| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is ycgM [C]
Identifier: 91782462
GI number: 91782462
Start: 1209195
End: 1210055
Strand: Direct
Name: ycgM [C]
Synonym: Bxe_A3369
Alternate gene names: 91782462
Gene position: 1209195-1210055 (Clockwise)
Preceding gene: 91782457
Following gene: 91782463
Centisome position: 24.7
GC content: 70.85
Gene sequence:
>861_bases ATGAAACTGGTACGGTGGGGACAGCCCGGCGCGGAGAAGCCGGGCATGCTGGATAACGAAGGGCGGGTGCGCAGTCTGGT CGGCGTGATCGACGACTGGCACGGTGCGGCGCTCGCGGACGGCGCGCTCGCGCGCGTCGCGGCGCTCGATCCGCAAACAC TGCCGGCGGTCGCGCCGGGCGAACGGCTCGGCCCGTGCGTCGGCGCGGTCGGCAAGTTCGTATGCGTCGGCCTGAACTAC ACGGACCATGCCGCCGAAGCGGGCATGGCGCTGCCGAAGGAGCCGATCCTGTTCCTCAAGGCGACGAGCGCGATCAACGG CCCGGCCGATCCGATCCGCATGCCGCGCGACGCGGTGAAGGTGGATTGGGAAGTGGAGTTGGGCATCGTGATCGGCAAGA CCGCCAGCTACGTGACGAGAGACGACGCGCTGGCGCACGTCGCGGGCTACTGCGTGGTCAACGACGTCTCCGAGCGCGCG TTCCAGCTGGAGCGCGGCGGCCAGTGGGACAAGGGCAAGGCGGCGGACACGTTCGGCCCGCTCGGCCCCTGGCTCGTCAC CGCGGACGAGGTGCCGGACCCGCAGGCGCTGCCGCTCTGGCTCGACGTGGACGGCGTGCGCCGCCAGGCCGGCAACACAC GCGACATGATCTTCGGCGTCGCGGAACTGGTGTCGTACATCAGCGGCTTCATGAGCCTGCAACCGGGCGACGTGATCGCA ACGGGCACGCCGGCCGGCGTCGGCATGGGCTTCAAGCCGCCGGTCTACCTGCAGGCCGGCCAGACCGTGCGTGCCGGGAT CGCGGGCCTTGGCGAGCAGTCGTCGCCGGTGGTCGCGTTCCACGCGACAGCGCAGGCCTGA
Upstream 100 bases:
>100_bases TCGCGAAAACTTCTCTTGACACTGCGTTGTCCGGTCGATTATCTTAAAAACGTACATTGCACACCAAGTACGTTATAGAC AGAAAGAGACAGGAATCGAG
Downstream 100 bases:
>100_bases CATGGCCGATACGATTACCTGTGTCGACGATCTGCAGCGGCTCGCGCGCCGGCGCGTGCCGAAGATTTTCTACGACTACG TGGACAGCGGCTCGTGGACC
Product: putative fumarylacetoacetate hydrolase family protein
Products: NA
Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPGERLGPCVGAVGKFVCVGLNY TDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVKVDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERA FQLERGGQWDKGKAADTFGPLGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA
Sequences:
>Translated_286_residues MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPGERLGPCVGAVGKFVCVGLNY TDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVKVDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERA FQLERGGQWDKGKAADTFGPLGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA >Mature_286_residues MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPGERLGPCVGAVGKFVCVGLNY TDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVKVDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERA FQLERGGQWDKGKAADTFGPLGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAH family [H]
Homologues:
Organism=Homo sapiens, GI156231349, Length=201, Percent_Identity=50.2487562189055, Blast_Score=205, Evalue=3e-53, Organism=Homo sapiens, GI40786394, Length=201, Percent_Identity=49.2537313432836, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI215422413, Length=207, Percent_Identity=39.1304347826087, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI66348062, Length=202, Percent_Identity=39.1089108910891, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=39.3034825870647, Blast_Score=137, Evalue=1e-32, Organism=Escherichia coli, GI1787428, Length=182, Percent_Identity=42.3076923076923, Blast_Score=142, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17557057, Length=179, Percent_Identity=40.7821229050279, Blast_Score=137, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6324161, Length=218, Percent_Identity=31.1926605504587, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI28572127, Length=287, Percent_Identity=39.7212543554007, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24663695, Length=278, Percent_Identity=32.7338129496403, Blast_Score=153, Evalue=1e-37, Organism=Drosophila melanogaster, GI28571789, Length=211, Percent_Identity=39.8104265402844, Blast_Score=146, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.3.2.3 [H]
Molecular weight: Translated: 29931; Mature: 29931
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPG CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCCCCCCCCC ERLGPCVGAVGKFVCVGLNYTDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVK HHHHHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHEE VDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERAFQLERGGQWDKGKAADTFGP EEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCCCCCCCCCCCC LGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA CCCEEEEECCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA CCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEEEEECCC >Mature Secondary Structure MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPG CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCCCCCCCCC ERLGPCVGAVGKFVCVGLNYTDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVK HHHHHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHEE VDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERAFQLERGGQWDKGKAADTFGP EEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCCCCCCCCCCCC LGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA CCCEEEEECCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA CCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA