| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is sbp [H]
Identifier: 91783349
GI number: 91783349
Start: 2193007
End: 2194047
Strand: Direct
Name: sbp [H]
Synonym: Bxe_A2470
Alternate gene names: 91783349
Gene position: 2193007-2194047 (Clockwise)
Preceding gene: 91783345
Following gene: 91783350
Centisome position: 44.79
GC content: 63.11
Gene sequence:
>1041_bases ATGAATCACCAAGGTACGGGGCTGGCGGGCAGGGCGAAGACACTCATCGTGGCGCTGGCACTGGGTGCGGCAGGCGCGCT AGGCGTAATGGCGCAGGCACACGCTGCCGACACGACGCTGCTGAACGTGTCCTACGACCCGACGCGCGAGTTGTATCAGG ACATCAACCAGGCGTTCGGCAAGCAATGGAAGGCGAAGACCGGCGACACGATCACCTTCAAGCAGTCGCACGGCGGCTCC GGCGCGCAGGCGCGTTCGGTGCTCGACGGTCTGCAGGCCGACGTCGTGACGCTTGCGCTCGCTTACGACATCGACGCACT GGCCAGCAAGGGGCTGCTGGACAAGGGCTGGCAGAAGCGTTTGCCGGATAACGCGTCGCCGTACACGTCGACGATCGTGT TTCTGGTGCGCAAGGGCAACCCGAAGCACATCAAGGACTGGGATGATCTGATCAAGCCGGGTGTCTCGATCGTCACGCCG AATCCGAAGACGTCGGGCGGCGCGCGCTGGAACTACCTCGCGGCCTGGGCGTACGCCGAGCATCAGCCGGGCGGCAATGA CCAGAAGGCCAAGGAATTCGTCGGCAAGCTTTACAAGAATGCCGGCGTGCTGGATTCGGGCGCGCGCGGCGCGACTACCA GCTTCGTGCAGCGCGGTATCGGCGACGTGCTGATCGCGTGGGAAAACGAAGCCTTCCTGTCGCTGAAGGAATTCGGTCCG GACAAGTTCGAGATCGTCGTGCCGTCGGTCAGCATTCTGGCGGAGCCGCCGGTTGCGGTGGTGGACAAGGTGGTCGACAG GCACGGCACGCGCAAGGTCGCCGAAGCGTATCTGAACTTCCTCTATAGCGAGGAAGGGCAGGAAATCGCCGCGAAGAACT TCTACCGTCCGCGTTCGAACAAGGTGCCGGCCGAGCTGACCGCGAAGTTTCCGAAGCTGAAGCTGTACACGGTGGACGAC TCGTTCGGCGGCTGGACCAACGCGCAGAAAACGCACTTTGCCGATGGCGGCGTGTTCGATTCGATCTACCAGCCGCAGTA A
Upstream 100 bases:
>100_bases TCGATAGACTGGCCTCCAGTTGGGGCTCATGTGCACGTGACCGCGACGCAGAGCAACACCACACGCTGTTTCAGCGAATT ACAACGCGGAGAAAGTTGAC
Downstream 100 bases:
>100_bases TACCGCCCGTGCCTGCAATGGCACAGGCAAAGCGACACGCTCACGCGTCACACCCAGGCGCGCCCCCAGGGGCGCGCTTT TGGCCAGCCAGGGCCCGGCG
Product: ABC sulfate/thiosulfate transporter, periplasmic ligand binding protein, CysP
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNHQGTGLAGRAKTLIVALALGAAGALGVMAQAHAADTTLLNVSYDPTRELYQDINQAFGKQWKAKTGDTITFKQSHGGS GAQARSVLDGLQADVVTLALAYDIDALASKGLLDKGWQKRLPDNASPYTSTIVFLVRKGNPKHIKDWDDLIKPGVSIVTP NPKTSGGARWNYLAAWAYAEHQPGGNDQKAKEFVGKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGP DKFEIVVPSVSILAEPPVAVVDKVVDRHGTRKVAEAYLNFLYSEEGQEIAAKNFYRPRSNKVPAELTAKFPKLKLYTVDD SFGGWTNAQKTHFADGGVFDSIYQPQ
Sequences:
>Translated_346_residues MNHQGTGLAGRAKTLIVALALGAAGALGVMAQAHAADTTLLNVSYDPTRELYQDINQAFGKQWKAKTGDTITFKQSHGGS GAQARSVLDGLQADVVTLALAYDIDALASKGLLDKGWQKRLPDNASPYTSTIVFLVRKGNPKHIKDWDDLIKPGVSIVTP NPKTSGGARWNYLAAWAYAEHQPGGNDQKAKEFVGKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGP DKFEIVVPSVSILAEPPVAVVDKVVDRHGTRKVAEAYLNFLYSEEGQEIAAKNFYRPRSNKVPAELTAKFPKLKLYTVDD SFGGWTNAQKTHFADGGVFDSIYQPQ >Mature_346_residues MNHQGTGLAGRAKTLIVALALGAAGALGVMAQAHAADTTLLNVSYDPTRELYQDINQAFGKQWKAKTGDTITFKQSHGGS GAQARSVLDGLQADVVTLALAYDIDALASKGLLDKGWQKRLPDNASPYTSTIVFLVRKGNPKHIKDWDDLIKPGVSIVTP NPKTSGGARWNYLAAWAYAEHQPGGNDQKAKEFVGKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGP DKFEIVVPSVSILAEPPVAVVDKVVDRHGTRKVAEAYLNFLYSEEGQEIAAKNFYRPRSNKVPAELTAKFPKLKLYTVDD SFGGWTNAQKTHFADGGVFDSIYQPQ
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=342, Percent_Identity=64.9122807017544, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1788765, Length=311, Percent_Identity=49.1961414790997, Blast_Score=303, Evalue=8e-84,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37439; Mature: 37439
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS00401 PROK_SULFATE_BIND_1 ; PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHQGTGLAGRAKTLIVALALGAAGALGVMAQAHAADTTLLNVSYDPTRELYQDINQAFG CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC KQWKAKTGDTITFKQSHGGSGAQARSVLDGLQADVVTLALAYDIDALASKGLLDKGWQKR CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHH LPDNASPYTSTIVFLVRKGNPKHIKDWDDLIKPGVSIVTPNPKTSGGARWNYLAAWAYAE CCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCEEEEEEEEECC HQPGGNDQKAKEFVGKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGP CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEEEHHHCCC DKFEIVVPSVSILAEPPVAVVDKVVDRHGTRKVAEAYLNFLYSEEGQEIAAKNFYRPRSN CEEEEEECCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC KVPAELTAKFPKLKLYTVDDSFGGWTNAQKTHFADGGVFDSIYQPQ CCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNHQGTGLAGRAKTLIVALALGAAGALGVMAQAHAADTTLLNVSYDPTRELYQDINQAFG CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC KQWKAKTGDTITFKQSHGGSGAQARSVLDGLQADVVTLALAYDIDALASKGLLDKGWQKR CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHH LPDNASPYTSTIVFLVRKGNPKHIKDWDDLIKPGVSIVTPNPKTSGGARWNYLAAWAYAE CCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCEEEEEEEEECC HQPGGNDQKAKEFVGKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGP CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEEEHHHCCC DKFEIVVPSVSILAEPPVAVVDKVVDRHGTRKVAEAYLNFLYSEEGQEIAAKNFYRPRSN CEEEEEECCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC KVPAELTAKFPKLKLYTVDDSFGGWTNAQKTHFADGGVFDSIYQPQ CCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]