The gene/protein map for NC_007951 is currently unavailable.
Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is ycgM [C]

Identifier: 91782462

GI number: 91782462

Start: 1209195

End: 1210055

Strand: Direct

Name: ycgM [C]

Synonym: Bxe_A3369

Alternate gene names: 91782462

Gene position: 1209195-1210055 (Clockwise)

Preceding gene: 91782457

Following gene: 91782463

Centisome position: 24.7

GC content: 70.85

Gene sequence:

>861_bases
ATGAAACTGGTACGGTGGGGACAGCCCGGCGCGGAGAAGCCGGGCATGCTGGATAACGAAGGGCGGGTGCGCAGTCTGGT
CGGCGTGATCGACGACTGGCACGGTGCGGCGCTCGCGGACGGCGCGCTCGCGCGCGTCGCGGCGCTCGATCCGCAAACAC
TGCCGGCGGTCGCGCCGGGCGAACGGCTCGGCCCGTGCGTCGGCGCGGTCGGCAAGTTCGTATGCGTCGGCCTGAACTAC
ACGGACCATGCCGCCGAAGCGGGCATGGCGCTGCCGAAGGAGCCGATCCTGTTCCTCAAGGCGACGAGCGCGATCAACGG
CCCGGCCGATCCGATCCGCATGCCGCGCGACGCGGTGAAGGTGGATTGGGAAGTGGAGTTGGGCATCGTGATCGGCAAGA
CCGCCAGCTACGTGACGAGAGACGACGCGCTGGCGCACGTCGCGGGCTACTGCGTGGTCAACGACGTCTCCGAGCGCGCG
TTCCAGCTGGAGCGCGGCGGCCAGTGGGACAAGGGCAAGGCGGCGGACACGTTCGGCCCGCTCGGCCCCTGGCTCGTCAC
CGCGGACGAGGTGCCGGACCCGCAGGCGCTGCCGCTCTGGCTCGACGTGGACGGCGTGCGCCGCCAGGCCGGCAACACAC
GCGACATGATCTTCGGCGTCGCGGAACTGGTGTCGTACATCAGCGGCTTCATGAGCCTGCAACCGGGCGACGTGATCGCA
ACGGGCACGCCGGCCGGCGTCGGCATGGGCTTCAAGCCGCCGGTCTACCTGCAGGCCGGCCAGACCGTGCGTGCCGGGAT
CGCGGGCCTTGGCGAGCAGTCGTCGCCGGTGGTCGCGTTCCACGCGACAGCGCAGGCCTGA

Upstream 100 bases:

>100_bases
TCGCGAAAACTTCTCTTGACACTGCGTTGTCCGGTCGATTATCTTAAAAACGTACATTGCACACCAAGTACGTTATAGAC
AGAAAGAGACAGGAATCGAG

Downstream 100 bases:

>100_bases
CATGGCCGATACGATTACCTGTGTCGACGATCTGCAGCGGCTCGCGCGCCGGCGCGTGCCGAAGATTTTCTACGACTACG
TGGACAGCGGCTCGTGGACC

Product: putative fumarylacetoacetate hydrolase family protein

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPGERLGPCVGAVGKFVCVGLNY
TDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVKVDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERA
FQLERGGQWDKGKAADTFGPLGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA
TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA

Sequences:

>Translated_286_residues
MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPGERLGPCVGAVGKFVCVGLNY
TDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVKVDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERA
FQLERGGQWDKGKAADTFGPLGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA
TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA
>Mature_286_residues
MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPGERLGPCVGAVGKFVCVGLNY
TDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVKVDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERA
FQLERGGQWDKGKAADTFGPLGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA
TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=201, Percent_Identity=50.2487562189055, Blast_Score=205, Evalue=3e-53,
Organism=Homo sapiens, GI40786394, Length=201, Percent_Identity=49.2537313432836, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI215422413, Length=207, Percent_Identity=39.1304347826087, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI66348062, Length=202, Percent_Identity=39.1089108910891, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=39.3034825870647, Blast_Score=137, Evalue=1e-32,
Organism=Escherichia coli, GI1787428, Length=182, Percent_Identity=42.3076923076923, Blast_Score=142, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17557057, Length=179, Percent_Identity=40.7821229050279, Blast_Score=137, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6324161, Length=218, Percent_Identity=31.1926605504587, Blast_Score=101, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28572127, Length=287, Percent_Identity=39.7212543554007, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24663695, Length=278, Percent_Identity=32.7338129496403, Blast_Score=153, Evalue=1e-37,
Organism=Drosophila melanogaster, GI28571789, Length=211, Percent_Identity=39.8104265402844, Blast_Score=146, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 29931; Mature: 29931

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPG
CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCCCCCCCCC
ERLGPCVGAVGKFVCVGLNYTDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVK
HHHHHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHEE
VDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERAFQLERGGQWDKGKAADTFGP
EEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCCCCCCCCCCCC
LGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA
CCCEEEEECCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA
CCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKLVRWGQPGAEKPGMLDNEGRVRSLVGVIDDWHGAALADGALARVAALDPQTLPAVAPG
CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCCCCCCCCC
ERLGPCVGAVGKFVCVGLNYTDHAAEAGMALPKEPILFLKATSAINGPADPIRMPRDAVK
HHHHHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHEE
VDWEVELGIVIGKTASYVTRDDALAHVAGYCVVNDVSERAFQLERGGQWDKGKAADTFGP
EEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCCCCCCCCCCCC
LGPWLVTADEVPDPQALPLWLDVDGVRRQAGNTRDMIFGVAELVSYISGFMSLQPGDVIA
CCCEEEEECCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
TGTPAGVGMGFKPPVYLQAGQTVRAGIAGLGEQSSPVVAFHATAQA
CCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA