| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781936
Identifier: 91781936
GI number: 91781936
Start: 619248
End: 619634
Strand: Reverse
Name: 91781936
Synonym: Bxe_A3907
Alternate gene names: NA
Gene position: 619634-619248 (Counterclockwise)
Preceding gene: 91781937
Following gene: 91781935
Centisome position: 12.66
GC content: 59.95
Gene sequence:
>387_bases ATGACGATCGACACACAATCGCAGCGCGGAGAACATAGTCCCTTGCGCCGCATAATCGGTTCCGTGTTTGCCATTCTGCA GACGCGGCTGGAACTGGTCGGCATTGAACTCGCCGAAGAAAAAGACCGTCTGCTCGGCGTGCTGTTCCTTGGCCTCGCGG CCATGATGCTCGCCACGATGGCCTTGATCGCGCTGACAGCACTGATCGCCATTGCATTCTGGGACACCTACCGCTGGCAA GCGCTCGCCGGCATCACCGCGGTCTATGCGATCGCGGGATTAGCCTGTGCGCTGAAAGCGCGCAGCGGCTTGCGCAACGC GCCAATGGTGTTCGAAGCGACCATTGCCGAGTTCGAAAAAGACCGCGACGTGTTCCGCAAACCGTGA
Upstream 100 bases:
>100_bases GCCCACCAGCGAATCGGGTTGACCGGCGCAGGTTTGGCCGGTCCGCTTTTCCTGGCGCGCGCGCGCGCCGTTCAGGCCTT CACGCGCAACGCCCACAGCC
Downstream 100 bases:
>100_bases CCCGGCAGACGCAACGGCGTGCCCTGCGTCTGCCCTTGAGAATCTCGCGCGATTTGCAGCGCCGTTCTACCGTCCCACCT TCACTGCCGCCGACACGCCA
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTIDTQSQRGEHSPLRRIIGSVFAILQTRLELVGIELAEEKDRLLGVLFLGLAAMMLATMALIALTALIAIAFWDTYRWQ ALAGITAVYAIAGLACALKARSGLRNAPMVFEATIAEFEKDRDVFRKP
Sequences:
>Translated_128_residues MTIDTQSQRGEHSPLRRIIGSVFAILQTRLELVGIELAEEKDRLLGVLFLGLAAMMLATMALIALTALIAIAFWDTYRWQ ALAGITAVYAIAGLACALKARSGLRNAPMVFEATIAEFEKDRDVFRKP >Mature_127_residues TIDTQSQRGEHSPLRRIIGSVFAILQTRLELVGIELAEEKDRLLGVLFLGLAAMMLATMALIALTALIAIAFWDTYRWQA LAGITAVYAIAGLACALKARSGLRNAPMVFEATIAEFEKDRDVFRKP
Specific function: Unknown
COG id: COG5393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14080; Mature: 13949
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDTQSQRGEHSPLRRIIGSVFAILQTRLELVGIELAEEKDRLLGVLFLGLAAMMLATM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIALTALIAIAFWDTYRWQALAGITAVYAIAGLACALKARSGLRNAPMVFEATIAEFEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH DRDVFRKP HHHHHCCC >Mature Secondary Structure TIDTQSQRGEHSPLRRIIGSVFAILQTRLELVGIELAEEKDRLLGVLFLGLAAMMLATM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIALTALIAIAFWDTYRWQALAGITAVYAIAGLACALKARSGLRNAPMVFEATIAEFEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH DRDVFRKP HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA