| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781935
Identifier: 91781935
GI number: 91781935
Start: 618669
End: 619148
Strand: Reverse
Name: 91781935
Synonym: Bxe_A3908
Alternate gene names: NA
Gene position: 619148-618669 (Counterclockwise)
Preceding gene: 91781936
Following gene: 91781928
Centisome position: 12.65
GC content: 61.46
Gene sequence:
>480_bases ATGAGCCAGATCCACTCCGATACCGCATTCCGTAACAAACGCCACCAGGCCAAAGACCTGAGCGCACCTCATTTGCGAGC GCTGCGCAAGGAACTGCTGCTGGTGCGCGCGGACGTCGAGCGTATGGAACTCGCGCAGGCGACCATCGAATTGCGGCAAG CGGTTACCCACTTCAGCTGGCTCAAGTTCATTCTGCCGGGCTTCGGCGGCATGCAAGTCGGCAAGGGCCCGAAGGCGGGC TTTATCAACGCGGGGACCATCGGTGCCCTGCTCAAACAGTATCCGATCGTCAGTTCTATCGCTTCGCTCATCCTCGCCAA GCCGCTGCGCGCAACGGTCGCAGCCGGCGCCAAACCGCTGCTCAAGTGGGGCAGCCTCGGCCTTGCCGGGTGGGAAGCGT ATCGGATCTGGCAACAGATGAAGCAGGAATCTGCTGCGTCGTCTGACAACAGGCCGGACTCGACGGATAGCGGCTATTGA
Upstream 100 bases:
>100_bases ACCCGGCAGACGCAACGGCGTGCCCTGCGTCTGCCCTTGAGAATCTCGCGCGATTTGCAGCGCCGTTCTACCGTCCCACC TTCACTGCCGCCGACACGCC
Downstream 100 bases:
>100_bases GGTTTGATGGGGGGTGCCGTTGCGGGGTGCCGTTGCGGGGTGCCGTTGCGGGGTGCCGTTGCGGGGTGCCGTTGCGGGCT ACGGTTTGTGGCCTGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSQIHSDTAFRNKRHQAKDLSAPHLRALRKELLLVRADVERMELAQATIELRQAVTHFSWLKFILPGFGGMQVGKGPKAG FINAGTIGALLKQYPIVSSIASLILAKPLRATVAAGAKPLLKWGSLGLAGWEAYRIWQQMKQESAASSDNRPDSTDSGY
Sequences:
>Translated_159_residues MSQIHSDTAFRNKRHQAKDLSAPHLRALRKELLLVRADVERMELAQATIELRQAVTHFSWLKFILPGFGGMQVGKGPKAG FINAGTIGALLKQYPIVSSIASLILAKPLRATVAAGAKPLLKWGSLGLAGWEAYRIWQQMKQESAASSDNRPDSTDSGY >Mature_158_residues SQIHSDTAFRNKRHQAKDLSAPHLRALRKELLLVRADVERMELAQATIELRQAVTHFSWLKFILPGFGGMQVGKGPKAGF INAGTIGALLKQYPIVSSIASLILAKPLRATVAAGAKPLLKWGSLGLAGWEAYRIWQQMKQESAASSDNRPDSTDSGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17410; Mature: 17279
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIHSDTAFRNKRHQAKDLSAPHLRALRKELLLVRADVERMELAQATIELRQAVTHFSW CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKFILPGFGGMQVGKGPKAGFINAGTIGALLKQYPIVSSIASLILAKPLRATVAAGAKPL HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHH LKWGSLGLAGWEAYRIWQQMKQESAASSDNRPDSTDSGY HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SQIHSDTAFRNKRHQAKDLSAPHLRALRKELLLVRADVERMELAQATIELRQAVTHFSW CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKFILPGFGGMQVGKGPKAGFINAGTIGALLKQYPIVSSIASLILAKPLRATVAAGAKPL HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHH LKWGSLGLAGWEAYRIWQQMKQESAASSDNRPDSTDSGY HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA