| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781749
Identifier: 91781749
GI number: 91781749
Start: 403410
End: 404753
Strand: Reverse
Name: 91781749
Synonym: Bxe_A4096
Alternate gene names: NA
Gene position: 404753-403410 (Counterclockwise)
Preceding gene: 91781750
Following gene: 91781744
Centisome position: 8.27
GC content: 64.43
Gene sequence:
>1344_bases ATGAACATGATTCCCGACCGCTTGAAGCAATACCTGATACCCGTGTTTGCGCTGATCTGCAGCGGCACGCCCGGCGCTGC GAACGCGCAGGCGCCCGGCACCGTGCCCGCGCCGACGACGGTCGACGCGCAACTGGCTCAAGGCGCGTATCTCGCGAAAG CCGGCGACTGCGCGGCCTGTCACACGGCGAACAAGGCGCAACCGTTCGCCGGCGGCCTGCCGCTTGCGACGCCCTTCGGT ACGCTCTATTCGACCAACATCACACCGGACGCATCGACCGGCATCGGCAGCTATAGCTATGACGACTTCGCCACGGCGTT GCGCCAGGGTATCGCCAAAGACGGCCATCGTCTCTATCCGGCCATGCCGTATCCGTCGTACGCAAAGATCGACGACGCCG ACATGCACGCGCTGTACCGCTATTTCACGCAGGGCGTCAAACCCGTCGAGCAAACCAATCGTGCCTCGGCACTGCGGTTT CCATTCAACGTCCGCGTGTTGATGTCGATATGGGACCGCTGGTATGCGCACGATCATCCGGCCTATCGGGCGGACCCGCA CCAGAGCGTCGAATGGAATCGTGGCGCGTATCTGGTGCAAGGGCTCGCGCATTGCGGCGCATGTCATACGCCGCACGGCA TGCTCGGGCAGGAAACCGCGCTCGACGACAAGGACAACACCGTGTTTCTGTCCGGCAATACGCTCGCGGGCTGGTACGCG CCAAACCTGCGCGGACACCCGCTGCAGACATCCGACAGCAGCAAGGTATCGGGCAAGGCGGACCTCGTCGCCTACCTGCG CAGCGGACGTCTGCACGACGGCGCGGCGTTCGGTCCGATGACGGAAGTCATCGACGACAGCACGCAGTATCTTCACGACG ACGATCTGAACGCGATTGCAACGTATCTGACGTCGCCGGCTTTGCAGGCGCGTGCGACGCCGACGGTCGCACCGCAGACG ACTTATACGGACCGGACGGCGAGCGCGCTCAGGGCGGGTCACGTCGATTCAGCCGGCGCGCGTCTCTATCTGGACAACTG CGCCGCCTGTCATCGCACCGACGGCACGGGCGCGATGCCTGCGTTCCCGAGTCTGAACGGCAATGCCGCGGTGCTCAGCG ACGATCCGGCATCGCTGATTCATATCGTCTTGAGCGGCTCGCACATGCCGTCCACGGCAGCGGCACCGACGCCGCTCGCC ATGCCCGATTTCGGCTGGCGTCTGACCGATCGGCAGATCGCCGATCTACTGAGCTTTGTCCGCGGTAGTTGGGGAAATCG CGCGACCGATGTTTCCGCCGCCGAGGTCGCGAAGGTTCGCGCCGTGACGGTCGGCGCAAAATAG
Upstream 100 bases:
>100_bases GACCGGCACGATCGGCGCAATGACGTACTACGCGGCGAAAGCGATTCGCGAGACCTATCTGAAGAATCCCGGCCCGCTGG TCGAGGCATGAGCGGCCATC
Downstream 100 bases:
>100_bases ACTCGCGATGCCCGCGTCGTAATTGCGCGTAAGACGTGAGCAACCGAAGCTCAGGGCATCGACCGATGCCCTGAGCTTTG CGTGTGGAACAGCAAACAGC
Product: putative cytochrome c
Products: NA
Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MNMIPDRLKQYLIPVFALICSGTPGAANAQAPGTVPAPTTVDAQLAQGAYLAKAGDCAACHTANKAQPFAGGLPLATPFG TLYSTNITPDASTGIGSYSYDDFATALRQGIAKDGHRLYPAMPYPSYAKIDDADMHALYRYFTQGVKPVEQTNRASALRF PFNVRVLMSIWDRWYAHDHPAYRADPHQSVEWNRGAYLVQGLAHCGACHTPHGMLGQETALDDKDNTVFLSGNTLAGWYA PNLRGHPLQTSDSSKVSGKADLVAYLRSGRLHDGAAFGPMTEVIDDSTQYLHDDDLNAIATYLTSPALQARATPTVAPQT TYTDRTASALRAGHVDSAGARLYLDNCAACHRTDGTGAMPAFPSLNGNAAVLSDDPASLIHIVLSGSHMPSTAAAPTPLA MPDFGWRLTDRQIADLLSFVRGSWGNRATDVSAAEVAKVRAVTVGAK
Sequences:
>Translated_447_residues MNMIPDRLKQYLIPVFALICSGTPGAANAQAPGTVPAPTTVDAQLAQGAYLAKAGDCAACHTANKAQPFAGGLPLATPFG TLYSTNITPDASTGIGSYSYDDFATALRQGIAKDGHRLYPAMPYPSYAKIDDADMHALYRYFTQGVKPVEQTNRASALRF PFNVRVLMSIWDRWYAHDHPAYRADPHQSVEWNRGAYLVQGLAHCGACHTPHGMLGQETALDDKDNTVFLSGNTLAGWYA PNLRGHPLQTSDSSKVSGKADLVAYLRSGRLHDGAAFGPMTEVIDDSTQYLHDDDLNAIATYLTSPALQARATPTVAPQT TYTDRTASALRAGHVDSAGARLYLDNCAACHRTDGTGAMPAFPSLNGNAAVLSDDPASLIHIVLSGSHMPSTAAAPTPLA MPDFGWRLTDRQIADLLSFVRGSWGNRATDVSAAEVAKVRAVTVGAK >Mature_447_residues MNMIPDRLKQYLIPVFALICSGTPGAANAQAPGTVPAPTTVDAQLAQGAYLAKAGDCAACHTANKAQPFAGGLPLATPFG TLYSTNITPDASTGIGSYSYDDFATALRQGIAKDGHRLYPAMPYPSYAKIDDADMHALYRYFTQGVKPVEQTNRASALRF PFNVRVLMSIWDRWYAHDHPAYRADPHQSVEWNRGAYLVQGLAHCGACHTPHGMLGQETALDDKDNTVFLSGNTLAGWYA PNLRGHPLQTSDSSKVSGKADLVAYLRSGRLHDGAAFGPMTEVIDDSTQYLHDDDLNAIATYLTSPALQARATPTVAPQT TYTDRTASALRAGHVDSAGARLYLDNCAACHRTDGTGAMPAFPSLNGNAAVLSDDPASLIHIVLSGSHMPSTAAAPTPLA MPDFGWRLTDRQIADLLSFVRGSWGNRATDVSAAEVAKVRAVTVGAK
Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 cytochrome c domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR008168 - InterPro: IPR014353 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: =1.1.99.3 [H]
Molecular weight: Translated: 47606; Mature: 47606
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIPDRLKQYLIPVFALICSGTPGAANAQAPGTVPAPTTVDAQLAQGAYLAKAGDCAAC CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEECCCCCHHH HTANKAQPFAGGLPLATPFGTLYSTNITPDASTGIGSYSYDDFATALRQGIAKDGHRLYP CCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECC AMPYPSYAKIDDADMHALYRYFTQGVKPVEQTNRASALRFPFNVRVLMSIWDRWYAHDHP CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCC AYRADPHQSVEWNRGAYLVQGLAHCGACHTPHGMLGQETALDDKDNTVFLSGNTLAGWYA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEC PNLRGHPLQTSDSSKVSGKADLVAYLRSGRLHDGAAFGPMTEVIDDSTQYLHDDDLNAIA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHCCCCHHHHH TYLTSPALQARATPTVAPQTTYTDRTASALRAGHVDSAGARLYLDNCAACHRTDGTGAMP HHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHCCCCCCCCCC AFPSLNGNAAVLSDDPASLIHIVLSGSHMPSTAAAPTPLAMPDFGWRLTDRQIADLLSFV CCCCCCCCEEEECCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHH RGSWGNRATDVSAAEVAKVRAVTVGAK HCCCCCCCCCCHHHHHHHEEEEEECCC >Mature Secondary Structure MNMIPDRLKQYLIPVFALICSGTPGAANAQAPGTVPAPTTVDAQLAQGAYLAKAGDCAAC CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEECCCCCHHH HTANKAQPFAGGLPLATPFGTLYSTNITPDASTGIGSYSYDDFATALRQGIAKDGHRLYP CCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECC AMPYPSYAKIDDADMHALYRYFTQGVKPVEQTNRASALRFPFNVRVLMSIWDRWYAHDHP CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCC AYRADPHQSVEWNRGAYLVQGLAHCGACHTPHGMLGQETALDDKDNTVFLSGNTLAGWYA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEC PNLRGHPLQTSDSSKVSGKADLVAYLRSGRLHDGAAFGPMTEVIDDSTQYLHDDDLNAIA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHCCCCHHHHH TYLTSPALQARATPTVAPQTTYTDRTASALRAGHVDSAGARLYLDNCAACHRTDGTGAMP HHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHCCCCCCCCCC AFPSLNGNAAVLSDDPASLIHIVLSGSHMPSTAAAPTPLAMPDFGWRLTDRQIADLLSFV CCCCCCCCEEEECCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHH RGSWGNRATDVSAAEVAKVRAVTVGAK HCCCCCCCCCCHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9352901 [H]