| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is gnuT [H]
Identifier: 91785188
GI number: 91785188
Start: 4222426
End: 4223823
Strand: Reverse
Name: gnuT [H]
Synonym: Bxe_A0591
Alternate gene names: 91785188
Gene position: 4223823-4222426 (Counterclockwise)
Preceding gene: 91785189
Following gene: 91785187
Centisome position: 86.27
GC content: 62.66
Gene sequence:
>1398_bases ATGGAAGCTGTCCACGGCAGCATGCTGCTGGTCTTCGCGGCGATCGCCATCGCATTGCTGATCCTGCTGATCACGCGCTA CAAGGTTTACCCGTTCCTCGTTCTGATCATCGTGTCGCTGCTGCTGGGTCTCGCATCCGGCATGCCGATCGGCACCATCG TCAAATCGTTCGAAACGGGCAACGGCAATACGCTTGGCCACATCGCGATCGTGGTCGGCCTCGGCACGATGCTCGGCAAG ATGATGGCCGAATCCGGCGGCGCGGAGCGCATCGCCACCACGCTGATCGACTTCTTCGGCGAGAAGAACATCCACTGGGC GATGATGATCGTCGCGATCATCGTGGGCTTGCCGGTGTTCTTCGAAGTCGGCTTCGTGCTGCTGATTCCGATCGCTTTCA ACGTCGCGAAGCGCACCAACAAGTCGTTGCTGCTGGTCGGCTTGCCAATGGTCGCGGGTCTGTCCGTCGTGCACGGGCTG CTTCCGCCGCACCCGGCCGCGATGCTCGCGGTGCAGGCATATCACGCGGATATCGGCAGGACCATCGCCTATGGCCTGAT TGTCGGCGTGCCGACCGCGATCGTCGCGGGTCCGTTGTTTGCGTTGATGATCAGCCGCTATATCAAGCTGCCGAAAGACA ACGCGCTCGCCTCGCAATTTCTCGGCGCCGATGAAACCGGTGCGGCGAACAACGGCAACGGCGAGCAAAAGACCGCGCCC AGGCGCGAACTGCCGAGCTTCGGCGTGACGCTGTTCACGATCCTGTTGCCGGTTATCCTGATGCTGGTGGGCAGTTGGGC CGACCTCGTGTTCACGCCGAAGACCCTCGCGAACGATCTGCTGCGTTTCGTCGGCAATTCGGATGTGGCGCTGCTGGTCG CGGTGCTGGTCAGTTTCTGGACCTTTGGTGCGAGCCGTGGCTTCGATCGCGAGCAGATCCAGAAATTCTGCGGCGAATGT CTCGCGCCGATCGCGGGCATTACGCTGATTGTCGGCGCGGGCGGCGGCTTTGGGCGCGTGCTGATGGATAGCGGCATTTC GAAGGAGATCGTCAACGCGGCGACGTCGGCGCATCTGTCGCCGCTGCTGTTCGGCTGGCTGGTCGCGGCGCTGATTCGCC TGGCCACCGGCTCGGCGACGGTCGCGATGACCACCGCTTGCGGCATCGTCGCGCCGATCGCGGCGGCGGGCGCGGTGCAG GTGAAGCCGGAACTGCTGGTGCTGGCCACGGGTTCGGGCTCGCTGATCTTTTCGCACGTGAACGACGGCGGTTTCTGGCT GATCAAGGAATACTTCGGGATGACGGTGGGGCAGACCTTCAAGACATGGTCGCTCCTCGAAACCATCATCTCGCTGATGG GTCTGGGTTTGACCTTCGCACTCGCGACGGTCGTGTAA
Upstream 100 bases:
>100_bases GCGCGGTGAGCCCGGTTTCAGGGTGCCGCACAGGTCACCGTGAGACAAGGTGCTGACCGTGTTCCGCACTCAGAATCAAT AACGCAAAAGGAGGAGCTTC
Downstream 100 bases:
>100_bases GGAGTTTTTGATGATTCTGATCGCAATGGGCGTGTCGGGCGCCGGCAAGACGAGAATTGGCGAAATGCTGGCGGAGCGCC TGCACTGCGCGTTCACCGAC
Product: Na+/gluconate symporter, GntP
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MEAVHGSMLLVFAAIAIALLILLITRYKVYPFLVLIIVSLLLGLASGMPIGTIVKSFETGNGNTLGHIAIVVGLGTMLGK MMAESGGAERIATTLIDFFGEKNIHWAMMIVAIIVGLPVFFEVGFVLLIPIAFNVAKRTNKSLLLVGLPMVAGLSVVHGL LPPHPAAMLAVQAYHADIGRTIAYGLIVGVPTAIVAGPLFALMISRYIKLPKDNALASQFLGADETGAANNGNGEQKTAP RRELPSFGVTLFTILLPVILMLVGSWADLVFTPKTLANDLLRFVGNSDVALLVAVLVSFWTFGASRGFDREQIQKFCGEC LAPIAGITLIVGAGGGFGRVLMDSGISKEIVNAATSAHLSPLLFGWLVAALIRLATGSATVAMTTACGIVAPIAAAGAVQ VKPELLVLATGSGSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWSLLETIISLMGLGLTFALATVV
Sequences:
>Translated_465_residues MEAVHGSMLLVFAAIAIALLILLITRYKVYPFLVLIIVSLLLGLASGMPIGTIVKSFETGNGNTLGHIAIVVGLGTMLGK MMAESGGAERIATTLIDFFGEKNIHWAMMIVAIIVGLPVFFEVGFVLLIPIAFNVAKRTNKSLLLVGLPMVAGLSVVHGL LPPHPAAMLAVQAYHADIGRTIAYGLIVGVPTAIVAGPLFALMISRYIKLPKDNALASQFLGADETGAANNGNGEQKTAP RRELPSFGVTLFTILLPVILMLVGSWADLVFTPKTLANDLLRFVGNSDVALLVAVLVSFWTFGASRGFDREQIQKFCGEC LAPIAGITLIVGAGGGFGRVLMDSGISKEIVNAATSAHLSPLLFGWLVAALIRLATGSATVAMTTACGIVAPIAAAGAVQ VKPELLVLATGSGSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWSLLETIISLMGLGLTFALATVV >Mature_465_residues MEAVHGSMLLVFAAIAIALLILLITRYKVYPFLVLIIVSLLLGLASGMPIGTIVKSFETGNGNTLGHIAIVVGLGTMLGK MMAESGGAERIATTLIDFFGEKNIHWAMMIVAIIVGLPVFFEVGFVLLIPIAFNVAKRTNKSLLLVGLPMVAGLSVVHGL LPPHPAAMLAVQAYHADIGRTIAYGLIVGVPTAIVAGPLFALMISRYIKLPKDNALASQFLGADETGAANNGNGEQKTAP RRELPSFGVTLFTILLPVILMLVGSWADLVFTPKTLANDLLRFVGNSDVALLVAVLVSFWTFGASRGFDREQIQKFCGEC LAPIAGITLIVGAGGGFGRVLMDSGISKEIVNAATSAHLSPLLFGWLVAALIRLATGSATVAMTTACGIVAPIAAAGAVQ VKPELLVLATGSGSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWSLLETIISLMGLGLTFALATVV
Specific function: Part Of The Gluconate Utilization System Gnt-I; High- Affinity Intake Of Gluconate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=448, Percent_Identity=45.7589285714286, Blast_Score=367, Evalue=1e-103, Organism=Escherichia coli, GI1790716, Length=448, Percent_Identity=43.0803571428571, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI2367370, Length=430, Percent_Identity=39.7674418604651, Blast_Score=300, Evalue=1e-82, Organism=Escherichia coli, GI1788707, Length=456, Percent_Identity=38.1578947368421, Blast_Score=286, Evalue=3e-78, Organism=Escherichia coli, GI1790776, Length=444, Percent_Identity=35.1351351351351, Blast_Score=271, Evalue=6e-74, Organism=Escherichia coli, GI48994939, Length=450, Percent_Identity=35.5555555555556, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI1789097, Length=457, Percent_Identity=33.2603938730853, Blast_Score=229, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 48743; Mature: 48743
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAVHGSMLLVFAAIAIALLILLITRYKVYPFLVLIIVSLLLGLASGMPIGTIVKSFETG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC NGNTLGHIAIVVGLGTMLGKMMAESGGAERIATTLIDFFGEKNIHWAMMIVAIIVGLPVF CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FEVGFVLLIPIAFNVAKRTNKSLLLVGLPMVAGLSVVHGLLPPHPAAMLAVQAYHADIGR HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH TIAYGLIVGVPTAIVAGPLFALMISRYIKLPKDNALASQFLGADETGAANNGNGEQKTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC RRELPSFGVTLFTILLPVILMLVGSWADLVFTPKTLANDLLRFVGNSDVALLVAVLVSFW HHHCCCCHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHHHHHHHCCCCHHHHHHHHHHHH TFGASRGFDREQIQKFCGECLAPIAGITLIVGAGGGFGRVLMDSGISKEIVNAATSAHLS HHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHH PLLFGWLVAALIRLATGSATVAMTTACGIVAPIAAAGAVQVKPELLVLATGSGSLIFSHV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCEEEEEE NDGGFWLIKEYFGMTVGQTFKTWSLLETIISLMGLGLTFALATVV CCCCEEHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEAVHGSMLLVFAAIAIALLILLITRYKVYPFLVLIIVSLLLGLASGMPIGTIVKSFETG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC NGNTLGHIAIVVGLGTMLGKMMAESGGAERIATTLIDFFGEKNIHWAMMIVAIIVGLPVF CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FEVGFVLLIPIAFNVAKRTNKSLLLVGLPMVAGLSVVHGLLPPHPAAMLAVQAYHADIGR HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH TIAYGLIVGVPTAIVAGPLFALMISRYIKLPKDNALASQFLGADETGAANNGNGEQKTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC RRELPSFGVTLFTILLPVILMLVGSWADLVFTPKTLANDLLRFVGNSDVALLVAVLVSFW HHHCCCCHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHHHHHHHCCCCHHHHHHHHHHHH TFGASRGFDREQIQKFCGECLAPIAGITLIVGAGGGFGRVLMDSGISKEIVNAATSAHLS HHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHH PLLFGWLVAALIRLATGSATVAMTTACGIVAPIAAAGAVQVKPELLVLATGSGSLIFSHV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCEEEEEE NDGGFWLIKEYFGMTVGQTFKTWSLLETIISLMGLGLTFALATVV CCCCEEHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]