| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pgl [H]
Identifier: 91782378
GI number: 91782378
Start: 1115744
End: 1116451
Strand: Reverse
Name: pgl [H]
Synonym: Bxe_A3453
Alternate gene names: 91782378
Gene position: 1116451-1115744 (Counterclockwise)
Preceding gene: 91782379
Following gene: 91782377
Centisome position: 22.8
GC content: 64.12
Gene sequence:
>708_bases GTGATCGAGCTTCACGCTTTCGACGATCAACGCGCCCAGTCTGACGCGTTGGCGAAAGCGGTTGGCGACGCGCTACATGC GTCGCTCGCCGCACAGGCCGCCGGTGCCGCCACCGGCGCGCGCCAGGCAATGCTTGCAGTGTCCGGCGGCAGCAGTCCAC GGCCGTTCCTGCAGACCTTGTCCACGCAGTCCTTCGACTGGCCACGGATCGCCGTGACGCTGGTCGACGACCGCTGGGTG CCCGAAACGGACAGCGCGAGCAATTCGCAGCTGGTGCACGCCACGCTGTTGCAGAACGCCGCGAAAGACACCGCGTTCTG GCCGCTCGTGGACACCACGCAGGATCTCGACGCGCATGTCGCCGCGCTGAACGCCGACGCGCGTTTCAGCAGCGTGCCCG ACGTCGCGATTCTCGGCATGGGCGAAGACGGCCACACCGCGTCGATCTTTGCCGACTCGCCCGAATGGGACCATGCGATC ACCACCACCGAGCGCTTCGTTGCCGTGCATCCCGGCAGCGCGCCGCATGCGCGCGTGAGCTGGTCGCTATCCGCGTTGAA GGATGTGAAGCACCTGTTTTTGCTGATTGCGGGACCGCGCAAGATGGACGTGCTGAATGCCGCGTCCGCTTCGCTACAAA AAAATGCCATCTCACAGTTGGCAAACGACAAGGGAGTGAGACTCGATGTCTACTGGTGTGCAAACTAA
Upstream 100 bases:
>100_bases GTATCACGAGGGCGCCTGCAAGTCATCCACCTTGCAGGCATCGCGTGAGAGCAGTACGGCACATTCCGCAGATCCAACAA GAAAGCAGCACGGAGGAGAA
Downstream 100 bases:
>100_bases GGCTGCTCCGGGCGCGGGCCAGCACGCCGATGGACCCAGGCTGCTGGCCGATATCGGCGGCACCAACGCGCGCTTCGCGC TGGAGACGAGTCCGGGCGAA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MIELHAFDDQRAQSDALAKAVGDALHASLAAQAAGAATGARQAMLAVSGGSSPRPFLQTLSTQSFDWPRIAVTLVDDRWV PETDSASNSQLVHATLLQNAAKDTAFWPLVDTTQDLDAHVAALNADARFSSVPDVAILGMGEDGHTASIFADSPEWDHAI TTTERFVAVHPGSAPHARVSWSLSALKDVKHLFLLIAGPRKMDVLNAASASLQKNAISQLANDKGVRLDVYWCAN
Sequences:
>Translated_235_residues MIELHAFDDQRAQSDALAKAVGDALHASLAAQAAGAATGARQAMLAVSGGSSPRPFLQTLSTQSFDWPRIAVTLVDDRWV PETDSASNSQLVHATLLQNAAKDTAFWPLVDTTQDLDAHVAALNADARFSSVPDVAILGMGEDGHTASIFADSPEWDHAI TTTERFVAVHPGSAPHARVSWSLSALKDVKHLFLLIAGPRKMDVLNAASASLQKNAISQLANDKGVRLDVYWCAN >Mature_235_residues MIELHAFDDQRAQSDALAKAVGDALHASLAAQAAGAATGARQAMLAVSGGSSPRPFLQTLSTQSFDWPRIAVTLVDDRWV PETDSASNSQLVHATLLQNAAKDTAFWPLVDTTQDLDAHVAALNADARFSSVPDVAILGMGEDGHTASIFADSPEWDHAI TTTERFVAVHPGSAPHARVSWSLSALKDVKHLFLLIAGPRKMDVLNAASASLQKNAISQLANDKGVRLDVYWCAN
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=196, Percent_Identity=34.1836734693878, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533058, Length=197, Percent_Identity=29.4416243654822, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533060, Length=197, Percent_Identity=29.4416243654822, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 24988; Mature: 24988
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELHAFDDQRAQSDALAKAVGDALHASLAAQAAGAATGARQAMLAVSGGSSPRPFLQTL CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH STQSFDWPRIAVTLVDDRWVPETDSASNSQLVHATLLQNAAKDTAFWPLVDTTQDLDAHV CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHCCCCEEECCCCCCCCCCCEE AALNADARFSSVPDVAILGMGEDGHTASIFADSPEWDHAITTTERFVAVHPGSAPHARVS EEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEECCEEEEEECCCCCCCCEEE WSLSALKDVKHLFLLIAGPRKMDVLNAASASLQKNAISQLANDKGVRLDVYWCAN EHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MIELHAFDDQRAQSDALAKAVGDALHASLAAQAAGAATGARQAMLAVSGGSSPRPFLQTL CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH STQSFDWPRIAVTLVDDRWVPETDSASNSQLVHATLLQNAAKDTAFWPLVDTTQDLDAHV CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHCCCCEEECCCCCCCCCCCEE AALNADARFSSVPDVAILGMGEDGHTASIFADSPEWDHAITTTERFVAVHPGSAPHARVS EEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEECCEEEEEECCCCCCCCEEE WSLSALKDVKHLFLLIAGPRKMDVLNAASASLQKNAISQLANDKGVRLDVYWCAN EHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA