| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is purN [H]
Identifier: 91784971
GI number: 91784971
Start: 3982646
End: 3983257
Strand: Reverse
Name: purN [H]
Synonym: Bxe_A0809
Alternate gene names: 91784971
Gene position: 3983257-3982646 (Counterclockwise)
Preceding gene: 91784979
Following gene: 91784970
Centisome position: 81.36
GC content: 66.34
Gene sequence:
>612_bases ATGGAAGCCATTGTTCGAGCCCGCTCGGACGAAGCCTGGCCCGCGCAAGTCGCGGCCGTGATTGCCAACCGTCCTGATGC CGCGGGCCTTGCGTTCGCGGCGTCGCACGGCATTGCCACGGCGGTGGTCGACCACCGCCAGTTTTCCGGCCGCGACAGCT TCGACGCCGCGCTCGCTCAAAAAATCGACAGTTTCGCGCCCGATCTGGTGGTGCTCGCCGGCTTCATGCGGGTGCTCACG GCCGGTTTCGTCGATCACTACGCCGGCCGCATGCTGAATGTGCATCCGTCGCTGCTGCCGAGCTTTCCGGGCCTGAAAAC CCATCAGCAGGCGCTCGACGCGGGCGTGCGGCTGCACGGCGCGTCCGTGCATTTTGTCACCTCGCAGCTGGATCACGGGC CGATCGTCGTACAGTCGGCGGTTCCCGTTGAAACGGGCGACACTCCCGCCACGCTCGCCGAACGCGTGCTGGCAACCGAA CACATCATTTATCCACGCGCGGTGCGCTGGTTCGTCGAAGGGCGCCTTGCTCTCGAAGGCCTGCGTGTCACGCTTACGCC GCCGGAGCCGCAATGGCTCTTTGCCGGTCACACCGCCGGAGAGGGCGCATGA
Upstream 100 bases:
>100_bases AGCGCAATGGACGGCGGAGCGTCGCGGTTTCAGTGTCCCCGAATGATAAAATCCGCGGATGAAAAAACTCGTCATCCTGA TTTCCGGACGGGGAAGCAAC
Downstream 100 bases:
>100_bases GATTGCATGGTTTTCTGATTGGACAAACTGAGACTTTGTTGGCTGAAGTCCTAAAACTCAACGGCCCGGCCGACGCCACC ACGAGCCGTTTCTTCCGCGC
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEAIVRARSDEAWPAQVAAVIANRPDAAGLAFAASHGIATAVVDHRQFSGRDSFDAALAQKIDSFAPDLVVLAGFMRVLT AGFVDHYAGRMLNVHPSLLPSFPGLKTHQQALDAGVRLHGASVHFVTSQLDHGPIVVQSAVPVETGDTPATLAERVLATE HIIYPRAVRWFVEGRLALEGLRVTLTPPEPQWLFAGHTAGEGA
Sequences:
>Translated_203_residues MEAIVRARSDEAWPAQVAAVIANRPDAAGLAFAASHGIATAVVDHRQFSGRDSFDAALAQKIDSFAPDLVVLAGFMRVLT AGFVDHYAGRMLNVHPSLLPSFPGLKTHQQALDAGVRLHGASVHFVTSQLDHGPIVVQSAVPVETGDTPATLAERVLATE HIIYPRAVRWFVEGRLALEGLRVTLTPPEPQWLFAGHTAGEGA >Mature_203_residues MEAIVRARSDEAWPAQVAAVIANRPDAAGLAFAASHGIATAVVDHRQFSGRDSFDAALAQKIDSFAPDLVVLAGFMRVLT AGFVDHYAGRMLNVHPSLLPSFPGLKTHQQALDAGVRLHGASVHFVTSQLDHGPIVVQSAVPVETGDTPATLAERVLATE HIIYPRAVRWFVEGRLALEGLRVTLTPPEPQWLFAGHTAGEGA
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=178, Percent_Identity=44.3820224719101, Blast_Score=164, Evalue=7e-41, Organism=Homo sapiens, GI209869995, Length=178, Percent_Identity=44.3820224719101, Blast_Score=164, Evalue=7e-41, Organism=Homo sapiens, GI209869993, Length=178, Percent_Identity=44.3820224719101, Blast_Score=164, Evalue=7e-41, Organism=Escherichia coli, GI1788846, Length=178, Percent_Identity=49.438202247191, Blast_Score=183, Evalue=6e-48, Organism=Escherichia coli, GI1787483, Length=170, Percent_Identity=32.9411764705882, Blast_Score=97, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17567511, Length=152, Percent_Identity=42.1052631578947, Blast_Score=129, Evalue=8e-31, Organism=Drosophila melanogaster, GI24582400, Length=176, Percent_Identity=42.0454545454545, Blast_Score=146, Evalue=9e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 21636; Mature: 21636
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAIVRARSDEAWPAQVAAVIANRPDAAGLAFAASHGIATAVVDHRQFSGRDSFDAALAQ CCCHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCHHEEHHHHHHCCCCCHHHHHHHH KIDSFAPDLVVLAGFMRVLTAGFVDHYAGRMLNVHPSLLPSFPGLKTHQQALDAGVRLHG HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCHHHHHHHHCCEEEEC ASVHFVTSQLDHGPIVVQSAVPVETGDTPATLAERVLATEHIIYPRAVRWFVEGRLALEG CEEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC LRVTLTPPEPQWLFAGHTAGEGA EEEEECCCCCCEEEECCCCCCCC >Mature Secondary Structure MEAIVRARSDEAWPAQVAAVIANRPDAAGLAFAASHGIATAVVDHRQFSGRDSFDAALAQ CCCHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCHHEEHHHHHHCCCCCHHHHHHHH KIDSFAPDLVVLAGFMRVLTAGFVDHYAGRMLNVHPSLLPSFPGLKTHQQALDAGVRLHG HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCHHHHHHHHCCEEEEC ASVHFVTSQLDHGPIVVQSAVPVETGDTPATLAERVLATEHIIYPRAVRWFVEGRLALEG CEEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC LRVTLTPPEPQWLFAGHTAGEGA EEEEECCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301838; 9205837; 9278503; 10954745; 2204419; 1522592; 1631098; 9698564; 10606510 [H]