| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783345
Identifier: 91783345
GI number: 91783345
Start: 2190289
End: 2190753
Strand: Direct
Name: 91783345
Synonym: Bxe_A2474
Alternate gene names: NA
Gene position: 2190289-2190753 (Clockwise)
Preceding gene: 91783342
Following gene: 91783349
Centisome position: 44.74
GC content: 63.66
Gene sequence:
>465_bases ATGGCGAGCTACCAGAAAATCCTGCTGTGCTACGACGGCTCGCGCGAAGGCCGCAAAGCGTTGCGTTGCGGCGCCGACCT GGCGATGGATCTGAAAGCCGAAACTCACCTGTTGTCGGTTGTCGACATGCGTTCGAGCATCGCGCAAAGCGCGGGCCTGC TGACCGATGTGGCTTGCGGCAGCTTCGAAAAGACCGCCCGCGACGTCCTCCAGGAAGGCGTGGACTGGCTCACCGAGCGA GGCGTGAGCGCGCAAGGGCATTTCGCGTTCGGCCATCCGATCGACGAGATCGCCAACCTCGCCAATGAATTGCATGTCGA CCTGGTCGTGGTCGGCCACCGCTGCCGTACGGGTCTGTCACGGTGGTGGATGGGTGCGGGCAATACGCCGCTGCTCGATC GCGTCTCGTGCAGCATTCTGGTGGCCTGTTCTTCCGCGCAGGAGCAGCAGCAAGCGGCGGCTTGA
Upstream 100 bases:
>100_bases CCGGTAGCACGCAGTTAGCGTTTTCCATCCCTTGCAACCTGAATTGCGGCGCACCATGATTCATTCAGATCGCGCGCCCC GCGCGAAGGGAGAAAAAATC
Downstream 100 bases:
>100_bases CGCACGGTCACGGGGAGCGTGTTTGACTGGCGCGGCCGTGCAAGCCTGACGACATCAGACAGTCATTCGTTGAGGTTGAC CGCGGCCAGCTTCCATGTGA
Product: putative universal stress protein, UspA
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Family Protein; Universal Stress Protein Family
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MASYQKILLCYDGSREGRKALRCGADLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACGSFEKTARDVLQEGVDWLTER GVSAQGHFAFGHPIDEIANLANELHVDLVVVGHRCRTGLSRWWMGAGNTPLLDRVSCSILVACSSAQEQQQAAA
Sequences:
>Translated_154_residues MASYQKILLCYDGSREGRKALRCGADLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACGSFEKTARDVLQEGVDWLTER GVSAQGHFAFGHPIDEIANLANELHVDLVVVGHRCRTGLSRWWMGAGNTPLLDRVSCSILVACSSAQEQQQAAA >Mature_153_residues ASYQKILLCYDGSREGRKALRCGADLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACGSFEKTARDVLQEGVDWLTERG VSAQGHFAFGHPIDEIANLANELHVDLVVVGHRCRTGLSRWWMGAGNTPLLDRVSCSILVACSSAQEQQQAAA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16617; Mature: 16486
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYQKILLCYDGSREGRKALRCGADLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACG CCCCEEEEEEECCCCHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHCC SFEKTARDVLQEGVDWLTERGVSAQGHFAFGHPIDEIANLANELHVDLVVVGHRCRTGLS CHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHEEEECCHHHHHHH RWWMGAGNTPLLDRVSCSILVACSSAQEQQQAAA HHHCCCCCCCCHHHHHHHHEEEECCHHHHHHCCC >Mature Secondary Structure ASYQKILLCYDGSREGRKALRCGADLAMDLKAETHLLSVVDMRSSIAQSAGLLTDVACG CCCEEEEEEECCCCHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHCC SFEKTARDVLQEGVDWLTERGVSAQGHFAFGHPIDEIANLANELHVDLVVVGHRCRTGLS CHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHEEEECCHHHHHHH RWWMGAGNTPLLDRVSCSILVACSSAQEQQQAAA HHHCCCCCCCCHHHHHHHHEEEECCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA