The gene/protein map for NC_007951 is currently unavailable.
Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is dan [H]

Identifier: 91781787

GI number: 91781787

Start: 446992

End: 448473

Strand: Direct

Name: dan [H]

Synonym: Bxe_A4058

Alternate gene names: 91781787

Gene position: 446992-448473 (Clockwise)

Preceding gene: 91781786

Following gene: 91781788

Centisome position: 9.13

GC content: 66.67

Gene sequence:

>1482_bases
ATGCATTCGCATCCCGAAGCCGCCGATACGCTGATCTTCGGCGCGCAACTGTACGACGGCACGGGCGCGCCGCCGGTCGA
GCGCGATGTCGCGGTGCGTGACGGCCGCATCGTCGCGATCGGCAATCTGTCGAACTGGCTGGCCGAAGAGGTGATCGAGG
CCGAAGGCCGCGCGCTGGCGCCGGGCTTCATCGACGTTCATACGCACGACGACACGCACGTGATCCGCTCGCCGCAAATG
CTGCCGAAGATCACGCAAGGCGTGACGACGGTGATTGTCGGCAATTGCGGCATCAGCGCGTCGCCGGTTGCGCTCAGGGG
CGAGCCGCCCGATCCGATGAACCTGCTCGGCGAGCGCGACGCGTTCCAGTATCCGACCTTCGCCGCGTATGTCGCAGCGG
TCAATGCGGCGCGGCCAGCGGTGAACGTCGGCGCGCTGATCGGACATACGGCGTTGCGCAGCAACCAGATGGACCGGCTC
GATCGCGCGGCGACCGGGCAGGAAATCGAAGCCATGCGCGCTCAACTCGAAGAAGCATTGGCCAACGGCGCGCTGGGTTT
GAGCTCGGGGCTTGCCTACGGCTCGGCGTTCGCCGCGCCGGCCGAAGAAGTGATGGCGCTGGCTGAACCGCTCGCCGCCG
CCGGCGCGCTGTACACCACGCATATGCGCACCGAGTTCGACGCGATTCTCGACGCAATGGAAGAAGCGTATCGCGTGGGC
CGTCATGCGCACGTGCCGGTGGTGATTTCGCATCTGAAGTGCGCTGGGCCGTCGAACTGGGGCCGCAGCGAAGAAGTGCT
GAAGTCGCTGGAAGGCGCGCGCCGCCTGCAGCCGGTCGGTTGCGATTGCTATCCATACAACCGCAGTTCGTCGACGCTCG
ATCTGAAGCAGGTGACGGGCGATATCGACATCACGATTACGTGGTCGGAGCCGCATCCGGAGATGGCGGGCAAGCTCGTG
AAGGAGATTGCCGCGGAGTGGGGCGTCACGCAGCAGGAAGCGGGCAAGCGCCTGCAACCGGCGGGCGCGGTGTATCACAA
CATGTCCGAAGACGACGTGCGGCGCATTCTCTCGCATCCCGCGACGATGGTCGGCTCGGACGGTTTGCCGAACGATCCGC
TGCCGCATCCGCGCTTGTGGGGCGCATTTCCGCGCGTGCTTGGCCACTATGCGCGCGACGCGGGCTTGCTGCCGCTCGAA
GAAGCGGTGCGCAAGATGACCAGCCTGTCGGCGCGGCGCTTTGGTCTGGCGCAGCGTGGCGAGGTGCATATCGGCTATCA
CGCCGATCTGGTGCTGTTCGACCCGGCCAGAGTGCGCGATGCGGCGACGTTCGAAAAACCGCAGCAGGCCGCCGACGGTA
TCGACGCGGTGTGGGTGAACGGCGTGTTGTCGTACCGCGACGGCGAAGTGATGGGCGAGCGCGCCGGTCACTTCGTGGCG
CGTGGCGCGGCGTCGAAGGGCGACGCGCACGGCGCGTTCTGA

Upstream 100 bases:

>100_bases
CAGTCAGGGCGACGAGAGCCGCGAACTGCTGCGCCGCATGAAGCATGCGCTCGACACGCACCGCGGCGGCGGCGATCGAC
AACCGTTAGGAGACTGATCC

Downstream 100 bases:

>100_bases
ATTTTTGATCGATTGATTGCGGCGCGCGGGGCGATTCTGCCGAACGCGCGTCGGACTATTCAAGGAGTGTAGTGATGAAA
CGATATGGTGTTGAAGGCGG

Product: N-acyl-D-amino-acid deacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MHSHPEAADTLIFGAQLYDGTGAPPVERDVAVRDGRIVAIGNLSNWLAEEVIEAEGRALAPGFIDVHTHDDTHVIRSPQM
LPKITQGVTTVIVGNCGISASPVALRGEPPDPMNLLGERDAFQYPTFAAYVAAVNAARPAVNVGALIGHTALRSNQMDRL
DRAATGQEIEAMRAQLEEALANGALGLSSGLAYGSAFAAPAEEVMALAEPLAAAGALYTTHMRTEFDAILDAMEEAYRVG
RHAHVPVVISHLKCAGPSNWGRSEEVLKSLEGARRLQPVGCDCYPYNRSSSTLDLKQVTGDIDITITWSEPHPEMAGKLV
KEIAAEWGVTQQEAGKRLQPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYARDAGLLPLE
EAVRKMTSLSARRFGLAQRGEVHIGYHADLVLFDPARVRDAATFEKPQQAADGIDAVWVNGVLSYRDGEVMGERAGHFVA
RGAASKGDAHGAF

Sequences:

>Translated_493_residues
MHSHPEAADTLIFGAQLYDGTGAPPVERDVAVRDGRIVAIGNLSNWLAEEVIEAEGRALAPGFIDVHTHDDTHVIRSPQM
LPKITQGVTTVIVGNCGISASPVALRGEPPDPMNLLGERDAFQYPTFAAYVAAVNAARPAVNVGALIGHTALRSNQMDRL
DRAATGQEIEAMRAQLEEALANGALGLSSGLAYGSAFAAPAEEVMALAEPLAAAGALYTTHMRTEFDAILDAMEEAYRVG
RHAHVPVVISHLKCAGPSNWGRSEEVLKSLEGARRLQPVGCDCYPYNRSSSTLDLKQVTGDIDITITWSEPHPEMAGKLV
KEIAAEWGVTQQEAGKRLQPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYARDAGLLPLE
EAVRKMTSLSARRFGLAQRGEVHIGYHADLVLFDPARVRDAATFEKPQQAADGIDAVWVNGVLSYRDGEVMGERAGHFVA
RGAASKGDAHGAF
>Mature_493_residues
MHSHPEAADTLIFGAQLYDGTGAPPVERDVAVRDGRIVAIGNLSNWLAEEVIEAEGRALAPGFIDVHTHDDTHVIRSPQM
LPKITQGVTTVIVGNCGISASPVALRGEPPDPMNLLGERDAFQYPTFAAYVAAVNAARPAVNVGALIGHTALRSNQMDRL
DRAATGQEIEAMRAQLEEALANGALGLSSGLAYGSAFAAPAEEVMALAEPLAAAGALYTTHMRTEFDAILDAMEEAYRVG
RHAHVPVVISHLKCAGPSNWGRSEEVLKSLEGARRLQPVGCDCYPYNRSSSTLDLKQVTGDIDITITWSEPHPEMAGKLV
KEIAAEWGVTQQEAGKRLQPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYARDAGLLPLE
EAVRKMTSLSARRFGLAQRGEVHIGYHADLVLFDPARVRDAATFEKPQQAADGIDAVWVNGVLSYRDGEVMGERAGHFVA
RGAASKGDAHGAF

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 52831; Mature: 52831

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSHPEAADTLIFGAQLYDGTGAPPVERDVAVRDGRIVAIGNLSNWLAEEVIEAEGRALA
CCCCCCHHHHEEEECEEECCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHCCCEEC
PGFIDVHTHDDTHVIRSPQMLPKITQGVTTVIVGNCGISASPVALRGEPPDPMNLLGERD
CCEEEEECCCCCCEECCCHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHCCCCC
AFQYPTFAAYVAAVNAARPAVNVGALIGHTALRSNQMDRLDRAATGQEIEAMRAQLEEAL
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHH
ANGALGLSSGLAYGSAFAAPAEEVMALAEPLAAAGALYTTHMRTEFDAILDAMEEAYRVG
HCCCCCHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RHAHVPVVISHLKCAGPSNWGRSEEVLKSLEGARRLQPVGCDCYPYNRSSSTLDLKQVTG
CCCCCHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHCCC
DIDITITWSEPHPEMAGKLVKEIAAEWGVTQQEAGKRLQPAGAVYHNMSEDDVRRILSHP
CEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCHHHHHHHHHCC
ATMVGSDGLPNDPLPHPRLWGAFPRVLGHYARDAGLLPLEEAVRKMTSLSARRFGLAQRG
HHECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EVHIGYHADLVLFDPARVRDAATFEKPQQAADGIDAVWVNGVLSYRDGEVMGERAGHFVA
CEEEEEECCEEEECCHHHHHHHHHCCHHHHHCCCCEEECCCEEECCCCHHHHHHHCHHHC
RGAASKGDAHGAF
CCCCCCCCCCCCC
>Mature Secondary Structure
MHSHPEAADTLIFGAQLYDGTGAPPVERDVAVRDGRIVAIGNLSNWLAEEVIEAEGRALA
CCCCCCHHHHEEEECEEECCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHCCCEEC
PGFIDVHTHDDTHVIRSPQMLPKITQGVTTVIVGNCGISASPVALRGEPPDPMNLLGERD
CCEEEEECCCCCCEECCCHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHCCCCC
AFQYPTFAAYVAAVNAARPAVNVGALIGHTALRSNQMDRLDRAATGQEIEAMRAQLEEAL
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHH
ANGALGLSSGLAYGSAFAAPAEEVMALAEPLAAAGALYTTHMRTEFDAILDAMEEAYRVG
HCCCCCHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RHAHVPVVISHLKCAGPSNWGRSEEVLKSLEGARRLQPVGCDCYPYNRSSSTLDLKQVTG
CCCCCHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHCCC
DIDITITWSEPHPEMAGKLVKEIAAEWGVTQQEAGKRLQPAGAVYHNMSEDDVRRILSHP
CEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCHHHHHHHHHCC
ATMVGSDGLPNDPLPHPRLWGAFPRVLGHYARDAGLLPLEEAVRKMTSLSARRFGLAQRG
HHECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EVHIGYHADLVLFDPARVRDAATFEKPQQAADGIDAVWVNGVLSYRDGEVMGERAGHFVA
CEEEEEECCEEEECCHHHHHHHHHCCHHHHHCCCCEEECCCEEECCCCHHHHHHHCHHHC
RGAASKGDAHGAF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]