKEKMHHGIPLTDEDRWPWLKTIRAAIEEKQTAGETAVFTCS SLKRSYRDVLRDGDKDVCFVYLKGSREVLEQRLTTRTGHFFDPSLLQSQLDTLEEPGADEAITVSIELSPEEIVDSVLIQ VEARK >Mature_165_residues MILIAMGVSGAGKTRIGEMLAERLHCAFTDGDAFHSAANKEKMHHGIPLTDEDRWPWLKTIRAAIEEKQTAGETAVFTCS SLKRSYRDVLRDGDKDVCFVYLKGSREVLEQRLTTRTGHFFDPSLLQSQLDTLEEPGADEAITVSIELSPEEIVDSVLIQ VEARK
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=175, Percent_Identity=39.4285714285714, Blast_Score=132, Evalue=2e-31, Organism=Escherichia coli, GI87082265, Length=159, Percent_Identity=44.6540880503145, Blast_Score=150, Evalue=6e-38, Organism=Escherichia coli, GI1790719, Length=147, Percent_Identity=46.9387755102041, Blast_Score=138, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25146487, Length=161, Percent_Identity=43.4782608695652, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6320454, Length=150, Percent_Identity=37.3333333333333, Blast_Score=101, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18406; Mature: 18406
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIAMGVSGAGKTRIGEMLAERLHCAFTDGDAFHSAANKEKMHHGIPLTDEDRWPWLKT CEEEEECCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IRAAIEEKQTAGETAVFTCSSLKRSYRDVLRDGDKDVCFVYLKGSREVLEQRLTTRTGHF HHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCC FDPSLLQSQLDTLEEPGADEAITVSIELSPEEIVDSVLIQVEARK CCHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHEEECCC >Mature Secondary Structure MILIAMGVSGAGKTRIGEMLAERLHCAFTDGDAFHSAANKEKMHHGIPLTDEDRWPWLKT CEEEEECCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IRAAIEEKQTAGETAVFTCSSLKRSYRDVLRDGDKDVCFVYLKGSREVLEQRLTTRTGHF HHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCC FDPSLLQSQLDTLEEPGADEAITVSIELSPEEIVDSVLIQVEARK CCHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]